KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:27 2014 Check: 00 .. Name: ENSP00000245908/1-576 Len: 579 Check: 4037 Weight: 1.00 Name: ENSBTAP00000018405/1-523 Len: 579 Check: 3532 Weight: 1.00 Name: bmy_21817T0/1-410 Len: 579 Check: 6913 Weight: 1.00 Name: BACU002559/1-579 Len: 579 Check: 8516 Weight: 1.00 Name: ENSTTRP00000005622/1-572 Len: 579 Check: 2176 Weight: 1.00 // 1 50 ENSP00000245908/1-576 MQVPQDGEDL AGQPWYHGLL SRQKAEALLQ QNGDFLVRAS GSRGGNPVIS ENSBTAP00000018405/1-523 MQVPQDGEDF VGQPWYHGPL SRQKAEDLLQ QDGDFLVRAS KSRGGHPVIS bmy_21817T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU002559/1-579 MQVPQDGEDF AGQPWYHGPL SRQKAEALLQ QDGDFLVRAS KSRGGHPVIS ENSTTRP00000005622/1-572 MQVPQDGEDF AGQPWYHGPL SRQKAEALLQ QDGDFLVRAS KSRGGHPVIS 51 100 ENSP00000245908/1-576 CRWRGSALHF EVFRVALRPR PGRPTALFQL EDEQFPSIPA LVHSYMTGRR ENSBTAP00000018405/1-523 CRWRGSALHF EVLRVALRPR PGRPTALFQL EDERFPSLPA LVRSYVIGQR bmy_21817T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU002559/1-579 CRWRGSVLHF EVFRVALRPR PGRPTALFQL EDERFPSLPA LVRSYVTGQR ENSTTRP00000005622/1-572 CRWRGSVLHF EVFRVALRPR PGRPTALFQL EDERFPSLPA LVRSYVTGQR 101 150 ENSP00000245908/1-576 PLSQATGAVV SRPVTWQGPL RRSFSEDTLM DGPARIEPLR ARKWSNSQPA ENSBTAP00000018405/1-523 PLSQATGAVA SRPVPRQGLI RRSFSEDTLP DDPARTEPLR DRKRSDSQPA bmy_21817T0/1-410 ---------- ---------- ---------- ---------- ---------- BACU002559/1-579 TLSQATGAVA SRPVTRQGPI RRSFSEDTLP DGPAWTEPLR ARKRSDSQPA ENSTTRP00000005622/1-572 TLSQATGAVA SRPVTRQGPI RRSFSEDTLP DGPAWTEPLR ARKRSDSQPA 151 200 ENSP00000245908/1-576 DLAHMGRSRE DPAGMEASTM PISALPRTSS DPVLLKAPAP LGTVADSLRA ENSBTAP00000018405/1-523 GLEHMWRSPE DPPGPGASTV PASGLPRTGS DPVILKTPVP LGSVADSLRA bmy_21817T0/1-410 ---------- ---------M PASALPRTGS DSVLLKVSVP LGSIADSLRA BACU002559/1-579 GLQHMEQPTE DHPGSGASTM PASALPRTGS DSVLLKVPVP LGSIADSLRA ENSTTRP00000005622/1-572 GLEHMGQPTE DHPGSGASTM PASALPRTGS DSVLLKVPVP LGSIADSLRA 201 250 ENSP00000245908/1-576 SDGQLQAKAP TKPPRTPSFE LPDASERPPT YCELVPRVPS VQGTSPSQSC ENSBTAP00000018405/1-523 SDGQLHAKAP TKPPRTPSLL LPDASGRPPT YCELVPRVLR FQGPPPGHSC bmy_21817T0/1-410 SDGQLHAKAP TKPPRTSLLM LPDASGRPPT YCELMPRVPR VQGTPPGHSC BACU002559/1-579 SDGQLHAKAP TKPPRTSSLM LPDASGRPPT YCELVPRVPG VQGTPPGHSC ENSTTRP00000005622/1-572 SDGQLHAKAP TKPPRTSSLM LPDASGCPPT YCELVPRVPR VQGTPAGHSC 251 300 ENSP00000245908/1-576 PEPEAPWWEA ---EEDEEEE NRCFTRPQAE ISFCPHDAPS CLLGPQNRPL ENSBTAP00000018405/1-523 PESEVPWWEA ----EEEKEE DRCFARPQAE VSFCLPDTPS CLLGSQNRPL bmy_21817T0/1-410 PEPEAPWWEA EEEEEEEEEE NRCFARPQAE VSFGPPDNPF CLLGSQNRPL BACU002559/1-579 PEPEAPWWEA EKEEEEEEEE NRCFARPQAE VSFCPPDNPF FLLGSQNRPL ENSTTRP00000005622/1-572 PEPEAPWWEA -------EEE DGCFARPQAE VSFCPPDNPF CLLGSQNRPL 301 350 ENSP00000245908/1-576 EPQVLHTLRG LFLEHHPGST ALHLLLVDCQ ATGLLGVTRD QRGNMGVSSG ENSBTAP00000018405/1-523 EPEVLHTLRG LFLEHHPGST ALHLLLVDCQ ATGVLGVTKA QRGAMGVASG bmy_21817T0/1-410 ETEVLHTLHG LFLEHHPGST ALHLLLVDCQ ATGLLGVTKA QRGAMGVASG BACU002559/1-579 ETEVLHTLHG LFLEHHPGST ALHLLLVDCQ ATGLLGVTKA QRGAMGVASG ENSTTRP00000005622/1-572 ETEVLHTLHG LFLEHHPGST ALHLLLVDCQ ATGLLGVTKA QRGAMGVASG 351 400 ENSP00000245908/1-576 LELLTLPHGH HLRLELLERH QTLALAGALA VLGCSGPLEE RAAALRGLVE ENSBTAP00000018405/1-523 LELLTLPHGH RLRLELLERL ETLALAGALA VLGCAGPLEE RAAALRGLVE bmy_21817T0/1-410 LELLTLPHGH RLRLELLERL ETLALAGALA VLGCAGPLEE RAAALRGLVE BACU002559/1-579 LELLTLPHGH RLRLELLERL ETLALAGALG VLGCAGPLEE RAAALRGLVE ENSTTRP00000005622/1-572 LELLTLPHGH RLRLELLERL ETLALAGALA VLGCAGPLEE RAAALRGLVE 401 450 ENSP00000245908/1-576 LALALRPGAA GDLPGLAAVM GALLMPQVSR LEHTWRQLRR SHTEAALAFE ENSBTAP00000018405/1-523 LAVALRPGAV GDLPGLAAVM GALLMPQVSR LERTWRHLRR SHTEAALAFE bmy_21817T0/1-410 LALALRPGAA GDLPGLAAVM GALLMPQVSR LERTWRQLRR SHTEAALAFE BACU002559/1-579 LALALRPGAA GDPPGLAAGM GALLMPQVSR LERTWRQLRR SHTEAALAFE ENSTTRP00000005622/1-572 LALALRPGAA GDLPGLAAVM GALLMPQVSR LERTWRQLRR SHTEAALAFE 451 500 ENSP00000245908/1-576 QELKPLMRAL DEGAGPCDPG EVALPHVAPM VRLLEGEEVA GPLDESCERL ENSBTAP00000018405/1-523 QELKPLMRSL NEGAGPSDPG EVALPHVAPA ARLLEGEELP GPLDESCERL bmy_21817T0/1-410 QELKPLMRAL DEGAGPCDPG EVALPYVAPA VRLLEGEELP GPLDESCERL BACU002559/1-579 QELKPLMRAL DEGAGPCDPG EVALPYVAPA VRLLEGEELP GPLDESCERL ENSTTRP00000005622/1-572 QELKPLMRAL DEGAGPCDPG EVALPHVAPA VRLLEGEELP GPLDESCERL 501 550 ENSP00000245908/1-576 LRTLHGARHM VRDAPKFRKV AAQRLRGFRP NPELREALTT GFVRRLLWGS ENSBTAP00000018405/1-523 LRTLHRARQT ARDAPRFREA VARRLRG--- ---------- ---------- bmy_21817T0/1-410 LRTLHRARLL ARDAPRFREA AARRLRGFRP HPELREALTT GFLRRLLWGS BACU002559/1-579 LRTLHRARLL ARDAPRFREA AARRLRGFRP HPELREALTT GFLRRLLWGS ENSTTRP00000005622/1-572 LRTLHRARLL ARDAPRFREA AARRLRGFRP HPELREALTT GFLRRLLWGS 551 600 ENSP00000245908/1-576 RGAGAPRAER FEKFQRVLGV LSQRLEPDR ENSBTAP00000018405/1-523 ---------- ---------- --------- bmy_21817T0/1-410 RGAGAPWATR LEKFQRVLSV LSQRLEPDH BACU002559/1-579 RGAGAPWATR LEKFQRVLSV LSQRLEPDH ENSTTRP00000005622/1-572 QGAGAPWATR LEKFQRVLTV LSQRLEPDH