KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:37 2014 Check: 00 .. Name: BACU000507/1-610 Len: 613 Check: 1878 Weight: 1.00 Name: ENSTTRP00000006955/1-465 Len: 613 Check: 1670 Weight: 1.00 Name: ENSP00000430548/1-473 Len: 613 Check: 8331 Weight: 1.00 Name: bmy_17517T0/1-339 Len: 613 Check: 2922 Weight: 1.00 Name: ENSBTAP00000018461/1-473 Len: 613 Check: 8077 Weight: 1.00 // 1 50 BACU000507/1-610 MLNDPPRRLC TGATPALEGY ASVLLELLLN LAELQGKGLC LPKLVGIIPV ENSTTRP00000006955/1-465 ------MASC VGSRTLSKDD VNYR-HFWM- INEQQV-DIT IDFFYR-HTI ENSP00000430548/1-473 ------MASC VGSRTLSKDD VNYKMHFRM- INEQQVEDIT IDFFYRPHTI bmy_17517T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018461/1-473 ------MASC VGSRTLSKDD VNYKMHFRM- INEQQVEDIT IDFFYRPHTI 51 100 BACU000507/1-610 RLLDLIRPCG EWFLDRVSDS HHRKDQLVTG VSTAHVTAPV SALGHEQFEY ENSTTRP00000006955/1-465 TLLSF----- MYFAFTRDDS VPEDNIWRGI LSVIFFFLII SVLAFPNGPF ENSP00000430548/1-473 TLLSFTIVSL MYFAFTRDDS VPEDNIWRGI LSVIFFFLII SVLAFPNGPF bmy_17517T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018461/1-473 TLLSFTIVSL MYFAFTRDDS VPEDNIWRGI LSVIFFFLII SVLAFPNGPF 101 150 BACU000507/1-610 SVCCASDTGS LPDLRMFLFP SGLSVLYFLF LVFLLFLNFE QVKSLMYWLD ENSTTRP00000006955/1-465 ---------T RPHPALWRMV FXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000430548/1-473 ---------T RPHPALWRMV FGLSVLYFLF LVFLLFLNFE QVKSLMYWLD bmy_17517T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018461/1-473 ---------T RPHPALWRMV FGLSVLYFLF LVFLLFLNFE QVKSLMYWLD 151 200 BACU000507/1-610 PNLRYATREA DIMEYAVNCH VITWERIISH FDIFAFGHFW GWAMKALLIR ENSTTRP00000006955/1-465 XXXXXXXXXX XXXEYAVNCH VITWERIISH FDIFAFGHFW GWAMKALLIR ENSP00000430548/1-473 PNLRYATREA DVMEYAVNCH VITWERIISH FDIFAFGHFW GWAMKALLIR bmy_17517T0/1-339 ---------- ---------- ---------- ---------- ---MKALLIR ENSBTAP00000018461/1-473 PNLRYATREA DVMEYAVNCH VITWERIISH FDIFAFGHFW GWAMKALLIR 201 250 BACU000507/1-610 SYGLCWTISI TWELTELFFM HLLPNFAECW WDQVILDILL CNGGGIWLGM ENSTTRP00000006955/1-465 SYGLCWTISI TWELTELFFM HLLPNFAECW WDQVILDILL CNGGGIWLGM ENSP00000430548/1-473 SYGLCWTISI TWELTELFFM HLLPNFAECW WDQVILDILL CNGGGIWLGM bmy_17517T0/1-339 SYGLCWTISI TWELTELFFM HLLPNFAECW WDQVILDILL CNGGGIWLGM ENSBTAP00000018461/1-473 SYGLCWTISI TWELTELFFM HLLPNFAECW WDQVILDILL CNGGGIWLGM 251 300 BACU000507/1-610 VVCRFLEMRT YHWASFKDIH TTTGKIKRAV LQFTPASWTY VRWFDPKSSF ENSTTRP00000006955/1-465 VVCRFLEMRT YHWASFKDIH TTTGKIKRAV LQFTPASWTY VRWFDPKSSF ENSP00000430548/1-473 VVCRFLEMRT YHWASFKDIH TTTGKIKRAV LQFTPASWTY VRWFDPKSSF bmy_17517T0/1-339 VVCRFLEMRT YHWASFKDIH TTTGKIKRAV LQFTPASWTY VRWFDPKSSF ENSBTAP00000018461/1-473 VVCRFLEMRT YHWASFKDIH TTTGKIKRAV LQFTPASWTY VRWFDPKSSF 301 350 BACU000507/1-610 QRVAGIYLFM IIWQLTELNT FFLKHIFVFQ AGHPLSWCRI LFIGGITAPT ENSTTRP00000006955/1-465 QRVAGIYLFM IIWQLTELNT FFLKHIFVFQ ASHPLSWCRI LFIGGITAPT ENSP00000430548/1-473 QRVAGVYLFM IIWQLTELNT FFLKHIFVFQ ASHPLSWGRI LFIGGITAPT bmy_17517T0/1-339 QRVAGIYLFM IIWQLTELNT FFLKHIFVFQ ASHPLSWCRI LFIGGITAPT ENSBTAP00000018461/1-473 QRVAGIYLFM IIWQLTELNT FFLKHIFVFQ ASHPLSWCRI LFIGGITAPT 351 400 BACU000507/1-610 VRQYYAYLTD TQCKRVGTQC WVFGVIGFLE AIVCIKFGQD LFSKTQILYV ENSTTRP00000006955/1-465 VRQYYAYLTD TQCKRVGTQC WVFGVIGFLE AIVCIKFGQD LFSKTQILYV ENSP00000430548/1-473 VRQYYAYLTD TQCKRVGTQC WVFGVIGFLE AIVCIKFGQD LFSKTQILYV bmy_17517T0/1-339 VRQYYAYLTD TQCKRVGTQC WVFGVIGFLE AIVCIKFGQD LFSKTQILYV ENSBTAP00000018461/1-473 VRQYYAYLTD TQCKRVGTQC WVFGVIGFLE AIVCIKFGQD LFSKTQILYV 401 450 BACU000507/1-610 VLWLLCVAFT TFLCLYGMVW YAEHYGHREK TYSECEDGTY SPDISWPHGK ENSTTRP00000006955/1-465 VLWLLCVXXX XXXXXXXXXX XXXXXXXXXX TYSECEDGTY SPDISWPHGK ENSP00000430548/1-473 VLWLLCVAFT TFLCLYGMIW YAEHYGHREK TYSECEDGTY SPEISWHHRK bmy_17517T0/1-339 VLWLLCVAFT TFLCLYGMVW YAEHYGHREK TYSECEDGTY SPDISWPHGK ENSBTAP00000018461/1-473 VLWLLCVAFT TFLCLYGMVW YAEHYGHREK TYSECEDGTY SPDISWPHGK 451 500 BACU000507/1-610 GTK-GRRGAL KGPL--IPAF ENIVCQATPL PGTVFSGVSD GSLHWSAVNQ ENSTTRP00000006955/1-465 GTK------- ---------- ---------- ---------- ------GSED ENSP00000430548/1-473 GTK------- ---------- ---------- ---------- ------GSED bmy_17517T0/1-339 GTKDGAQGSV EERWGGRAGR AGIRGFRGPS PEPTAHGDGV SRFLWPGSED ENSBTAP00000018461/1-473 GSK------- ---------- ---------- ---------- ------GSED 501 550 BACU000507/1-610 GFLKWFGLAL HTPVMFAPVA KTDCFSEECR SVIQEQAAAL GLAMFSLLVQ ENSTTRP00000006955/1-465 GPPKHPG--- ---------- NSESHSSRRR NRHSKSKVTN GVGKK----- ENSP00000430548/1-473 SPPKHAG--- ---------- NNESHSSRRR NRHSKSKVTN GVGKK----- bmy_17517T0/1-339 GPPKHPG--- ---------- NSESHSSRRR NRHSKSKVTN GVGKK----- ENSBTAP00000018461/1-473 GPHKHPG--- ---------- NSESHSSRRR NRHSKSKVTN GVGKK----- 551 600 BACU000507/1-610 RCTYLLKESA KEHELLDPLN AIQSPCYTPS RNPILFPCNA PQCLFNTSAT ENSTTRP00000006955/1-465 ---------- ---------- ---------- ---------- ---------- ENSP00000430548/1-473 ---------- ---------- ---------- ---------- ---------- bmy_17517T0/1-339 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018461/1-473 ---------- ---------- ---------- ---------- ---------- 601 650 BACU000507/1-610 RLYTDDAESV FPV ENSTTRP00000006955/1-465 ---------- --- ENSP00000430548/1-473 ---------- --- bmy_17517T0/1-339 ---------- --- ENSBTAP00000018461/1-473 ---------- ---