KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:45 2014 Check: 00 .. Name: ENSTTRP00000006513/1-361 Len: 449 Check: 4077 Weight: 1.00 Name: ENSP00000344829/1-361 Len: 449 Check: 1272 Weight: 1.00 Name: ENSBTAP00000018493/1-361 Len: 449 Check: 4218 Weight: 1.00 Name: bmy_13515T0/1-449 Len: 449 Check: 292 Weight: 1.00 Name: BACU001627/1-301 Len: 449 Check: 5406 Weight: 1.00 // 1 50 ENSTTRP00000006513/1-361 ---------- ---------- ---------- ---------- ---------- ENSP00000344829/1-361 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018493/1-361 ---------- ---------- ---------- ---------- ---------- bmy_13515T0/1-449 QGSGRLCSHG FGSLCLSGQP RPRVAKVVGG GGELRLRPAQ RSGAATGRRW BACU001627/1-301 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006513/1-361 ---------- ---------- ---------- --------MA GGGDLRVMDT ENSP00000344829/1-361 ---------- ---------- ---------- --------MA GGRHRRVVGT ENSBTAP00000018493/1-361 ---------- ---------- ---------- --------MA GCRDPRVVDT bmy_13515T0/1-449 GGGRSRPKGG EGGRRRTRVP GLVTAGGSGN RRPESPGEMA GGGDLRVVDT BACU001627/1-301 ---------- ---------- ---------- -----MRVLI GTG-----SV 101 150 ENSTTRP00000006513/1-361 LRLLLLVAAL PLVSRGVSRG AADWTQEKNY HQPALLNVSS LRQVAEGTSI ENSP00000344829/1-361 LHLLLLVAAL PWASRGVSPS ASAWPEEKNY HQPAILNSSA LRQIAEGTSI ENSBTAP00000018493/1-361 LHLLLLVAVL PLAVSGVRRG AVDWTQEKNY HQPALLNVSS LRQVAEGTSI bmy_13515T0/1-449 LRLLLLVAAL PLVFRGVSRG AADWTQEKNY HQPALLNLSS LRQVAEGTRI BACU001627/1-301 IRLL------ ---------- ---WRSRENY HQPALLNLSS LRQVAEGTSI 151 200 ENSTTRP00000006513/1-361 SEMWQNDLRP LLIERYPGSP GSYAARQHIM QRIQRLQADW VLEVDTFLSQ ENSP00000344829/1-361 SEMWQNDLQP LLIERYPGSP GSYAARQHIM QRIQRLQADW VLEIDTFLSQ ENSBTAP00000018493/1-361 SEMWQNDLRP LLIERYPGSP GSFAARQHIM QRIQRLQADW VLEVDTFLSQ bmy_13515T0/1-449 SEMWQNDLRP LLIERYPGSP GSYAARQHIM QRIQRLQADW VLEVDTFLSQ BACU001627/1-301 SEMWQNDLRP LLIERYPGSP GSYAARQHIM QRIQRLQADW VLEVDTFLSQ 201 250 ENSTTRP00000006513/1-361 TPYGYRSFSN IISTLNPTAK RHLVLSCHYD SKYFPHWDNR VFVGATDSAV ENSP00000344829/1-361 TPYGYRSFSN IISTLNPTAK RHLVLACHYD SKYFSHWNNR VFVGATDSAV ENSBTAP00000018493/1-361 TPYGYRSFSN IISTLNPTAK RHLVLACHYD SKYFPHWDDR VFVGATDSAV bmy_13515T0/1-449 TPYGYRSFSN IISTLNPTAK RHLVLACHYD SKYFPHWDNR VFVGATDSAV BACU001627/1-301 TPYGYRSFSN IISTLNPTAK RHLVLACHYD SKYFPRWDNR VFVGATDSAV 251 300 ENSTTRP00000006513/1-361 PCAMILELAR AVDKQLHSLK XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000344829/1-361 PCAMMLELAR ALDKKLLSLK TVSDSKPDLS LQLIFFDGEE AFLHWSPQDS ENSBTAP00000018493/1-361 PCAMMLELAR ALDKQLFSLK NISDSRPDLS LQLIFFDGEE AFHLWSPQDS bmy_13515T0/1-449 PCAMILELAR AVDKQLLLLK NISDSKPDLS LQLIFFDGEE AFLHWSPQDS BACU001627/1-301 PCAMILELAR AVDKQLLSLK NISDSKPDLS LQLIFFDGEE AFLHWSPQDS 301 350 ENSTTRP00000006513/1-361 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD LLILLDLIGA PNPTFPNFFP ENSP00000344829/1-361 LYGSRHLAAK MASTPHPPGA RGTSQLHGMD LLVLLDLIGA PNPTFPNFFP ENSBTAP00000018493/1-361 LYGSRHLASK MASTPHPPGA RDTNQLHGMD LLVLLDLIGA PFPTFPNFFP bmy_13515T0/1-449 LYGSRHLASK MASTAHPPGA RDTNQLHGMD LLILLDLIGA PNPTFPNFFP BACU001627/1-301 LYGSRHLASK MASTAHPPGA RDTNQLHGMD LLILLDLIGA PNPTFPNFFP 351 400 ENSTTRP00000006513/1-361 NTARWFHRLQ AIEHELHELG LLKDHSWERQ YFQNYGYGGV IQDDHIPFLR ENSP00000344829/1-361 NSARWFERLQ AIEHELHELG LLKDHSLEGR YFQNYSYGGV IQDDHIPFLR ENSBTAP00000018493/1-361 NTARWFGRLE AIEHGLHELG LLKDHSSERW YFRNYGYGGV IQDDHIPFLR bmy_13515T0/1-449 NTARWFHRLQ AIEHELHELG LLKDHSWESQ YFQNYGYGGV IQDDHIPFLR BACU001627/1-301 NTARWFHRLQ AI-------- ---------- ---------- ---------- 401 450 ENSTTRP00000006513/1-361 KGVPVLHLIP SPFPEVWHTM DDNEENLDKT TIGNLNKILK VFVLEYLHL ENSP00000344829/1-361 RGVPVLHLIP SPFPEVWHTM DDNEENLDES TIDNLNKILQ VFVLEYLHL ENSBTAP00000018493/1-361 RGVPVLHLIS SPFPEVWHTM DDNEENLDRT TIDNLNKILQ VFVLEYLHL bmy_13515T0/1-449 KGVPVLHLIP SPFPEVWHTM DDNEENLDKT TIDNLNKILK VFVLEYLHL BACU001627/1-301 -GVPVLHLIP SPFPEVWHTM DDNEENLDRT TTDNLNKILK VFVLEYLHL