KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:22 2014 Check: 00 .. Name: ENSTTRP00000005690/1-1083 Len: 1110 Check: 2216 Weight: 1.00 Name: ENSP00000370242/1-1092 Len: 1110 Check: 7430 Weight: 1.00 Name: BACU012640/1-963 Len: 1110 Check: 7344 Weight: 1.00 Name: bmy_18505T0/1-865 Len: 1110 Check: 4496 Weight: 1.00 Name: ENSBTAP00000018367/1-1089 Len: 1110 Check: 6566 Weight: 1.00 // 1 50 ENSTTRP00000005690/1-1083 --SPSELTQI EDPREQWR-R EQERMLKEYL IVAQEALNAK KEIYQIKQQR ENSP00000370242/1-1092 MDHINKLTQI EDPREQWR-R EQERMLKEYL IVAQEALNAK KEIYQIKQQR BACU012640/1-963 ---------M PGCSCEWNIK EFGLAVKDLD FRVTWGKQFR TRICVMVDLE bmy_18505T0/1-865 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018367/1-1089 MDHINKLTQI EDPREQWR-R EQERMLKEYL IVAQEALNAK KEIYQIKQQR 51 100 ENSTTRP00000005690/1-1083 FELAQEEYQQ LHKMCEDDGR SYASSFFGYS TNTKYDPYQI KAEIASRRDR ENSP00000370242/1-1092 FELAQEEYQQ LHKMCEDDSR SYASSFSGYS TNTKYDPHQI KAEIASRRDR BACU012640/1-963 LEMQAGDFPE ---------- ---------- ---------- ---------- bmy_18505T0/1-865 MDFS------ ---------- ---------- ---------- ---------- ENSBTAP00000018367/1-1089 FELAQEEYQQ LHKMCEDDSR SYTSSFSGYS TNTKYDPYQI KAEIASRRDR 101 150 ENSTTRP00000005690/1-1083 LSRLKRELTQ MKQELQYKEK GVETLQ-EID RKMSSAHTNY KLDEAQAIMS ENSP00000370242/1-1092 LSRLKRELTQ MKQELQYKEK GVETLQ-EID RKMSSTHTSY KLDEAQAIMS BACU012640/1-963 ----KEFILF LDQSLFFSPE GFQSLGLRID RKMSSAHTNY KLDEAQAIMS bmy_18505T0/1-865 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018367/1-1089 LSRLKRELTQ MKQELQYKEK GVETLQ-EID RKMSNAHTNY KLDEAQAIMS 151 200 ENSTTRP00000005690/1-1083 ELRTIKKAIC TGEKERRDLM QSLAKLTDGF RNSCSLTDPL QEFPPSAGAL ENSP00000370242/1-1092 ELRTIKKAIC TGEKERRDLM HSLAKLTDSF KNSCSVTDSL VDFPHHVGVP BACU012640/1-963 ELRTIKK--- ---------- -SLAKLTDGF RNSCSLTDPL QEFPPSAGAL bmy_18505T0/1-865 ---------- ---------- ---------- ---VSLS--- ---------- ENSBTAP00000018367/1-1089 ELRTIKKAIY TGEKERRDLM QSLAKLTDGF RNSCSLTDPL QEFPPGAGAL 201 250 ENSTTRP00000005690/1-1083 GES-LPHQFC DAGSQTEVIG EFVFDDKTRL VDRVRLNWQY EEARKXXXXX ENSP00000370242/1-1092 GDAGVPQQFC DAGSQTDIIG EFVFDDKTRL VDRVRLNWQY EEARK-RVAN BACU012640/1-963 GES-LPHQFC DAGSQTEVIG EFVFDDKTRL VDRVRLNWQY EEARK-RVSN bmy_18505T0/1-865 ---------- ---------- ---------- ---------- ----R-RVSN ENSBTAP00000018367/1-1089 GES-LSHQFC DAGSQTDIIG EFIFDDKTRL VDRVRLNWQY EEARK-RVSN 251 300 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000370242/1-1092 IQQQLARLDN ESWPSTAEAD RDRLQLIKEK EALLQELQLI IAQRRSAGDV BACU012640/1-963 IQQQLAQFES ESWPGMAEAD RDRLQLIKEK EALLQELQLI IQQRRPAEDV bmy_18505T0/1-865 IQQQLAQFES ESWPGMAEAD RDRLQLIKEK EALLQELQLI IQQRRPAEDV ENSBTAP00000018367/1-1089 IQQQLAQLES ESWPGLAEAD RDRLQLVKEK EALLQELQLI IQQRRPAEDV 301 350 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXSRAT SVQGATEXXX XXXXXXXXXX XXXXXXXXXX ENSP00000370242/1-1092 ARLEEERERL EEELRRARAT SAQGATERIL LQEKRNCLLM QLEEATRLTS BACU012640/1-963 ARLEEERRRL EEEIQRSRAT SVQGATE--- ---------- ---------- bmy_18505T0/1-865 ARLEEERRRL EEEIQRSRAT SVQGATERIL LQEKRNCLLM QLEEATRLTS ENSBTAP00000018367/1-1089 VRLEEERRRL EEEIQRARAT SMQGATERIL LQEKRNCLLM QLEEATRLTS 351 400 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000370242/1-1092 YLQSQLKSLC ASTLTVSSGS SRGSLASSRG SLASSRGSLS SVSFTDIYGL BACU012640/1-963 -------SLS ASTLTVSSGS SRGSLASSRG SLASSRGSLS SVSFTDIYGL bmy_18505T0/1-865 YLQSQLQSLS ASTLTVSSGS SRGSLASSRG SLASSRGSLS SVSFTDIYGL ENSBTAP00000018367/1-1089 YLQSQLQSLS ASTLTMSSGS SRGSLASSRG SLASSRGSLS SVSFTDIYGL 401 450 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000370242/1-1092 PQYEKPDAEG SQLLRFDLIP FDSLGRDAPF SEPPGPSGFH KQRRSLDTPQ BACU012640/1-963 PQYEKPDAEG GPLLRFDLVS FSSLGRDAPL ADAPGPAGLH KQRRSLDTPQ bmy_18505T0/1-865 PQYEKPDAEG GPLLRFDLVS FDSLGRDAPL AEAPGPAGLH KQRRSLDTPQ ENSBTAP00000018367/1-1089 PQYDKPDTEG GPLLRFDLVP FDSLGRDVGL ADTAGPPGLH KPRHSLDTPQ 451 500 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000370242/1-1092 SLASLSSRSS LSSLSPPSSP LDTPFLPASR DSPLAQLADS CEGPGLGALD BACU012640/1-963 SLASLSSRSS LSSLSPPSSP LDTPFLPASR DSPLAQLGDA FEVAGL---- bmy_18505T0/1-865 SLASLSSRSS LSSLSPPSSP LDTPFLPASR DSPLAQLGDA FEVAGLGALD ENSBTAP00000018367/1-1089 SLASLSSRSS LSSLSPPSSP LDTPFLPASR DSPLAQLGDG FEVAGLGTLD 501 550 ENSTTRP00000005690/1-1083 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXATP ENSP00000370242/1-1092 RLRAHASAMG DEDLPGMAAL QPHGVPGDGE GPHERGPPPA SAPVGGTVTL BACU012640/1-963 ---------- -DSTSGKKKL SPDAA-GRSH LPNVLSPVPV ---TKVAVTP bmy_18505T0/1-865 RLRAQASALG DEDPPGAASL PPHGCPGDGE GPRERGPQAA AAPTAAPVTP ENSBTAP00000018367/1-1089 RLRAQAAALG DEDLAGAAAL PPHGCPGDGE GSHERGPQVA TAPTAAVVTL 551 600 ENSTTRP00000005690/1-1083 REDSAQRLER RARCVSACLS DYSLASDSGV FEPPTKRSED ADDPARGDAC ENSP00000370242/1-1092 REDSAKRLER RARRISACLS DYSLASDSGV FEPLTKRNED AEEPAYGDTA BACU012640/1-963 REDSAQRLEW RVRCVSACLS DYLLASDSGM FEPATKRSED ADEPVPGDAC bmy_18505T0/1-865 REDSAQRLER RVRCVSACLS DYSLASDSGV FEPPTKRSED ADEPVPGDAC ENSBTAP00000018367/1-1089 REDSAQRLEH RPCRMSICLS DYSLASDSGV FEPPNKRSED ADEPVRGDAC 601 650 ENSTTRP00000005690/1-1083 GN-GPQXLI- -LHDSASECL LVNVLQLKNF AGLVVKEDCK IHIRVYLPPL ENSP00000370242/1-1092 SNGDPQIHVG LLRDSGSECL LVHVLQLKNP AGLAVKEDCK VHIRVYLPPL BACU012640/1-963 GNEGPQIHVG FLHDSASECL LVNVLQLKNF AGLVVKEDCK IHIRVYLPPL bmy_18505T0/1-865 GNEGPQIHVG FLHDSASECL LVNVLQLKNF AGLVVKEDCK IHIRVYLPPL ENSBTAP00000018367/1-1089 SNEGPQIHVG FLLDRANECL LVNVLQLKNF AGLMVKEDCK IHIRVYLPPL 651 700 ENSTTRP00000005690/1-1083 DSGTPNTYCS KALELQAPLI FNEVFRIPVH SSMVTLKSLQ LYVCSVNPQL ENSP00000370242/1-1092 DSGTPNTYCS KALEFQVPLV FNEVFRIPVH SSALTLKSLQ LYVCSVTPQL BACU012640/1-963 DSGTPNTYCS KALELQAPLI FNEVFRIPVH SSMVTLKSLQ LYVCSVNPQL bmy_18505T0/1-865 DSGTPNTYCS KALELQAPLI FNEVFRIPVH SSMVTLKSLQ LYVCSVNPQL ENSBTAP00000018367/1-1089 DSSTPNTYCS KALELQAPLV FNEVFRIPVH SSMVTLKSLQ LYVCSVNPQL 701 750 ENSTTRP00000005690/1-1083 QEELLGIAQI NLADYDGSSE MQLRWYSVQV FTGPEPPR-R EDERLGHSDS ENSP00000370242/1-1092 QEELLGIAQI NLADYDSLSE MQLRWHSVQV FTSSEPSRTR EAGCAGESSA BACU012640/1-963 QEELLGIAQI NLADYDGSSE MQLCWYSVQV FTGPEPPR-R EDERLGHSDF bmy_18505T0/1-865 QEELLGIAQI NLADYDGSSE MQLRWYSVQV FTGPEPPR-Q EDERLGHSDF ENSBTAP00000018367/1-1089 QEELLGIAQI NLTDYD-SSE MQLRWYSVQV FTGPEPPR-R EEERPGDCAA 751 800 ENSTTRP00000005690/1-1083 RDPVAA--TS GKTDAVTVLL ARTTAQLQAV ERELAEERVK LEYTEEEVVE ENSP00000370242/1-1092 RDPAHTISIS GKTDAVTVLL ARTTAQLQAV ERELAEERAK LEYTEEEVLE BACU012640/1-963 QDPAPT--TS GKTDVVTVLL VRTRAQLQAV ERELAEERVK LEYTEEEILE bmy_18505T0/1-865 RDPAPT--TS GKTDAVTVLL ARTTAQLQAV ERELAEERVK LEYTEEEILE ENSBTAP00000018367/1-1089 QDLTLA--AC RKTDAVTVLL ARTTAQLQAV ERELAEERVK LEYTEEEILE 801 850 ENSTTRP00000005690/1-1083 MERRAEQAEA VSERSWQADS VDSGCSSCAQ TSPPHPEPCC VGVSSIHGHT ENSP00000370242/1-1092 MERKEEQAEA ISERSWQADS VDSGCSNCTQ TSPPYPEPCC MGIDSILGHP BACU012640/1-963 MERKEEQAEA VSERSWQADS VDSGCSSCAQ TRPPHPEPCC VAVSSIHGHA bmy_18505T0/1-865 MERKEEQAEA VSERSWQADS VDSGCSSCAQ TSPPHPEPCC VAVSSIHGHT ENSBTAP00000018367/1-1089 MERKEEQAEA VSERSWQADS VDSGCSSCAQ TSPPHPEPCC VGVDSIHGHT 851 900 ENSTTRP00000005690/1-1083 FAGQADPYGP EKLQPPPLKV DKE-NTEDLF PEEVASLPKE SLGRRARGSP ENSP00000370242/1-1092 FAAQAGPYSP EKFQPSPLKV DKETNTEDLF LEEAASLVKE RPSRRARGSP BACU012640/1-963 FAGQADPYGP EKLQPPPLKV DKETNTEDLF PEEVASLPKE RPGRRARGSP bmy_18505T0/1-865 FAGQADPYGP EKLQPPPLKV DKETNTEDLF PEEVASLPKE RPGRRARGSP ENSBTAP00000018367/1-1089 FAGQADPYSP EKLQPPALKV DKETNTEDLF PEEVASLRKE RPSRRARGSP 901 950 ENSTTRP00000005690/1-1083 FTRSSTIVRS QTFSPGARSQ YVCRLYRSDS DSSTLPRKSP FVRNTLER-R ENSP00000370242/1-1092 FVRSGTIVRS QTFSPGARSQ YVCRLYRSDS DSSTLPRKSP FVRNTLER-R BACU012640/1-963 FTRSSTIVRS QTFSPAARSQ YVCRLYRSDS DSSTLPRKSP FVRNTLER-R bmy_18505T0/1-865 FTRSSTIVRS QTFSPGARSQ YVCRVSR--- ESFATCLEGF FIVGSVTRGR ENSBTAP00000018367/1-1089 FVRSSTIVRS QTFSPGARSQ YVCRLYRSDS DSSTLPRKSP FVRNTLER-R 951 1000 ENSTTRP00000005690/1-1083 TLR------- -----YKQPC RSSLAALAAR TSLDLELDLQ ASRTRQRQLN ENSP00000370242/1-1092 TLR------- -----YKQSC RSSLAELMAR TSLDLELDLQ ASRTRQRQLN BACU012640/1-963 TLR------- -----YKQPC RSSLAALAAR TSLDLELDLQ ASRTRQRQLN bmy_18505T0/1-865 SCRQGAGGVG ALTAAVSQPC RSSLAALAAR TSLDLELDLQ ASRTRQRQLN ENSBTAP00000018367/1-1089 TLR------- -----YKQPC RSSLAALAAR TSLDLELDLQ ASRTRQRQLN 1001 1050 ENSTTRP00000005690/1-1083 EELCALRELR QRLEDAQLRG HAEPPAWLLR DERFRSLLRE AERQTRQTKL ENSP00000370242/1-1092 EELCALRELR QRLEDAQLRG QTDLPPWVLR DERLRGLLRE AERQTRQTKL BACU012640/1-963 EELCALRELR QRLEDAQLRG HAEPPA---C TRKWRAKL-- -ESPLLSAMC bmy_18505T0/1-865 EELCALRELR QRLEDAQLRG HAEPPAWLLR DERFRSLLRE AERQTRQTQL ENSBTAP00000018367/1-1089 EELCALRELR QRLEDAQLRG HTDLPAWLLR DERFRSLLRE AERQTRQTKL 1051 1100 ENSTTRP00000005690/1-1083 DFHQEQAAEK MLKKASKGVC QLRGQNLKEP IQVQAF--RE KIAFFTRPRI ENSP00000370242/1-1092 DYRHEQAAEK MLKKASKEIY QLRGQSHKEP IQVQTF--RE KIAFFTRPRI BACU012640/1-963 TFSSEHC--- FFHAACNHSV ---GSSLHLA LFKLKY-PME KIAFFTRPRI bmy_18505T0/1-865 DFHQEQAAEK MLKKASKGVC QLRGQNLKEP IQVQAF--RE KIAFFTRPRI ENSBTAP00000018367/1-1089 DFHQEQAAEK MLKKASKGVC QLRGQNLKEP IQVQTFSPRE KIAFFTRPRI 1101 1150 ENSTTRP00000005690/1-1083 NVPPLPADDV ENSP00000370242/1-1092 NIPPLPADDV BACU012640/1-963 NVPPLPADDV bmy_18505T0/1-865 NVPPLPADDV ENSBTAP00000018367/1-1089 NVPPLPADDV