KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:26 2014 Check: 00 .. Name: ENSTTRP00000015407/1-666 Len: 799 Check: 8322 Weight: 1.00 Name: bmy_18737T0/1-697 Len: 799 Check: 3617 Weight: 1.00 Name: ENSBTAP00000018400/1-584 Len: 799 Check: 4214 Weight: 1.00 Name: ENSP00000299601/1-666 Len: 799 Check: 7543 Weight: 1.00 Name: BACU016369/1-666 Len: 799 Check: 6116 Weight: 1.00 // 1 50 ENSTTRP00000015407/1-666 MADMEDLFGS DADSDAERKD ---------- ---------- ---------- bmy_18737T0/1-697 MADMEDLFGS DADSDAERKG GVGWAWGEAS VAGLLRRELD SGPVPGLRAL ENSBTAP00000018400/1-584 MADMEDLFGS DADSDPERKD ---------- ---------- ---------- ENSP00000299601/1-666 MADMEDLFGS DADSEAERKD ---------- ---------- ---------- BACU016369/1-666 MADMEDLFGS DADSDAERKD ---------- ---------- ---------- 51 100 ENSTTRP00000015407/1-666 ---------- ---------- ------SDSG SGSDSDQENV ASGS------ bmy_18737T0/1-697 RRRGRVVALP PLLLQLPLHS RRCQPPPTEG GNEVTDAECV PRGSWCPWNK ENSBTAP00000018400/1-584 ---------- ---------- ------SDSG SGSDSDQENV ASGS------ ENSP00000299601/1-666 ---------- ---------- ------SDSG SDSDSDQENA ASGS------ BACU016369/1-666 ---------- ---------- ------SDSG SGSDSDQENV ASGS------ 101 150 ENSTTRP00000015407/1-666 ---NASG--- ---------- ---------- ---------- ---------- bmy_18737T0/1-697 PCLGACGAKG ARGRGGGRAS QRSRRRNLGV LLCPALHRPA QKRGVLGSLR ENSBTAP00000018400/1-584 ---NASG--- ---------- ---------- ---------- ---------- ENSP00000299601/1-666 ---NASG--- ---------- ---------- ---------- ---------- BACU016369/1-666 ---NASG--- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000015407/1-666 ---------- ---------- ---SESDQDE RDDSGKPSNK ELFGDDSEDE bmy_18737T0/1-697 CLGEEIGKDT EVTVGPERRM DVASESDQDE RDDSGKPSNK ELFGDDSEDE ENSBTAP00000018400/1-584 ---------- ---------- ---SESDQDE RDDAGKPSNK ELFGDDSEDE ENSP00000299601/1-666 ---------- ---------- ---SESDQDE RGDSGQPSNK ELFGDDSEDE BACU016369/1-666 ---------- ---------- ---SESDQDE RDDSGKPSNK ELFGDDSEDE 201 250 ENSTTRP00000015407/1-666 GASHHSGSDN HSEGSDNRSE ASERSDHEDN DPSDVDQHSG SEAH--NDDD bmy_18737T0/1-697 GASHHSGSDN HSEGSDNRSE ASEHSDHEDN DPSDVDQHSG SEAH--NDDD ENSBTAP00000018400/1-584 GASHHSGSDN HSEGSDNRSE ASEHSDHEDN DPSDVDQHSG SETRNDNDDE ENSP00000299601/1-666 GASHHSGSDN HSERSDNRSE ASERSDHEDN DPSDVDQHSG SEAP--NDDE BACU016369/1-666 GASHHSGSDN HSEGSDNRSE ASERSDHEDN DPSDVDQHSG SEAH--NDDD 251 300 ENSTTRP00000015407/1-666 DEGHRSDGGS HHSEAEGSEK AHSDDEKWCR EDKSDQSDDE KIQNSDDEER bmy_18737T0/1-697 DEGHRSDGGS HHSEAEGSEK AHSDDEKWGR EDKSDQSDDE KIQNSDDEER ENSBTAP00000018400/1-584 DEGHRSDGGS HHSEAEGSEK AHSDDEKWGR EDKSDQSDDE KIQNSDDEER ENSP00000299601/1-666 DEGHRSDGGS HHSEAEGSEK AHSDDEKWGR EDKSDQSDDE KIQNSDDEER BACU016369/1-666 DEGHRSDGGS HHSEAEGSEK AHSDDEKWGR EDKSDQSDDE KIQNSDDEER 301 350 ENSTTRP00000015407/1-666 AQGSDEDKLQ NSDDDEKMQN TDDEERPQLS DDERQQLSEE EKANSDDERP bmy_18737T0/1-697 AQGSDEDKLQ NSDDDEKMQN XDDEERPQLS DDERQQLSEE EKANSDDERP ENSBTAP00000018400/1-584 AQGSDEDKLQ NSDDDEKMQN TDDEERPQLS EDERQQLSEE EKANSDDERP ENSP00000299601/1-666 AQGSDEDKLQ NSDDDEKMQN TDDEERPQLS DDERQQLSEE EKANSDDERP BACU016369/1-666 AQGSDEDKLQ NSDDDEKMQN TDDEERPQLS DDERQQLSEE EKANSDDERP 351 400 ENSTTRP00000015407/1-666 AASDNDDEKQ NSDDEERPQM SDEEKMQNSD DERPQASDEE HRHSDDEEEQ bmy_18737T0/1-697 AASDNDDEKQ NSDDEERPQM SDDEKMQNSD DERPQASDEE HRHSDDEEEQ ENSBTAP00000018400/1-584 VASDNDDEKQ NSDDEERPQI SDEEKMQNSD DERPQPSDEE HRHSDDEEEQ ENSP00000299601/1-666 VASDNDDEKQ NSDDEEQPQL SDEEKMQNSD DERPQASDEE HRHSDDEEEQ BACU016369/1-666 AASDNDDEKQ NSDDEERPQM SDDEKMQNSD DERPQASDEE HRHSDDEEEQ 401 450 ENSTTRP00000015407/1-666 DHKSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX NSGTMDLFGG bmy_18737T0/1-697 DHKSESARGS DSEDEVLRMK RKNAIASDSE ADSDTEVPKD NSGTMDLFGG ENSBTAP00000018400/1-584 DHKSESARGS DSEDEVLRMK RKNAIASDSE AESDTEVPKD NSGTMDLFGG ENSP00000299601/1-666 DHKSESARGS DSEDEVLRMK RKNAIASDSE ADSDTEVPKD NSGTMDLFGG BACU016369/1-666 DHKSESARGS DSEDEVLRMK RKNAIASDSE ADSDTEVPKD NSGTMDLFGG 451 500 ENSTTRP00000015407/1-666 ADDISSGSDG EDKPPTPGQP VDENGLPQDQ QEEEPIPETR IEVEIPKVNT bmy_18737T0/1-697 ADDISSGSDG EDKPPTPGQP V--------- ---------- ---------- ENSBTAP00000018400/1-584 ADDISSGSDG EDKPPTPGQP VDENGLPQDQ QEEEPIPETR IEVEIPKVNT ENSP00000299601/1-666 ADDISSGSDG EDKPPTPGQP VDENGLPQDQ QEEEPIPETR IEVEIPKVNT BACU016369/1-666 ADDISSGSDG EDKPPTPGQP VDENGLPQDQ QEEEPIPETR IEVEIPKVNT 501 550 ENSTTRP00000015407/1-666 DLGNDLYFVK LPNFLSVEPR PFDPQYYEDE FEDEEMLDEE GRTRLKLKVE bmy_18737T0/1-697 ---------- LPNFLSVEPR PFDPQYYEDE FEDEEMLDEE GRTRLKLKVE ENSBTAP00000018400/1-584 DLGNDLYFVK LPNFLSVEPR PFDPQYYEDE FEDEEMLDEE GRTRLKLKVE ENSP00000299601/1-666 DLGNDLYFVK LPNFLSVEPR PFDPQYYEDE FEDEEMLDEE GRTRLKLKVE BACU016369/1-666 DLGNDLYFVK LPNFLSVEPR PFDPQYYEDE FEDEEMLDEE GRTRLKLKVE 551 600 ENSTTRP00000015407/1-666 NTIRWRIRRD EEGNEIKESN ARIVKWSDGS MSLHLGNEVF DVYKAPLQGD bmy_18737T0/1-697 NTIRWRIRRD EEGNEIKESN ARIVKWSDGS MSLHLGNEVF DVYKAPLQGD ENSBTAP00000018400/1-584 NTIRWRIRRD EEGNEIKESN ARIVKWSDGS MSLHLGNEVF DVYKAPLQGD ENSP00000299601/1-666 NTIRWRIRRD EEGNEIKESN ARIVKWSDGS MSLHLGNEVF DVYKAPLQGD BACU016369/1-666 NTIRWRIRRD EEGNEIKESN ARIVKWSDGS MSLHLGNEVF DVYKAPLQGD 601 650 ENSTTRP00000015407/1-666 HNHLFIRQGT GLQGQAVFKT KLTFRPHSTD SATHRKMTLS LADRCSKTQK bmy_18737T0/1-697 HNHLFIRQGT GLQGQAVFKT KLTF------ ---------- ---------- ENSBTAP00000018400/1-584 HNHLFIRQGT GLQGQAVFKT KLTFRPHSTD SATHRKMTLS LADRCSKTQK ENSP00000299601/1-666 HNHLFIRQGT GLQGQAVFKT KLTFRPHSTD SATHRKMTLS LADRCSKTQK BACU016369/1-666 HNHLFIRQGT GLQGQAVFKT KLTFRPHSTD SATHRKMTLS LADRCSKTQK 651 700 ENSTTRP00000015407/1-666 IRILPMAGRD PECQRTEMIK KEEERLRASI RRESQQRRMR EKQHQRGLSA bmy_18737T0/1-697 ---------- ---------- ---------- -RESQQRRMR EKQHQRGLSA ENSBTAP00000018400/1-584 IRILPMAGRD PECQRTEMIK KEEERLRASI RRESQQRRMR EKQHQRGLSA ENSP00000299601/1-666 IRILPMAGRD PECQRTEMIK KEEERLRASI RRESQQRRMR EKQHQRGLSA BACU016369/1-666 IRILPMAGRD PECQRTEMIK KEEERLRASI RRESQQRRMR EKQHQRGLSA 701 750 ENSTTRP00000015407/1-666 SYLEPDRYDE EEEGEESISL AAIKNRYKGG IREERARIYS SDSDEGSEED bmy_18737T0/1-697 SYLEPDRYDE EEEGEESISL AAIKNRYKGG IREERARIYS SDSDEGSEED ENSBTAP00000018400/1-584 SYLEPDRYDE EEEGG----- ---------- ---------- ---------- ENSP00000299601/1-666 SYLEPDRYDE EEEGEESISL AAIKNRYKGG IREERARIYS SDSDEGSEED BACU016369/1-666 SYLEPDRYDE EEEGEESISL AAIKNRYKGG IREERARIYS SDSDEGSEED 751 800 ENSTTRP00000015407/1-666 KAQRLLKAKK LTSDEEGEPS GKRKAEDDDK ANKKHKKYVI SDEEEEDDD bmy_18737T0/1-697 KAQRLLKAKK LTS----EPS GKRKAEDDDK ANKKHKKYVI SDEEEEDDD ENSBTAP00000018400/1-584 ---------- ---------- ---------- ---------- --------- ENSP00000299601/1-666 KAQRLLKAKK LTSDEEGEPS GKRKAEDDDK ANKKHKKYVI SDEEEEDDD BACU016369/1-666 KAQRLLKAKK LTSDEEGEPS GKRKAEDDDK ANKKHKKYVI SDEEEEDDD