KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:38 2014 Check: 00 .. Name: bmy_07161T0/1-666 Len: 1314 Check: 8376 Weight: 1.00 Name: ENSP00000413196/1-1040 Len: 1314 Check: 4331 Weight: 1.00 Name: ENSBTAP00000018468/1-1043 Len: 1314 Check: 1274 Weight: 1.00 Name: ENSTTRP00000010119/1-315 Len: 1314 Check: 3923 Weight: 1.00 Name: BACU019741/1-308 Len: 1314 Check: 9907 Weight: 1.00 // 1 50 bmy_07161T0/1-666 MLHGEDEHGL QKFYKTRSQI AESNPQGGFH CKNILEVFGI KSTELWPLME ENSP00000413196/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018468/1-1043 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_07161T0/1-666 SEALTGGLIG VSDFIEFWTL VLIVTFLFPL KERKNSELCT DHLHGTRKPT ENSP00000413196/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018468/1-1043 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_07161T0/1-666 RGISGGKEKE RFRRLMMSSV ATEGKLRQAV SLQGVDPETC MIVFTNHWAQ ENSP00000413196/1-1040 ---------- -----MMSSV STESKLQQAV SLQGVDPETC MIVFKNHWAQ ENSBTAP00000018468/1-1043 ---------- -----MMSSV ATESKIQRAV SLQGVDPETC MIVFKNHWAQ ENSTTRP00000010119/1-315 ---------- -----MMSSV ATEGKLRQAV SLQGVDPETC MIVFKNHWAQ BACU019741/1-308 ---------- -----MMSSV ATEGKLRQAV SLQGVDPETC MIVFKNHWAQ 151 200 bmy_07161T0/1-666 ELLLQTLSGG QGYPLTHLHF AVCQGQLVIQ PSIIRESQYV FHSHRPPHPC ENSP00000413196/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018468/1-1043 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_07161T0/1-666 QKCGAFKLGL RGWRACCVEV EPPFGQMRYC SPTLCDVKAR AKGKEHSPKV ENSP00000413196/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018468/1-1043 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_07161T0/1-666 EIKLPTFVTM INEQLQTSSF CSLTPSFNSH ERETQNAHMY LVGGHGSYIF ENSP00000413196/1-1040 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018468/1-1043 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_07161T0/1-666 HEDLVVKILE KHDPLKNTQA KYGVIPPDEA SAVQNYVEHM LFLLIEEQAR ENSP00000413196/1-1040 ----VVKILE KHDPLKNTQA KYGSIPPDEA SAVQNYVEHM LFLLIEEQAK ENSBTAP00000018468/1-1043 ----VVKILE KHDPLKNTQA KYGSIPPDEA SAVQNYVEHM LFLLIEEQAR ENSTTRP00000010119/1-315 ----VVKILE KHDPLKNTQA KYGFIPPDEA SAVQNYVEHM LFLLIEEQAR BACU019741/1-308 ----VVKILE KHDPLKNTQA KYGVIPPDEA SAVQNYVEHM LFLLIEEQAR 351 400 bmy_07161T0/1-666 DAAMGPILEF VVSENIMEKL FLWSLRREFT DETKMEQLKM YEMLITQSHQ ENSP00000413196/1-1040 DAAMGPILEF VVSENIMEKL FLWSLRREFT DETKIEQLKM YEMLVTQSHQ ENSBTAP00000018468/1-1043 DAAMGPILEF VVSENIMEKL FLWSLRREFT DETKMEQLKM YEMLITQSHQ ENSTTRP00000010119/1-315 DAAMGPILEF VVSENIMEKL FLWSLRREFT DETKMEQLKM YEMLITQSHQ BACU019741/1-308 DAAMGPILEF VVSENIMEKL FLWSLRREFT DETKMEQLKM YEMLITQSHQ 401 450 bmy_07161T0/1-666 PLLHHKPILK PLMMLLSSCS GTTTPTVEGK LVVLLNQLCS ILAKDPSILE ENSP00000413196/1-1040 PLLHHKPILK PLMMLLSSCS GTTTPTVEEK LVVLLNQLCS ILAKDPSILE ENSBTAP00000018468/1-1043 PLLHHKPILK PLMMLLSSCS GTTTPTVEGK LVVLLNQLCS ILAKDPSILE ENSTTRP00000010119/1-315 PLLHHKPILK PLMMLLSSCS GTTTPTVEGK LVVLLNQLCS ILAKDPSILE BACU019741/1-308 PLLHHKPILK PLMMLLSSCS GTTTPTVEGK LVVLLNQLCS ILAKDPSILE 451 500 bmy_07161T0/1-666 LFFHTSEDQG AANFLIFSLL IPFIHREGTV GQQARDALLF IMSLSAENSM ENSP00000413196/1-1040 LFFHTSEDQG AANFLIFSLL IPFIHREGSV GQQARDALLF IMSLSAENTM ENSBTAP00000018468/1-1043 LFFHTSEDQG AANFLIFSLL IPFIHREGTV GQQARDALLF IMSLSAENSV ENSTTRP00000010119/1-315 LFFHTSEDQG AANFLIFSLL IPFIHREGTV GQQARDALLF IMSLSAENSM BACU019741/1-308 LFFHTSEDQG AANFLIFSLL IPFIHREGTV GQQARDALLF IMSLSAENSI 501 550 bmy_07161T0/1-666 VAHHIVENTY FCP------- ---------- ---------- --DDWLLLPP ENSP00000413196/1-1040 VAHHIVENTY FCPVLATGLS GLYSSLPTKL EEKGEEWHCL LKDDWLLLPS ENSBTAP00000018468/1-1043 VAHHIVENTY FCPVLATGLS GLYSSLPTKL EEKGEGWHCL LRDDWLLLPP ENSTTRP00000010119/1-315 VAHHIVENTY FCPVLATGLS GLYSSLPAK- PE-GEG---- ---------- BACU019741/1-308 VAHHIVENTY FCPVLATGLS GLYSSLPTKL EE-GEE---- ---------- 551 600 bmy_07161T0/1-666 LVQFMNSLEF CNAVIQVAHP LIRNQLVNYI YNGFLVPVLA PALHKVS--- ENSP00000413196/1-1040 LVQFMNSLEF CNAVIQVAHP LIRNQLVNYI YNGFLVPVLA PALHKVTVEE ENSBTAP00000018468/1-1043 LVQFMNSLEF CNAVIQVAHP LIRNQLVNYI YNGFLVPVLA PALHKVTVEE ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 VMTTTAYLDL FLRSISEPAL LEIFLRFILL HQHENVHILD TLTSRINTPF ENSBTAP00000018468/1-1043 VMTTTAYLDL FLRSISEPAL LETFLRFILL HQHENVHILD TLTSRINTPF ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- DWLIK----- ENSP00000413196/1-1040 RLCVVSLALF RTLIGLHCED VMLQLVLRYL IPCNHMMLSQ RWAVKERDCY ENSBTAP00000018468/1-1043 RLCVVSLALF RTLIGLHCED VMLQLILRYL IPCNHMMLSQ RWAVKERDCY ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 SVSAAKLLAL TPVCCSSGIT LTLGNQERDY ILWSKCMHDT ---SGPVERP ENSBTAP00000018468/1-1043 SVSAAKLLAL TPVCCSSGIT LTLGNQERDY ILWSQCRRDS PGRAGPAEQL ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 751 800 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 FPEAFSESAC IVEYGKALDI SYLQYLWEAH TNILRCMRDC RVWSALYDGD ENSBTAP00000018468/1-1043 LPEASPPSAC IVEYGKALDI SYLQYLWEAH SNILRCMRDC RVWSALYDGD ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 SPDPEMFLQS LTEEGSVSSA CPVFGLPQQL PRKTGPQLAP RKDKSQTELE ENSBTAP00000018468/1-1043 SPNPEACCLG PPEERAPGAT SPVLRLPQQV PGTPMPPLAP GKEKSHTELE ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 WDDSYDTGIS SGADVGSPGP YDDLEVSGPP APIDPPKHIQ EMKKNALLLF ENSBTAP00000018468/1-1043 WDDSYDTGIS SGTGGGSPGP YEDAENASPP VPVDPPKHIQ EMKKNAILLF ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 901 950 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 KGSYIEESDF QDDVMVYRLC AEKDSEDMKD SQEEAARPPA EAQAEVQSVP ENSBTAP00000018468/1-1043 KGAYIEESDF QDDVMVYRLC AEKDAEDVHG SQEHSARPP- -AQTQVQGAP ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 951 1000 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 INNGPLLSTQ PETDSEEEWN RDNSDPFHSE PKEPKQEREP EAAPESNSEL ENSBTAP00000018468/1-1043 LNNGPLPGPE PETESEEENG RDDSAVLHGV SRDPARANEP EVTPEATPES ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 1001 1050 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 ASPAPEAEHS SNLTAAHPES EELIAQYDQI IKELDSGAEG LMEQNYPTPD ENSBTAP00000018468/1-1043 AAPSPKAEPS AQPTAAVPEG EDFMAQYDQI IKELGSSTEG LMEQDLALPD ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 1051 1100 bmy_07161T0/1-666 ---------- ---------- ---------- --DTYTVLSS ED------PC ENSP00000413196/1-1040 PLLLTKEEEG -KEESKGEKE KEGKKELEDE E-DDFDSFIA EMPAVETVPS ENSBTAP00000018468/1-1043 ALLVTKEPEG EKDESQGGEE EEGKKDPEEE DDDDFDSFIA EAPPAETPPS ENSTTRP00000010119/1-315 ---------- ---------- ---------- --DDFDSFIA EAPAAETPPS BACU019741/1-308 ---------- ---------- ---------- --DDFDPFVA EASAAETQPS 1101 1150 bmy_07161T0/1-666 QVIGIDSRGR ERSKEQRITC LLMKRPPLYI ---------- ---------- ENSP00000413196/1-1040 PFVGRDEAAF ASRHPVRTQS TPFTGPFISV VLSKLENMLE NSLHVNLLLI ENSBTAP00000018468/1-1043 PFGARDDAAF ASHRPARTQS TPFTGPFISV VLSKLENMLE NSLHVNLLLI ENSTTRP00000010119/1-315 PFGARDEAAC AGHRPARTQS TPFT------ ---------- ---------- BACU019741/1-308 PFGARDEAVF ARHRPARTQS TPFT------ ---------- ---------- 1151 1200 bmy_07161T0/1-666 ---------- ---------- ---------- ---------- ---------- ENSP00000413196/1-1040 GIITQLASYP QPLLRSFLLN TNMVFQPSVR SLYQVLASVK NKIEQFASVE ENSBTAP00000018468/1-1043 GIITQLASYP QPLLRSFLLN TNMVFQPSVR SLYQVLASVK NKIEQFASVE ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 1201 1250 bmy_07161T0/1-666 ---------- -----WTFHF LGLTFYRNQE HLIMATLKAG CGA---DGSS ENSP00000413196/1-1040 RDFPGLLIQA QQYLLFRVDM SDMTPAALTK DPIQEASRTG SGKNLLDGPP ENSBTAP00000018468/1-1043 RDFPGLLIQA QQYLLFRVDL SDPSTETPTK DPVQDTSRTG SGKNFLDGPP ENSTTRP00000010119/1-315 ---------- ---------- ------ENTE SSVS------ ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 1251 1300 bmy_07161T0/1-666 RLEQQVLVED VHLLPFSAF- ---------- ---------- ---------- ENSP00000413196/1-1040 RVLQPFLTHR TKVAEAPPNL PLPVRNPMLA AALFPEFLKE LAALAQEHSI ENSBTAP00000018468/1-1043 KVLQPFLTNR AKVVGAPPSL PPPVRDTMLA AALFPEFLKE LAALAQEHSI ENSTTRP00000010119/1-315 ---------- ---------- ---------- ---------- ---------- BACU019741/1-308 ---------- ---------- ---------- ---------- ---------- 1301 1350 bmy_07161T0/1-666 ---------- ---- ENSP00000413196/1-1040 LCYKILGDFE DSCC ENSBTAP00000018468/1-1043 LCCRILGDPD DACW ENSTTRP00000010119/1-315 ---------- ---- BACU019741/1-308 ---------- ----