KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:49 2014 Check: 00 .. Name: ENSP00000422354/1-633 Len: 634 Check: 6993 Weight: 1.00 Name: ENSBTAP00000018510/1-632 Len: 634 Check: 4428 Weight: 1.00 Name: ENSTTRP00000006919/1-628 Len: 634 Check: 3399 Weight: 1.00 Name: bmy_09306T0/1-354 Len: 634 Check: 5143 Weight: 1.00 Name: BACU014383/1-424 Len: 634 Check: 6240 Weight: 1.00 // 1 50 ENSP00000422354/1-633 MKAIKKSLTE EEYLYLDFSH QTEGCIFPLH TSVTLFLLSY CDCKIFKICL ENSBTAP00000018510/1-632 MKGIKKSLT- EEYLYLDFSH QKEGCIFPLH TSVTLFLLSY CDCTVFKVFL ENSTTRP00000006919/1-628 MKGIKKSLT- EEYLYLDFSH QKEGCIFPLH TSITLFLLSY CDCKIFKVCL bmy_09306T0/1-354 MKGIKKSLT- EEYLYLDLSH QKEGCIFPLH TSITLFLLSY CDCKIFKVCL BACU014383/1-424 MKGIKKSLT- EEYLYLDLSH QKEGCIFPLH TSITLFLLSY CDCKIFKVCL 51 100 ENSP00000422354/1-633 VVTKEVSRDS SLLRDDLIQD VEIQIISRQE LPPIVQNCCL PAVVERSDNF ENSBTAP00000018510/1-632 VLPGE-STGI SLLKNVPSEG VEIQTISRQE LPPIVQSCCL PAVVERPDNF ENSTTRP00000006919/1-628 VLTGE-STGI SLLKSVLSED VEIQIISRQE LPPIVQSCCL PAVVERPDNF bmy_09306T0/1-354 VLTGE-STGI SLLKNVLSED VEIQIISRQE LPPIVQNCCL PAVVERPDNF BACU014383/1-424 VLTEE-STGI SLLKNVLSED VEIQIISRQE LPPIVQNCCL PAVVERPDNF 101 150 ENSP00000422354/1-633 CRAGLAVVLR HIIQKSYEAD PLKKELLELL GFKKTCLKAC AEVSQWTRLC ENSBTAP00000018510/1-632 CRAGLAVVLR HIIQKSYEAD PSKKEILELL GFKKTCLKAC AEVSQWTRLC ENSTTRP00000006919/1-628 CRAGLAVVLR HIIQKSYEAD PSKKEILELL GFKKTCLKAC AEVSQWTRLC bmy_09306T0/1-354 CRAGLAVVLR HIIQKSYEAD PSKKEILELL GFKKTCLKAC AEVSQWTRLC BACU014383/1-424 CRAGLAVVLR HIIQKSYEAD PSKKEILELL GFKKTCLKAC AEVSQWTRLC 151 200 ENSP00000422354/1-633 ELTIPLAIEN FLRESSDQPP TIPVEILQLE KKLSEPVRVH NDDKLRRQKL ENSBTAP00000018510/1-632 ELTVPLAVEN FLKESFDQPP TIPAAILELE KKLSEPVRVH NDDKLRRQKL ENSTTRP00000006919/1-628 ELTIPLAIEN FLKESSDQPP AIPAEILELE KKLSEPVRVH NDDKLRRQKL bmy_09306T0/1-354 ELTIPLAIEN FLKESSDQPP TIPAEILELE RKLSEPVRVH NDDKLRRQKL BACU014383/1-424 ELTIPLAIEN FLKESSDQPP TIPAEILELE KKLSEPVRVH NDDKLRRQKL 201 250 ENSP00000422354/1-633 KQQKADGVGP PLTKGKAKSK VHTQETSEGL DSSSKSLELK VAFSKLTVQE ENSBTAP00000018510/1-632 KQQKAAGVGP SLAKEKTKSK GHRQETSEEG DSSSASLELK VAFSKLTIHK ENSTTRP00000006919/1-628 KQQ-AAGVRP SLS-EETKSK VHRQETSEEV DSSSASLELR A-FSKLTVHX bmy_09306T0/1-354 KQQKADGVRP SXDKEETKSK VHRQETSEEV DSSSASLELR VAFSKLT--- BACU014383/1-424 KQQKAAGVRP SLDKEETKSK VPRQETSEEV DCSSASLELR VAFSKLTVRE 251 300 ENSP00000422354/1-633 EPATTNREPS HIRKAKASDL PPLEHVFAEG LYFTLADIVL LPCIHHFLVI ENSBTAP00000018510/1-632 EPASANREPS YVRKAKASDL PPLDHVFAEG LYFTLADIVL LPCIHHFLVI ENSTTRP00000006919/1-628 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVI bmy_09306T0/1-354 ---------- ---------- ---------- ---------- --------VI BACU014383/1-424 EPAPANKEPA HVRKARASDL PPLDHVFVEG LYFTLADIVL LPCIHHFLVI 301 350 ENSP00000422354/1-633 ISRKFSEKLV EFPLLASWYQ RIQEVPGVKT AASKCGIQFL HLPKLLTTST ENSBTAP00000018510/1-632 ICRKLSGKLV EFPLVAAWYQ RIQEVPRVQT AASQCGIQFI SLPELQTTSS ENSTTRP00000006919/1-628 ICKKLSEKLV EFPLLAAWYQ RIQEVPRVKT TASQCGIQFL NLPELQTTSN bmy_09306T0/1-354 ICKKLSEKLV EFPLLAAWYQ RIQEVPRVKT TASQCGIQFL HLPELQTTSN BACU014383/1-424 ICKKLSEKLV EFPLLAAWYQ RIQEVPRVKT IASQCGIQFL HLPELQTTSN 351 400 ENSP00000422354/1-633 EQHPNLCEVP GVEEQSDPLF IGGPRPTMAK LMEKGIEVMF SPHPCPTWTL ENSBTAP00000018510/1-632 QQPPNLDEAP SAEEQNDPSF IGGPRPTMTK LMEKGIEVMF SPHPCPTWTL ENSTTRP00000006919/1-628 EQQPSLDEVP CVEEQNDPSF IGGPRPTMTK LMEKGIEVMF SPHPCPTWTL bmy_09306T0/1-354 EQQPSLDEVP CVEEQNDPSF IGGPRPTMTK LMLSAVEYKI ALN---SLTT BACU014383/1-424 EQQPSLDEVP CVEEQNDPSF IGGPRPTMTK LMEKGIEVMF SPHPCPTWTL 401 450 ENSP00000422354/1-633 DWNVLPAAVS PKEGKMSSDR ALRKQQQLNN LVYVVTNQAK PGDRIVDFCS ENSBTAP00000018510/1-632 DWDTLPAAVS PKEGKMSSDR ALRKQQQLNN LVYMVTNQAK PGDRIVDFCS ENSTTRP00000006919/1-628 DWDALPAAVS PKEGKMSSDR ALRKQQQLNN LVYVVTNQAK PGDRIVDFCS bmy_09306T0/1-354 DNTTLKISCT ---------- ---------- ---------- ---------- BACU014383/1-424 DWDTLPAAVS PKEGK----- ---------- ---------- ---------- 451 500 ENSP00000422354/1-633 GGGHVGIVLA HMLPSCQVTL IENKELSLIR AKKRSDELGL SNIWFIQANM ENSBTAP00000018510/1-632 GGGHVGIVLA HVLPSCQVIL IENKELSLIR AKKRSDELGL SNIWFIQANM ENSTTRP00000006919/1-628 GGGHVGIVLA HMLPSCQVTL IENKELSLIR AKKRSDELGL SNIWFIQANM bmy_09306T0/1-354 ---------- ---------- ---------- ---------- ---------- BACU014383/1-424 ---------- ---------- ---------- ---------- ---FWVFLIF 501 550 ENSP00000422354/1-633 EYFTGMFNIG VALHACGVAT DMVIEHCIKT RASFVTCPCC YGFIQNTSKF ENSBTAP00000018510/1-632 EYFTGMFNIG VALHACGVAT DMVIEHCLKT RASFVTCPCC YGFIQNTSKV ENSTTRP00000006919/1-628 EYFTGTFNIG VALHACGVAT DMVIEQCIKT RASFVTCPCC YGFIQNTSKF bmy_09306T0/1-354 ---------- ---------- ---------- ---------- ---------- BACU014383/1-424 KFYS------ ---------- ---------- ---------- ---------- 551 600 ENSP00000422354/1-633 NFPKSEQFKK TLSY-KEHMI LCRFADQTAV QLPPQRRLIG KQCMCLVDLD ENSBTAP00000018510/1-632 NFPKSSLFLP TFPHLQNHLI LCRPMDCPPS HLPPQPRISG KQCMCLVDLD ENSTTRP00000006919/1-628 NFPKSEQFKK TLSY-KEHMI LCRFADQTAV QLPPQRRLIG KQCMFLVDLD bmy_09306T0/1-354 ---------- ---------- ---------- ---------- ---------- BACU014383/1-424 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000422354/1-633 RARAAEECGY SVQVISMEPE SCSPKNNMIV GVPI ENSBTAP00000018510/1-632 RARAAEEHGF SVQVISMEPE SCSPKNNMIV GVPI ENSTTRP00000006919/1-628 RARAAEERGY SIQVMSMEPE SCSPKNNMIV GVPI bmy_09306T0/1-354 ---------- ---------- ---------- ---- BACU014383/1-424 ---------- ---------- ---------- ----