KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:28 2014 Check: 00 .. Name: ENSBTAP00000018408/1-929 Len: 952 Check: 6784 Weight: 1.00 Name: ENSTTRP00000001309/1-926 Len: 952 Check: 5368 Weight: 1.00 Name: ENSP00000354061/1-929 Len: 952 Check: 5640 Weight: 1.00 Name: bmy_04774T0/1-912 Len: 952 Check: 980 Weight: 1.00 Name: BACU000937/1-929 Len: 952 Check: 2307 Weight: 1.00 // 1 50 ENSBTAP00000018408/1-929 MESMLNKLKS TVTKVTADVT SAVMGNPVTR EFDVGRHIAS GGNGLAWKIF ENSTTRP00000001309/1-926 MESMLNKLKS TVTKVTADVT SAVMGNPVTR EFDVGRHIAS GGSGLAWKIF ENSP00000354061/1-929 MESMLNKLKS TVTKVTADVT SAVMGNPVTR EFDVGRHIAS GGNGLAWKIF bmy_04774T0/1-912 MESMLNKLKS TVTKVTADVT SAVMGNPVTR EFDVGRHIAS GGSGLAWKIF BACU000937/1-929 MESMLNKLKS TVTKVTADVT SAVMGNPVTR EFDVGRHIAS GGSGLAWKIF 51 100 ENSBTAP00000018408/1-929 NGTKKSTKQE VAVFVFDKKL IDKYQKFEKD QIIDSLKRGV QQLTRLRHPR ENSTTRP00000001309/1-926 NGTKKSTKQE VAVFVFDKKL IDKYQKFEKD QIIDSLKRGV QQLTRLRHPR ENSP00000354061/1-929 NGTKKSTKQE VAVFVFDKKL IDKYQKFEKD QIIDSLKRGV QQLTRLRHPR bmy_04774T0/1-912 NGTKKSTKQE VAVFVFDKKL IDKYQKFEKD QIIDSLKRGV QQLTRLRHPR BACU000937/1-929 NGTKKSTKQE VAVFVFDKKL IDKYQKFEKD QIIDSLKRGV QQLTRLRHPR 101 150 ENSBTAP00000018408/1-929 LLTVQHPLEE SRDCLAFCTE PVFASLANVL GNWENLPSPV SPDIKDYKLY ENSTTRP00000001309/1-926 LLTVQHPLEE SRDCLAFCTE PVFASLANVL GNWENLPSPV SPDIKDYKLY ENSP00000354061/1-929 LLTVQHPLEE SRDCLAFCTE PVFASLANVL GNWENLPSPI SPDIKDYKLY bmy_04774T0/1-912 LLTVQHPLEE SRDCLAFCTE PVFASLANVL GNWENLPSPV SPDIKDYKLY BACU000937/1-929 LLTVQHPLEE SRDCLAFCTE PVFASLANVL GNWENLPSPV SADIKDYKLY 151 200 ENSBTAP00000018408/1-929 DVETKYGLLQ VSEGLSFLHS SVKMVHGNIT PENIILNKSG AWKIMGFDFC ENSTTRP00000001309/1-926 DVETKYGLLQ VSEGLSFLHS SVKMVHGNVT PENIILNKSG AWKIMGFDFC ENSP00000354061/1-929 DVETKYGLLQ VSEGLSFLHS SVKMVHGNIT PENIILNKSG AWKIMGFDFC bmy_04774T0/1-912 DVETKYGLLQ VSEGLSFLHS SVKMVHGNVT PENIILNKSG AWKIMGFDFC BACU000937/1-929 DVETKYGLLQ VSEGLSFLHS SVKMVHGNVT PENIILNKSG AWKIMGFDFC 201 250 ENSBTAP00000018408/1-929 VSSTNPSEQE PKFPCKEWDP NLPSLCLPNP EYLAPEYILS VTCETASDMY ENSTTRP00000001309/1-926 ISSTNPSEQE PKFPCKEWDP NLPSLCLPNP EYLAPEYILS VSCETASDMY ENSP00000354061/1-929 VSSTNPSEQE PKFPCKEWDP NLPSLCLPNP EYLAPEYILS VSCETASDMY bmy_04774T0/1-912 ISSTNPSEQE PKFPCKEWDP NLPSLCLPNP EYLAPEYILS VSCETASDMY BACU000937/1-929 ISSTNPSEQE PKFPCKEWDP NLPSLCLPNP EYLAPEYILS VSCETASDMY 251 300 ENSBTAP00000018408/1-929 SLGTVMYAVF NKGKPVFEVN KQDIYKSFSR QLDQLSRLGS SSLTNIPEEV ENSTTRP00000001309/1-926 SLGTVMYAVF NKGKAIFEVN KQDIYKSFSR QLDQLSRLGS SSLTNIPEEV ENSP00000354061/1-929 SLGTVMYAVF NKGKPIFEVN KQDIYKSFSR QLDQLSRLGS SSLTNIPEEV bmy_04774T0/1-912 SLGTVMYAVF NKGKAVFEVN KQDIYKSFSR QLDQLSRLGS SSLTNIPEEV BACU000937/1-929 SLGTVMYAVF NKGKAVFEVN KQDIYKSFSR QLDQLSRLGS SSLTNIPEEV 301 350 ENSBTAP00000018408/1-929 REHVKLLLNV TPTVRPDADQ MTKVKFFLSS ASVRLLFFSQ LFPRPNLLVT ENSTTRP00000001309/1-926 REHVKLLLNV TPTVRPDADQ MTKIPFFDDV GAVTLQYFD- LFERD-LQKS ENSP00000354061/1-929 REHVKLLLNV TPTVRPDADQ MTKIPFFDDV GAVTLQYFDT LFQRDNLQKS bmy_04774T0/1-912 REHVKLLLNV TPTVRPDADQ MTKIPFFDDV GAVTLQYFDT LFQRDNLQKS BACU000937/1-929 CEHVKLLLNV TPTVRPDADQ MTKIPFFDDV GAVTLQYFDT LFQRDNLQKS 351 400 ENSBTAP00000018408/1-929 QVLKGLPSVV VTLPKRVIVQ RILPCLTSEF VNPDMVPFVL PNVLLIAEEC ENSTTRP00000001309/1-926 Q-FKGLPKVL PKLPKRVIVQ RILPCLTSEF VNPDMVPFVL PNVLLIAEEC ENSP00000354061/1-929 QFFKGLPKVL PKLPKRVIVQ RILPCLTSEF VNPDMVPFVL PNVLLIAEEC bmy_04774T0/1-912 QFFKGLPKVL PKLPKRVIVQ RILPCLTSEF VNPDMVPFVL PNVLLIAEEC BACU000937/1-929 QFFKGLPKVL PKLPKRVIVQ RILPCLTSEF VNPDMVPFVL PNVLLIAEEC 401 450 ENSBTAP00000018408/1-929 TKEEYVKLIL PELGPVFKQQ EPIQ----IL LIFLQKMDLL LTKTPPDEIK ENSTTRP00000001309/1-926 TKEEYVKLIL PELGPVFKQQ EPIQ----IL LIFLQKMDLL LTKTPPDEIK ENSP00000354061/1-929 TKEEYVKLIL PELGPVFKQQ EPIQ----IL LIFLQKMDLL LTKTPPDEIK bmy_04774T0/1-912 TKEEYVKLIL PELGPVFKQQ EPIQASNMIL LIFLQKMDLL LTKTPPDEIK BACU000937/1-929 TKEEYVKLIL PELGPVFRQQ EPIQ----IL LIFLQKMDLL LTKTPPDEIK 451 500 ENSBTAP00000018408/1-929 NSVLPMVYRA LEAPSIQIQE LCLNIIPTFA NLIDYPSMKN ALIPRIKNAC ENSTTRP00000001309/1-926 NSVLPMVYRA LEAPSIQIQE LCLNIIPTFA NLIDYPSMKN ALIPRIKNAC ENSP00000354061/1-929 NSVLPMVYRA LEAPSIQIQE LCLNIIPTFA NLIDYPSMKN ALIPRIKNAC bmy_04774T0/1-912 NSVLPMVYRA LEAPSIQIQE LCLNIIPTFA NLIDYPSMKN ALIPRIKNAC BACU000937/1-929 NSVLPMVYRA LEAPSIQIQE LCLNIIPTFA NLIDYPSMKN ALIPRIKNAC 501 550 ENSBTAP00000018408/1-929 LQTSSLAVRV NSLVCLGKIL EYLDKWFVLD DILPFLQQIP SKEPAVLMGI ENSTTRP00000001309/1-926 LQTASLAVRV NSLVCLGKIL EYLDKWFVLD DILPFLQQIP SKEPAVLMGI ENSP00000354061/1-929 LQTSSLAVRV NSLVCLGKIL EYLDKWFVLD DILPFLQQIP SKEPAVLMGI bmy_04774T0/1-912 LQTSSLAVRV NSLVCLGKIL EYLDKWFVLD DILPFLQQIP SKEPAVLMGI BACU000937/1-929 LQTSSLAVRV NSLVCLGKIL EYLDKWFVLD DILPFLQQIP SKEPAVLMGI 551 600 ENSBTAP00000018408/1-929 LGIYKCTFTH KKLGITKEQL AGKVLPHLIP LSIENNLNLN ---------- ENSTTRP00000001309/1-926 LGIYKCTFTH KKLGITKEQL AGKVLPHLIP LSIENNLNLN ---------- ENSP00000354061/1-929 LGIYKCTFTH KKLGITKEQL AGKVLPHLIP LSIENNLNLN ---------- bmy_04774T0/1-912 LGIYKCTFAH KKLGITKEQL AGKVLPHLIP LSIENNLNLN QITFVANLKH BACU000937/1-929 LGIYKCTFAH KKLGITKEQL AGKVLPHLIP LSIENNLNLN ---------- 601 650 ENSBTAP00000018408/1-929 ---------Q FNSFISVIKE MLNRLESEHK TKLEQLHIMQ EQQKSLDIGN ENSTTRP00000001309/1-926 ---------Q FNSFISVIKE MLNRLESEHK TKLEQLHIMQ EQQKSLDIGN ENSP00000354061/1-929 ---------Q FNSFISVIKE MLNRLESEHK TKLEQLHIMQ EQQKSLDIGN bmy_04774T0/1-912 YNHINFLLHQ FNSFISVIKE MLNRLESEHK TKLEQLHIMQ EQQKSLDIGN BACU000937/1-929 ---------Q FNSFISVIKE MLNRLESEHK TKLEQLHIMQ EQQKSLDIGN 651 700 ENSBTAP00000018408/1-929 QMNASEETKV TNVGSQQIDK VFNNIGADLL TGGESENKED GLQNKQKRAS ENSTTRP00000001309/1-926 QMNASEETKV TNVGSQHIDK VFNNIGADLL TGGESENKED GLQNKHKRAS ENSP00000354061/1-929 QMNVSEEMKV TNIGNQQIDK VFNNIGADLL TGSESENKED GLQNKHKRAS bmy_04774T0/1-912 QMNASEETKV TNVGSQHIDK VFNNIGADLL TGGESENKED GLQNKHKR-- BACU000937/1-929 QMNASEETKV TNVGSQHIDK VFNNIGADLL TGGESENKED GLQNKHKRAS 701 750 ENSBTAP00000018408/1-929 LTLEEKQKLA KEQEQAQKLK SQQPLKPQVH TPIAPVKQTK DLTDTLMDNM ENSTTRP00000001309/1-926 LTLEEKQKLA KEQEQAQKLK SQQPLKPQVH TPVAPVKQTK DLTDTLMDNM ENSP00000354061/1-929 LTLEEKQKLA KEQEQAQKLK SQQPLKPQVH TPVATVKQTK DLTDTLMDNM bmy_04774T0/1-912 ---------- ---------- ---------- --------TK DLTDTLMDNM BACU000937/1-929 LTLEEKQKLA KEQEQAQKLK SQQPLKPQVH TPVAPVKQTK DLTDTLMDNM 751 800 ENSBTAP00000018408/1-929 SSLTSLSVST PKISASSSFT SVPSTGLGMM FSTPIDNTKR NLTNGLNANM ENSTTRP00000001309/1-926 SSLTSLSVST PKISSSSTFT SVPSTGLGMM FSTPIDNTKR NLTNGLNANM ENSP00000354061/1-929 SSLTSLSVST PKSSASSTFT SVPSMGIGMM FSTPTDNTKR NLTNGLNANM bmy_04774T0/1-912 SSLTSLSVST PKISASSTFT SVPSTGLGMM FSTPIDNTKR NLTNGLNANM BACU000937/1-929 SSLTSLSVST PKISASSTFT SVPSTGLGMM FSTSIDNTKR NLTNGLNANM 801 850 ENSBTAP00000018408/1-929 GFQTSGFNMP VNTNQNFFSS PSTPGVTKMA LGTPSTLPNF SAVSVPPAGG ENSTTRP00000001309/1-926 GFQTSGFNVP VNTNQNFFSS PSAPGVAKMT LGTPSTLPNF SAVSVPPAGT ENSP00000354061/1-929 GFQTSGFNMP VNTNQNFYSS PSTVGVTKMT LGTPPTLPNF NALSVPPAGA bmy_04774T0/1-912 GFQTSGFNMP VNTNQNFFSS PSAPGVAKMA LGTPSTLPNF SAVSVPPAGA BACU000937/1-929 GFQTSGFNMP VNTNQNFFSS PSAPAVAKMT LGTPSTLPNF SAVSVPPAGA 851 900 ENSBTAP00000018408/1-929 KQTQQRPTDM SALNNLFGPQ KPKVSMNQLS QQKPNQWLNQ FVPPQGSPGM ENSTTRP00000001309/1-926 KLTQQRPTDM SALNNLFGPQ KPKVSMNQLS QQKPNXXXXX XXXXXXXXXX ENSP00000354061/1-929 KQTQQRPTDM SALNNLFGPQ KPKVSMNQLS QQKPNQWLNQ FVPPQGSPTM bmy_04774T0/1-912 KPTQQRPTDM SALNNLFGPQ KPKVSMNQLS QQKPNQWLNQ FVPAQGSPGV BACU000937/1-929 KPTQQRPTDM SALNNLFGPQ KPKVSMNQLS QQKPNQWLNQ FVPAQGSPGV 901 950 ENSBTAP00000018408/1-929 GSSVMGTQVN VMGQSAFGMQ ANPFFNPQNF AQPPTTMTSS SSASNDLKDL ENSTTRP00000001309/1-926 XXXXXXXXXX XXXXXXFGVQ TNPFFNPQNF AQPPPTMTSS SSASSDLKDL ENSP00000354061/1-929 GSSVMGTQMN VIGQSAFGMQ GNPFFNPQNF AQPPTTMTNS SSASNDLKDL bmy_04774T0/1-912 GSSVMGAQMR MIGQSAFGVQ TNPFFNPQNF AQPPPTMTSS SSASSDLKDL BACU000937/1-929 GSSVMGAQMR MIGQSAFGVQ TNPFFNPQNF AQPPPTMTSS SSASSDLKDL 951 1000 ENSBTAP00000018408/1-929 FG ENSTTRP00000001309/1-926 FG ENSP00000354061/1-929 FG bmy_04774T0/1-912 FG BACU000937/1-929 FG