KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:04:34 2014 Check: 00 .. Name: ENSTTRP00000002161/1-1042 Len: 1043 Check: 4158 Weight: 1.00 Name: ENSP00000377771/1-1042 Len: 1043 Check: 9156 Weight: 1.00 Name: bmy_10227T0/1-1040 Len: 1043 Check: 8514 Weight: 1.00 Name: ENSBTAP00000018435/1-1041 Len: 1043 Check: 5880 Weight: 1.00 // 1 50 ENSTTRP00000002161/1-1042 TPMWAG-GVG SPRRGPAPEP TDDLFARKLR QPARPPLTPH TFEPRPARGP ENSP00000377771/1-1042 MPMWAG-GVG SPRRGMAPAS TDDLFARKLR QPARPPLTPH TFEPRPVRGP bmy_10227T0/1-1040 --MWAG-GVG SPRRGPAPAP TDDLFARKLR QPARPPLTPH TFEPRPARGP ENSBTAP00000018435/1-1041 --MWAGGGVG SPRRGPAPAP TDDLFARKLR QPARPPLTPH TFEPRPTRGP 51 100 ENSTTRP00000002161/1-1042 LLRSGSDAGE ARPPTPASPR ARAHSHEETG RPPAPPARFF SDPLALLGLP ENSP00000377771/1-1042 LLRSGSDAGE ARPPTPASPR ARAHSHEEAS RPAATSTRLF TDPLALLGLP bmy_10227T0/1-1040 LLRSGSDAGE ARPPTPASPR ARSHSHEETG RPAAPPARFF SDPLALLGLP ENSBTAP00000018435/1-1041 LVRSGSDAGE ARPPTPASPR ARAHSHEEAS RPAAPPARFF SDPLALLGLP 101 150 ENSTTRP00000002161/1-1042 VEEPEPEFPP VPEPRWFAHY DVQSLLFDWA PRPRGTGGHA EAGSGTPASS ENSP00000377771/1-1042 AEEPEPAFPP VLEPRWFAHY DVQSLLFDWA PRSQGMGSHS EASSGTLASA bmy_10227T0/1-1040 VEEPEPEFPP VPEPRWFAHY DVQSLLFDWA PRPRGTGGHA EAGSGTPASA ENSBTAP00000018435/1-1041 AEEPEPEFPP VPEPRCFAHY DVQSLLFDWS PRPRGPGAQA EASSGTPAAA 151 200 ENSTTRP00000002161/1-1042 QDQTARSDLL LEAPGFVSEL GGEGELGLGG LVSPPVPPSL PNAAVSVLEE ENSP00000377771/1-1042 EDQAASSDLL HGAPGFVCEL GGEGELGLGG PASPPVPPAL PNAAVSILEE bmy_10227T0/1-1040 QDQTAGSDLL LEAPGFVSEL GGEGELGLGG LVSPPVPPSL PNAAVSVLEE ENSBTAP00000018435/1-1041 QDQTASSDLL LEAPGFVSEL GGEGELGLGG PVSPPVPPSL PNAAVSVLEE 201 250 ENSTTRP00000002161/1-1042 PQNRTSAYSL EHADLGAGYY RKYFYGKEHQ NFFGLDEVLG PVAVSLRREE ENSP00000377771/1-1042 PQNRTSAYSL EHADLGAGYY RKYFYGKEHQ NFFGMDESLG PVAVSLRREE bmy_10227T0/1-1040 PQNRTSAYSL EHADLGAGYY RKYFYGKEHQ NFFGLDEVLG PVAVSLRREE ENSBTAP00000018435/1-1041 PQNRTSAYSL EHADLGAGYY RKYFYGKEHQ NFFGLDEALG PVAVSLRREE 251 300 ENSTTRP00000002161/1-1042 KESSGGGTLH SYRIIVRTTQ LRTLRGTISE DALPPGPPRG LSPRKLLEHV ENSP00000377771/1-1042 KEGSGGGTLH SYRVIVRTTQ LRTLRGTISE DALPPGPPRG LSPRKLLEHV bmy_10227T0/1-1040 KESSGGGTLH SYRIIVRTTQ LRTLRGTISE DALPPGPPRG LSPRKLLEHV ENSBTAP00000018435/1-1041 KDSSGGGTLH SYRIIVRTTQ LRTLRGTISE DALPPGPPRG LSPRKLLEHV 301 350 ENSTTRP00000002161/1-1042 ASRLSPTCLR LGSASPKVPR TLLTLDEQVL SFQRKVGILY CRAGQGSEEE ENSP00000377771/1-1042 APQLSPSCLR LGSASPKVPR TLLTLDEQVL SFQRKVGILY CRAGQGSEEE bmy_10227T0/1-1040 ASRLSPTCLR LGSASPKVPR TLLTLDEQVL SFQRKVGILY CRAGQGSEEE ENSBTAP00000018435/1-1041 APRLSPTCLR LGSASPKVPR TLLTLDEQVL SFQRKVGILY CRAGQGSEEE 351 400 ENSTTRP00000002161/1-1042 MYNNQDAGPS FMQFLTLLGD VVRLKGFESY RAQLDTKXXX XXXXXXXXXX ENSP00000377771/1-1042 MYNNQEAGPA FMQFLTLLGD VVRLKGFESY RAQLDTKTDS TGTHSLYTTY bmy_10227T0/1-1040 MYNNQDAGPS FMQFLTLLGD VVRLKGFESY RAQLDTKTDS TGTHSLYTTY ENSBTAP00000018435/1-1041 MYNNQEAGPA FMQFLTLLGD VVRLKGFESY RAQLDTKTDS TGTHSLYTTY 401 450 ENSTTRP00000002161/1-1042 XXXXXXXXXX XXXXXXXXXX XXLLRKRHIG NNISSIVFQE PGSKPFCPTT ENSP00000377771/1-1042 QDHEIMFHVS TMLPYTPNNQ QQLLRKRHIG NDIVTIVFQE PGSKPFCPTT bmy_10227T0/1-1040 QDHEIMFHVS TMLPYTPNNQ QQLLRKRHIG NNIVTIVFQE PGSKPFCPTT ENSBTAP00000018435/1-1041 QDHEIMFHVS TMLPYTPNNQ QQLLRKRHIG NDIVTIVFQE PGSKPFCPTT 451 500 ENSTTRP00000002161/1-1042 IRSHFQHVFL VVRAHAPCTP HTSYRVAVSR TQDTPAFGPA LPPGGGPFAA ENSP00000377771/1-1042 IRSHFQHVFL VVRAHTPCTP HTTYRVAVSR TQDTPAFGPA LPAGGGPFAA bmy_10227T0/1-1040 IRSHFQHVFL VVRAHAPCTP HTSYRVAVSR TQDTPAFGPA LPPGGGPFAA ENSBTAP00000018435/1-1041 IRSHFQHIFL VVRAEAPCTP HTSYRVAVSR TQDTPAFGPA LPPGGGPFAA 501 550 ENSTTRP00000002161/1-1042 NADFRALLLA KALNGEQAAG HARQFHAMAT RTRQQYLQDL ATNEVTTTSL ENSP00000377771/1-1042 NADFRAFLLA KALNGEQAAG HARQFHAMAT RTRQQYLQDL ATNEVTTTSL bmy_10227T0/1-1040 NADFRALLLA KALNGEQAAG HARQFHAMAT RTRQQYLQDL ATNEVTTTSL ENSBTAP00000018435/1-1041 NADFRALLLA KALNGEQAAG HARQFHAMAT RTRQQYLQDL ATNEVTTTSL 551 600 ENSTTRP00000002161/1-1042 DSASRFGLPS LGGRRRASPR GPGAELQAAG ALVWGVRAAP GARGATGAEE ENSP00000377771/1-1042 DSASRFGLPS LGGRRRAAPR GPGAELQAAG SLVWGVRAAP GARVAAGAQA bmy_10227T0/1-1040 DSASRFGLPS LGGRRRASPR GPGAELQAAG ALVWGVRAAP GARGATGAEA ENSBTAP00000018435/1-1041 DSASRFGLPS LGGRRRAAPR GPGAELQAAG ALVWGVRAAP GARGAAGAEA 601 650 ENSTTRP00000002161/1-1042 GGPDGAEVPC LLGISAEALV LVAPRDGRVV FNCACRDVLA WTFSEQQLDL ENSP00000377771/1-1042 SGPEGIEVPC LLGISAEALV LVAPRDGRVV FNCACRDVLA WTFSEQQLDL bmy_10227T0/1-1040 GGPDGAEVPC LLGISAEALV LVAPRDGRVV FNCACRDVLA WTFSEQQLDL ENSBTAP00000018435/1-1041 GSSDGAEVPC LLGISAEALV LVAPRDGRVV FNCSCRDVLA WTFSEQRLDL 651 700 ENSTTRP00000002161/1-1042 YHGRGEAIML RFDGPPGQAV GEVVTRLQLV SRGCQTRELA LPRDGQGRLG ENSP00000377771/1-1042 YHGRGEAITL RFDGSPGQAV GEVVARLQLV SRGCETRELA LPRDGQGRLG bmy_10227T0/1-1040 YHGRGEAIML RFDGPPGQAV GEVVTRLQLV SRGCETRELA LPRDGQGRLG ENSBTAP00000018435/1-1041 YYGRGEAITL RFDGPPGQAV GEVVARLQLV SRGCETRELA LPRDGQGRLG 701 750 ENSTTRP00000002161/1-1042 FKVDAEGFFT HVERFXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000377771/1-1042 FEVDAEGFVT HVERFTFAET AGLRPGARLL RVCGQTLPSL RPEAAAQLLR bmy_10227T0/1-1040 FEVDAEGFVT HVERFTFAET TGLRPGARLL RVCGQTLPSL GPEAAAQLLR ENSBTAP00000018435/1-1041 FEVDAAGFIT HVERFTFAET TGLRPGARLL RVCGQTVPSL GPEAAAQLLR 751 800 ENSTTRP00000002161/1-1042 XXXXXXXXXX XXXXXXXXXX SFSELYMLSL QEPSRRGAPE PVQDEAPAVA ENSP00000377771/1-1042 SAPKVCVTVL PPDESGRPRR SFSELYTLSL QEPSRRGAPD PVQDEVQGVT bmy_10227T0/1-1040 SAPKVCVTVL TPDESGRPRR SYSELYMLSL QEPSRRGAPE LVQDEAPAVA ENSBTAP00000018435/1-1041 SAPKVCVTVL PPDDSGRPRR SFSELYTLSL QEPSRRGAAE PVQDEAPAEA 801 850 ENSTTRP00000002161/1-1042 LLATTKQLLQ VCLNDGSGPP GPGDLAEERT EFLHSQNPPS PCSSLSDEAP ENSP00000377771/1-1042 LLPTTKQLLH LCLQDGGSPP GPGDLAEERT EFLHSQNSLS PRSSLSDEAP bmy_10227T0/1-1040 LLPTTKQLLQ VCLNDGGGPP GPGDLAEERT EFLHSQNPPS PCSSLSDEAP ENSBTAP00000018435/1-1041 LLPDTKQLLQ VCLNDSGGPP GPGDLVEERT EFLHSQNPPS PSSSLSDEAP 851 900 ENSTTRP00000002161/1-1042 VLPNTTPDLL LATTAKPAAP SAGRETPPTQ DGPGSPSGCE DRGDPAPELR ENSP00000377771/1-1042 VLPNTTPDLL LATTAKPSVP SADSETPLTQ DRPGSPSGSE DKGNPAPELR bmy_10227T0/1-1040 VLPNTTPDLL LATTAKPAAP SAGRETPPTQ DGPGSPSGCE DRGDPAPELR ENSBTAP00000018435/1-1041 VLPNTTPDLL LATTAKPAAP SEGRETPLTQ DGPGSPGGFE DKDEPAPELR 901 950 ENSTTRP00000002161/1-1042 ASFLPRTLSL RNSISKIMSE AGSETLEDEW QSISEIASTC NTILESLSRE ENSP00000377771/1-1042 ASFLPRTLSL RNSISRIMSE AGSGTLEDEW QAISEIASTC NTILESLSRE bmy_10227T0/1-1040 ASFLPRTLSL RNSISKIMSE AGSETLEDEW QSISEIASTC NTILESLSRE ENSBTAP00000018435/1-1041 ASFLPRTLSL RNSISKIMSE AGSETLEDEW QSISEIASTC NTILESLSRE 951 1000 ENSTTRP00000002161/1-1042 GPPIPESRDA KGTPKSDAEP EPVSLFEKVS HLKSMLSNLP DDLHKKKGDR ENSP00000377771/1-1042 GQPIPESGDP KGTPKSDAEP EPGNLSEKVS HLESMLRKLQ EDLQKEKADR bmy_10227T0/1-1040 GPPIPESRDA KGTPKSDAEP EPGSLSEKVS HLESMLRKLQ DDLQKEKADR ENSBTAP00000018435/1-1041 GQPILESGDA KGTPKSDAEP EPSSLSEKVS HLESMLRKLQ DDLQKEKADR 1001 1050 ENSTTRP00000002161/1-1042 AALEEEVRSL RHNNRRLQAE SESAATHLLL ASKQLGSPTS DLA ENSP00000377771/1-1042 AALEEEVRSL RHNNRRLQAE SESAATRLLL ASKQLGSPTA DLA bmy_10227T0/1-1040 AALEEEVRSL RHNNRRLQAE SESAATRLLL ASKQLGSPTS DLA ENSBTAP00000018435/1-1041 AALEEEVRSL RHNNRRLQAE SESAATRLLL ASKQLGSLAT DLA