KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:22 2014 Check: 00 .. Name: ENSP00000321810/1-467 Len: 474 Check: 5673 Weight: 1.00 Name: ENSBTAP00000018380/1-467 Len: 474 Check: 2298 Weight: 1.00 Name: bmy_02089T0/1-437 Len: 474 Check: 7254 Weight: 1.00 Name: BACU000406/1-467 Len: 474 Check: 1434 Weight: 1.00 Name: ENSTTRP00000004778/1-467 Len: 474 Check: 2446 Weight: 1.00 // 1 50 ENSP00000321810/1-467 MASVAAARAV PVGSGLRGLQ RTLPLVVILG ATGTGKSTLA LQLGQRLGGE ENSBTAP00000018380/1-467 MAAAAAARAV SVGPGLQSLQ RTLPLVVILG ATGTGKSTLA LQLGQRLGGE bmy_02089T0/1-437 MAAVAAARAV SAGPGLRGLK RTLPLVVILG ATGTGKSTLA LQLGQRLGGE BACU000406/1-467 MAAVAAARAV SAGPGLRGLK RTPPLVVILG ATGTGKSTLA LQLGQRLGGE ENSTTRP00000004778/1-467 MAAVAAARAV SAGPGLRGLK RTLPLVVILG ATGTGKSTLA LQLGQRLGGE 51 100 ENSP00000321810/1-467 IVSADSMQ-- -----VYEGL DIITNKVSAQ EQRICRHHMI SFVDPLVTNY ENSBTAP00000018380/1-467 IVSADSMQ-- -----VYEGL DIITNKVSAQ EQRLCQHHMI SFVDPLVMNY bmy_02089T0/1-437 IVSADSMQVP GFRSVVYEGL DIITNKVSAQ EQRMCQHHMI GFVDPLVTNY BACU000406/1-467 IVSADSMQ-- -----VYEGL DIITNKVSAQ EQSLCQHHMI GFVDPLVTNY ENSTTRP00000004778/1-467 IVSADSMQ-- -----VYEGL DIITNKVSAQ EQRMCRHHMI SFVDPLVTNY 101 150 ENSP00000321810/1-467 TVVDFRNRAT ALIEDIFARD KIPIVVGGTN YYIESLLWKV LVNTKPQEMG ENSBTAP00000018380/1-467 TVVDFRNKAT ALIEDIFARD KIPIVVGGTN YYIESLLWKV LVNAKPQEMG bmy_02089T0/1-437 TVTGWQGEEV Y----IFARD KIPIVVGGTN YYIESLLWKV LVNAKPWEMG BACU000406/1-467 TVVDFRNKAT ALIEDIFARD KIPIVVGGTN YYIESLLWKV LVNAKPWEMG ENSTTRP00000004778/1-467 TVVDFRNKAT ALIEDIFSRD KIPIVVGGTN YYIEALLWKV LVNAKPWEMG 151 200 ENSP00000321810/1-467 TEKVIDRKVE LEKEDGLVLH KRLSQVDPEM AAKLHPHDKR KVARSLQVFE ENSBTAP00000018380/1-467 TEKVIDRKVE LEKEDGHVLH KRLSQVDPEM AAKLHPHDKR KVARSLQVFE bmy_02089T0/1-437 TEKVIDQKVE LEKEDGHALH KRLSQVDPEM AAKLHPHDKR KVARSLQVFE BACU000406/1-467 TEKVIDKKVE LEKEDGHALH KRLSQVDPEM AAKLHPHDKR KVARSLQVFE ENSTTRP00000004778/1-467 TEKVIDQKVE LEKEDGHALH KRLSQVDPEM AAKLHPHDKR KVARSLQVFE 201 250 ENSP00000321810/1-467 ETGISHSEFL HRQHTEEGGG PLGGPLKFSN PCILWLHADQ AVLDERLDKR ENSBTAP00000018380/1-467 ETGISHSEFL HRQHAEEGGG PLGGPLKFPN PCILWLHAEQ TVLDERLDKR bmy_02089T0/1-437 ETGISHSEFL HRQHAEEGGG PLGGPLKFPN PCILWLHAEQ TVLDERLDKR BACU000406/1-467 ETGISHSEFL HRQHAEEGGG PLGGPLRFPN PCILWLHAEQ TVLDERLDKR ENSTTRP00000004778/1-467 ETGISHSEFL HRQHSEEGGG PLGGPLKFPN PCILWLHAEQ TVLDERLDKR 251 300 ENSP00000321810/1-467 VDDMLAAGLL EELRDFHRRY NQKNVSENSQ DYQHGIFQSI GFKEFHEYLI ENSBTAP00000018380/1-467 VDNMLAAGLL DELRDFHKRY NEKKVAENGQ DYQHGIFQSI GFKEFHEYLI bmy_02089T0/1-437 VDNMLAAGLL DELRDFHKRY NEKKVVENSK ---------- ---------- BACU000406/1-467 VDNMLAAGLL DELRDFHKRY NEKKVVENSQ DYQHGIFQSI GFKEFHEYLI ENSTTRP00000004778/1-467 VDNMLAAGLL DELRDFHRRY NEKKIVENSQ DYQHGIFQSI GFKEFHEYLI 301 350 ENSP00000321810/1-467 TEGKCTLETS NQLLKKGIEA LKQVTKRYAR KQNRWVKNRF LSRPGPIVPP ENSBTAP00000018380/1-467 TEGKCTPEIR NQLLKKGIEA LKQVTKRYAR KQNRWVKNRF LSRPGTSVPP bmy_02089T0/1-437 ---------- ---VRSGIEA LKQVTKRYAR KQNRWIKNRF LSRPGPSVPP BACU000406/1-467 TEGKCTPETR NQLLKEGIEA LKQVTKRYAR KQNRWIKNRF LSRPGPSVPP ENSTTRP00000004778/1-467 TEGKCTPETR NQLLKKGIEA LKQVTKRYAR KQNRWIKNRF LSRPGPSVPP 351 400 ENSP00000321810/1-467 VYGLEVSDVS KWEESVLEPA LEIVQSFIQG HKPTATPIKM PYNEAENKRS ENSBTAP00000018380/1-467 VYGLEVSDVS KWEESVLEPA LEIVRSFIQG HKPAATPVKM PGSETENKRS bmy_02089T0/1-437 VYGLEASDVS KWEESVLEPA LEIVRSLIQG HKPAATPVKM PSSETXNKRS BACU000406/1-467 VYGLEASDVS KWEESVLEPA LEIVRSLIQG HKPAATPVKM PSSETENKRS ENSTTRP00000004778/1-467 VYGLEVSDVS KWEESVLEPA LEIVRSFIQG HKPAATPVKM PSSETENKRS 401 450 ENSP00000321810/1-467 YHLCDLCDRI IIGDREWAAH IKSKSHLNQL KKRRRLDSDA VNTIESQSVS ENSBTAP00000018380/1-467 YHMCELCDRI IIGDREWAAH MKSKSHLHQL KKRRRLDSDA VTTVESQSVS bmy_02089T0/1-437 YHMCDLCDRI IIGDREWAAH MKSKSHLHQL KKRRRLDSDA ITTIESQSIS BACU000406/1-467 YHMCDLCDRI IIGDREWAAH MKSKSHLHQL KKRRRLDSDA ITTIESQSIS ENSTTRP00000004778/1-467 YHMCDLCDRI IIGDREWAAH MKSKSHLHQL KKRRRLDSDA ITTIESQSIS 451 500 ENSP00000321810/1-467 PDHNKEPKEK GSPGQNDQEL KCSV ENSBTAP00000018380/1-467 PDHDKELKEK ESLGQNDKEL KASI bmy_02089T0/1-437 PDHDKELKEK GSLGQNDEEL KSSI BACU000406/1-467 PDHDKELKEK GYLGQNDEEL KSSV ENSTTRP00000004778/1-467 PDHDKELKEK GSLGQNDEEL KSSV