KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:36 2014 Check: 00 .. Name: ENSP00000384273/1-551 Len: 606 Check: 3799 Weight: 1.00 Name: ENSBTAP00000018453/1-551 Len: 606 Check: 5875 Weight: 1.00 Name: ENSTTRP00000002164/1-574 Len: 606 Check: 6980 Weight: 1.00 Name: BACU003481/1-585 Len: 606 Check: 6699 Weight: 1.00 Name: bmy_10228T0/1-560 Len: 606 Check: 79 Weight: 1.00 // 1 50 ENSP00000384273/1-551 ---------- ---------- ---------- -----MDELF PLIFPAEPAQ ENSBTAP00000018453/1-551 ---------- ---------- ---------- -----MDDLF PLIFPAEPAQ ENSTTRP00000002164/1-574 ---------- SGEWLCCSAR RGPSCDPGPA PGTPAMDXXX XXXXPAEPAQ BACU003481/1-585 MLVGTLLTKV EFSYLWVFAL VSVVCQ---- --REYCYNLF PLIFPTEPAQ bmy_10228T0/1-560 ---------- ---------- ---------- -----MDDLF PLIFPAEPAQ 51 100 ENSP00000384273/1-551 ASGPYVEIIE QPKQRGMRFR YKCEGRSAGS IPGERSTDTT KTHPTIKING ENSBTAP00000018453/1-551 ASGPYVEIIE QPKQRGMRFR YKCEGRSAGS IPGERSTDTT KTHPTIKING ENSTTRP00000002164/1-574 ASGPYVEIIE QPKQRGMRFR YKCEGRSAGS IPGERSTDTT KTHPTIKING BACU003481/1-585 ASGPYVEIIE QPKQRGMRFR YKCEGRSAGS IPGERSTDTT KTHPTIKING bmy_10228T0/1-560 ASGPYVEIIE QPKQRGMRFR YKCEGRSAGS IPGERSTDTT KTHPTIKING 101 150 ENSP00000384273/1-551 YTGPGTVRIS LVTKDPPHRP HPHELVGKDC RDGFYEAELC PDRCIH---- ENSBTAP00000018453/1-551 YTGPGTVRIS LVTKDPPHRP HPHELVGKDC RDGFYEAELC PDRCIH---- ENSTTRP00000002164/1-574 YTGPGTVRIS LVTKDPPHRP HPHELVGKDC RDGFYEAELC PDRCIH---- BACU003481/1-585 YTGPGTVRIS LVTKDPPHRP HPHELVGKDC RDGFYEAELC PDRCIH---- bmy_10228T0/1-560 YTGPGTVRIS LVTKDPPHRP HPHELVGKDC RDGFYEAELC PDRCIHSGTD 151 200 ENSP00000384273/1-551 -----SFQNL GIQCVKKRDL EQAISQRIQT NNNPFQVPIE EQRGDYDLNA ENSBTAP00000018453/1-551 -----SFQNL GIQCVKKRDL EQAISQRIQT NNNPFQVPIE EQRGDYDLNA ENSTTRP00000002164/1-574 -----SFQNL GIQCVKKRDL EQAISQRIQT NNNPFQVPVE EQRGDYDLNA BACU003481/1-585 -----SFQNL GIQCVKKRDL EQAISQRIQT NNNPFQVPIE EQRGDYDLNA bmy_10228T0/1-560 ARGGLSFQNL GIQCVKKRDL EQAISQRIQT NNNPFQVPIE EQRGDYDLNA 201 250 ENSP00000384273/1-551 VRLCFQVTVR DPSGRPLRLP PVLSHPIFDN RAPNTAELKI CRVNRNSGSC ENSBTAP00000018453/1-551 VRLCFQVTVR DPAGRPLRLA PVLSHPIFDN RAPNTAELKI CRVNRNSGSC ENSTTRP00000002164/1-574 VRLCFQVTVR DPAGRPLRLS PALSHPIFDN RA--NTELKI CRVNRNSGSC BACU003481/1-585 VRLCFQVTVR DPAGRPLRLS PVLSHPIFDN RAPNTAELKI CRVNRNSGSC bmy_10228T0/1-560 VRLCFQVTVR DPAGRPLRLS PVLSHPIFDN RAPNTAELKI CRVNRNSGSC 251 300 ENSP00000384273/1-551 LGGDEIFLLC DKVQKEDIEV YFTGPGWEAR GSFSQADVHR QVAIVFRTPP ENSBTAP00000018453/1-551 LGGDEIFLLC DKVQKEDIEV YFTGPGWEAR GSFSQADVHR QVAIVFRTPP ENSTTRP00000002164/1-574 LGGDEIFLLC DKVQKEDIEV YFTGPGWEAR GSFSQADVHR QVAIVFRTPP BACU003481/1-585 LGGDEIFLLC DKVQKEDIEV YFTGPGWEAR GSFSQAYLHR QVAIVFRTPP bmy_10228T0/1-560 LGGDEIFLLC DKVQKEDIEV YFTGPGWEAR GSFSQADVHR QVAIVFRTPP 301 350 ENSP00000384273/1-551 YADPSLQAPV RVSMQLRRPS DRELSEPMEF QYLPDTDDRH RIEEKRKRTY ENSBTAP00000018453/1-551 YADPGLQAPV RVSMQLRRPS DRELSEPMEF QYLPDTDDRH RIEEKRKRTY ENSTTRP00000002164/1-574 YADPSLQAPV RVSMQLRRPS DRELSEPMEF QYLPDTDDRH RIEEKRKRTY BACU003481/1-585 YADPGLQAPV RVSMQLRRPS DRELSEPMEF QYLPDTDDRH RIEEKRKRTY bmy_10228T0/1-560 YADPSLQAPV RVSMQLRRPS DRELSEPMEF QYLPDTDDRH RIEEKRKRTY 351 400 ENSP00000384273/1-551 ETFKSIMKKS PFSGPTDPRP PPRRIAVPSR SSASVPKPAP QPYPFTSSLS ENSBTAP00000018453/1-551 ETFKSIMKKS PFNGPTDPRP PTRRIAVPNR GSASIPKPAP QPYSFTPSLS ENSTTRP00000002164/1-574 ETFKSIMKKS PFNGPTDHRP PTRRIAVPSR SSTSVPKPPP QPYPFTPSLS BACU003481/1-585 ETFKSIMKKS PFNGPTDHRP PTRRIAVPSR SSASVPKPAP QPYPFTPSLS bmy_10228T0/1-560 ETFKSIMKKS PFNGPTDHRP PTRRIAVPSR SSASVPKPAP QPYPFTPSLS 401 450 ENSP00000384273/1-551 TINYDEFPTM VFPSGQI-SQ ASALAPAPPQ VLPQ----AP APAPAPAMVS ENSBTAP00000018453/1-551 TINFEEFSPM VFPSGQIPSQ TSALAPAPTP VLTQTQVLAP APAPAPGMAS ENSTTRP00000002164/1-574 TINFEEFSPM VFPSGQIPSQ TSALAPAPAL VLAQ------ APAPAPAMAS BACU003481/1-585 TINFEEFSPM VFPSGQIPSQ TSALAPAPAP VLAQ------ APAPAPAMAS bmy_10228T0/1-560 TINFEEFSPM VFPSGQIPSH TSALAPAPAP VLAQ------ APAPAPAMAS 451 500 ENSP00000384273/1-551 ALAQAPAPVP VLAPGPPQAV APPAPKPTQA GEGTLSEALL QLQFD-DEDL ENSBTAP00000018453/1-551 TLAQA----- -LAPGLAQAV TPPAPRTNQT GEGTLTEALL QLQFDTDEDL ENSTTRP00000002164/1-574 ALAQAPAPGP VLAPGLAQAV TPPAPKTNPA GEGTLTEALL QLQFDADEDL BACU003481/1-585 ALAQAPAPGP VLAPGLAQAV TQPAPKTNPA GEGTLTEALL QLQFDADEDL bmy_10228T0/1-560 ALAQAPAPGP VLAPGLAQAV TPPAPKTNPA GEGTLTEALL QLQFDADEDL 501 550 ENSP00000384273/1-551 GALLGNSTDP AVFTDLASVD NSEFQQLLNQ GIPVAPHT-- ---TEPMLME ENSBTAP00000018453/1-551 GALLGNNTDP AVFTDLASVD NSEFQQLLNQ GVPMGPHT-- ---AEPMLME ENSTTRP00000002164/1-574 GALLGNSTDP AVFTDLASVD NSEFQQLLNQ GVPMAPHT-- ---AEPMLME BACU003481/1-585 GALLGNNTDP AVFTDLASVD NSEFQQLLSQ GVPMATXXXA EPGSEPMLME bmy_10228T0/1-560 GALLGNNTDP AVFTDLASVD NSEFQQLLNQ GVPMAPHT-- ---AEPMLME 551 600 ENSP00000384273/1-551 YPEAITRLVT GAQRPPDPAP APLGAPGLPN GLLSGDEDFS SIADMDFSAL ENSBTAP00000018453/1-551 YPEAITRLVT GSQRPPDPAP TPLGPPGLTN GLLSGDEDFS SIADVDFSAL ENSTTRP00000002164/1-574 YPEAITRLVT GSQRPPDPAP TPLGASGLTN GLLSGDEDFS SIADMDFSAL BACU003481/1-585 YPEAITRLVT GSQRPPDPAP TPLGASGLTN GLLSGDEDFS SIADMDFSAL bmy_10228T0/1-560 YPEAITRLVT GSQRPPDPAP TPLGASGLTN GLLSGDEDFS SIADMDFSAL 601 650 ENSP00000384273/1-551 LSQISS ENSBTAP00000018453/1-551 LSQISS ENSTTRP00000002164/1-574 LSQISS BACU003481/1-585 LSQISS bmy_10228T0/1-560 LSQISS