KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:49 2014 Check: 00 .. Name: ENSP00000349142/1-298 Len: 329 Check: 3815 Weight: 1.00 Name: ENSBTAP00000018505/1-298 Len: 329 Check: 5814 Weight: 1.00 Name: BACU018972/1-288 Len: 329 Check: 5401 Weight: 1.00 Name: bmy_00659T0/1-320 Len: 329 Check: 5832 Weight: 1.00 Name: ENSTTRP00000004759/1-298 Len: 329 Check: 4706 Weight: 1.00 // 1 50 ENSP00000349142/1-298 MFSRAGVAGL SAWTLQPQWI QVRNMATLKD ITRRLKSIKN IQKITKSMKM ENSBTAP00000018505/1-298 MFSRAGVAGL SAWTVQPQWI QVRNMATLKD ITRRLKSIKN IQKITKSMKM BACU018972/1-288 MF-------F TTFILR---I QVRNMATLKD ITRRLKSIKN IQKITKSMKM bmy_00659T0/1-320 MFSPAGLAGL SAWAVQPQWI QVRNMATLKD ITRRLKSIKN IQKITKSMKM ENSTTRP00000004759/1-298 MFSPVGLAGL SAWAVQPQWI QVRNMATLKD ITRRLKSIKN IQKITKSMKM 51 100 ENSP00000349142/1-298 VAAAKYARAE RELKPARIYG LGSLALYEKA DIKGPEDKKK HLLIGVSSDR ENSBTAP00000018505/1-298 VAAAKYARAE RELKPARVYG VGSLALYEKA DIKTPEDKKK HLIIGVSSDR BACU018972/1-288 VAAAKYSRAE RELKPARVYG IGSLALYEKA DIKVPEDKKK HLLIGVSSDR bmy_00659T0/1-320 VAAAKYSRAE RELKPARVYG IGSLALYEKA DIKVPEDKKK HLLIGVSSDR ENSTTRP00000004759/1-298 VAAAKYARAE RELKPARVYG IGSLALYEKA DIKVPEDKKK HLLIGVSSDR 101 150 ENSP00000349142/1-298 GLCGAIHSSI AKQMKSEVAT LTAAGKEVML VGIGDKIRGI LYRTHSDQFL ENSBTAP00000018505/1-298 GLCGAIHSSV AKQMKSEAAN LAAAGKEVKI IGVGDKIRSI LHRTHSDQFL BACU018972/1-288 GLCGAIHSSI AKHLKSEVAN LTAAGKEVKI VGVGDKLRSI LHRTHSNQFL bmy_00659T0/1-320 GLCGAIHSSI AKHLKREVAN LTAAGKEVKI VGVGDKLRSI LHRTHSNQFL ENSTTRP00000004759/1-298 GLCGAIHSSI AKHLKSEVAN LTAAGKEVKI VGVGDKLRSI LHRTHSNQFL 151 200 ENSP00000349142/1-298 VAFKEVGRKP PTFGDASVIA LELLNSGYEF DEGSIIFNKF R-SVISYKTE ENSBTAP00000018505/1-298 VTFKEVGRRP PTFGDASVIA LELLNSGYEF DEGSIIFNRF R-SVISYKTE BACU018972/1-288 VTFKEVGRRP PTFGDASVIA LELLNSGYEF DEGSIIFNRF RQSVISYMTE bmy_00659T0/1-320 VTFKEVGRRP PTFGDASVIA LELLNSGYEF DEG------- --SVISYVTE ENSTTRP00000004759/1-298 VTFKEVGRRP PTFGDASVIA LELLNSGYEF DEGSIVFNRF R-SVISYKTE 201 250 ENSP00000349142/1-298 EKPIFSLNTV ASADSMSIYD DIDADVLQNY QEYNLANIIY YSLKESTTSE ENSBTAP00000018505/1-298 EKPIFSLDTI SSAESMSIYD DIDADVLRNY QEYSLANIIY YSLKESTTSE BACU018972/1-288 EKPIFSLDTI ANAESMSIYD DIDADVLQNY QEYNLANIIY YSLKESTTSE bmy_00659T0/1-320 EKPVFSLGTI ASAESMSIYD DIDADVLQNY QEYNLANIIY YSLKESTTSE ENSTTRP00000004759/1-298 EKPIFSLGTI ASAESMSIYD DIDADVLQNY QEYSLANIIY YSLKESTTSE 251 300 ENSP00000349142/1-298 QSARMTAMDN ASKNASEMID KLTLTFNRTR QAVITKELIE IISGAAALD- ENSBTAP00000018505/1-298 QSARMTAMDN ASKNASEMID KLTLTFNRTR QAVITKELIE IISGAAALD- BACU018972/1-288 QSARMTAMDN ASKNASEMID KLTLTFNRTR QAVITKELIE IISGAAAL-- bmy_00659T0/1-320 QSARMTAMDN ASKNASEMID KLTLTFNRTR QAVITKELIE IISGAAALEY ENSTTRP00000004759/1-298 QSARMTAMDN ASKNASEMID KLTLTFNRTR QAVITKELIE IISGAAALD- 301 350 ENSP00000349142/1-298 ---------- ---------- --------- ENSBTAP00000018505/1-298 ---------- ---------- --------- BACU018972/1-288 ---------- ---------- --------- bmy_00659T0/1-320 FGKYLCDILK ELMKIEFHPQ TRGKEDSAS ENSTTRP00000004759/1-298 ---------- ---------- ---------