KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:50 2014 Check: 00 .. Name: ENSBTAP00000018512/1-452 Len: 588 Check: 4008 Weight: 1.00 Name: ENSP00000319006/1-467 Len: 588 Check: 2182 Weight: 1.00 Name: ENSTTRP00000016450/1-460 Len: 588 Check: 9740 Weight: 1.00 Name: bmy_06000T0/1-581 Len: 588 Check: 7759 Weight: 1.00 Name: BACU020571/1-472 Len: 588 Check: 1259 Weight: 1.00 // 1 50 ENSBTAP00000018512/1-452 ---------- ---------- ---------- ---------- ---------- ENSP00000319006/1-467 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016450/1-460 ---------- ---------- ---------- ---------- ---------- bmy_06000T0/1-581 ASAPHTPAQA RKGLERSPLP PPPGSLLWFP LVPPPDFGGN GVSGGQGSLG BACU020571/1-472 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000018512/1-452 ---------- ---------- ---------- ---------- ---------- ENSP00000319006/1-467 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016450/1-460 ---------- ---------- ---------- ---------- ---------- bmy_06000T0/1-581 RARSRKRKRG ALPVRSRRPC WSSGGGAEAR LGSPRRRRCQ ALVCGYPGRS BACU020571/1-472 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000018512/1-452 -----MSVVV QHVEEKAVHS WSRISTAGKK ALEEALLVFN PMSQDLSATE ENSP00000319006/1-467 -----MSVVV QHVEEKAVHS WSRISTAGKK ALEEALLVFN PMSQDLSATE ENSTTRP00000016450/1-460 -----MSVVV QHVEEKAVHS WSRISTAEKK ALEEALLVFN PMSQDLSATE bmy_06000T0/1-581 AVPNAMSVVV QHVEEKAVHS WSRISTAGKK ALEEALLVFN PMSQDLSATE BACU020571/1-472 -----MSVVV QHVEEKAVHS WSRISTAGKK ALEEALLVFN PMSQDLSATE 151 200 ENSBTAP00000018512/1-452 AQLVAFLQGL RDDGFQPTIL RSGDVYGYSS CTANPPSQTK LQARAPTPAA ENSP00000319006/1-467 AQLVAFLQGL RDDGFQPTIL RSGDVYGYSS CTANPPSQTK LQARAPNPTA ENSTTRP00000016450/1-460 AQLVAFLQGL RDDGFQPTIL RSGDVYGYSS CTANPPSQTK LQARAPTPAA bmy_06000T0/1-581 AQLVAFLQGL RDDGFQPTIL RSGDVYGYSS CTANPPSQTK LQARAPTPAA BACU020571/1-472 AQLVAFLQGL RDDGFQPTIL RSGDVYGYSS CTANPPSQTK LQARAPTPAA 201 250 ENSBTAP00000018512/1-452 TSPPASAPQT AVRLPAGRAT LLPMPLSGRL AKASTPGLAK HATTNLLLSS ENSP00000319006/1-467 TSPPASAPRT AMRLPAGRAT LLPMPLSGRL AKASTPALAK HATTNLLLSS ENSTTRP00000016450/1-460 TSPPASAPRT AMRLPAGRAT LLPMPLSGRL AKASTPALAK HATTNLLLSS bmy_06000T0/1-581 TSPPASAPRT AMRLPAGRAT LLPMPLSGRL AKASTPALAK HATTNLLLSS BACU020571/1-472 TSPPASAPRT AMRLPAGRAT LLPMPLSGRL AKASTPALAK HATTNLLLSS 251 300 ENSBTAP00000018512/1-452 LKQSSAGRAQ GAAVGFPTHL YPGVYPAMRL SVVLEALVPI KTPVACLGAK ENSP00000319006/1-467 LKQSSASHAR GAAVGFPTHL YPGVYPAMRL SVVLEALVPL KTPMPCLGAK ENSTTRP00000016450/1-460 LKQSSASRAR GAAVGFPTHL YPGVYPAMRL SVVLEALVPL KTPMPCLGAK bmy_06000T0/1-581 LKQSSASRAR GAAVGFPTHL YPGVYPAMRL SVVLEALVPL KTPMPCLGAK BACU020571/1-472 LKQSSASRAR GAAVGFPTHL YPGVYPAMRL SVVLEALVPL KTPMPCLGAK 301 350 ENSBTAP00000018512/1-452 PKAQSLQLSL GDSPLKVRKG PGKRLGNAQL KAPRKATSKG SKCLAQRGPR ENSP00000319006/1-467 HKAQSLQLSL ADSPLKLRKS SGKGPGNPRP KAPRKTTSKG PKCLTRKGPG ENSTTRP00000016450/1-460 HKAQSLQLSL ADSPLKLRKG PGKRLGNSQP KAPRKATSKG SKCLTRRGPR bmy_06000T0/1-581 HKAQSLQLSL ADSPLKLRKG PGKRLGNSQP KAPRKATSKD PKCLTRRGPR BACU020571/1-472 HKAQSLQLSL ADSPLKLRKG PGKRLGNSQP KAPRKATSKD PKCLTRRGPR 351 400 ENSBTAP00000018512/1-452 SGPRQGAGLQ SKTCKVTGSL GGPRVKDGGA LGTKAAQ--- ----AKAACA ENSP00000319006/1-467 AGPRRGSGHQ SKTNRATGSP SVRRMKGGSA LGTKTAQAKV ARTLAKAARA ENSTTRP00000016450/1-460 AGPRQGTGPQ SKIYKASGSL SGPRMKGGCA LGTKTAQ--- ----AKASRA bmy_06000T0/1-581 AGPRQGTGPQ SKTYKASGSL SGPQMKGGCA LGTKTAQ--- ----AKVARA BACU020571/1-472 AGPRRGTGPQ SKTYKASGSL SGPQMKGGCA LGTKTTQ--- ----AKVARA 401 450 ENSBTAP00000018512/1-452 QAKVAQTQAT ATQARAKAKA VRARAKAKA- ---------- ----ARIKAR ENSP00000319006/1-467 QAKVARTQAK AAKARAKAKA AQVKAKAKAK AAQ------- --VKAKAKVM ENSTTRP00000016450/1-460 QAKVARTQAK AAKSRAEAKA ARIKVKAKAK AVR------- --VKARAKAR bmy_06000T0/1-581 QAKVARTQAK AAKARAKAKA ARIKAKAKAK AVRAKAKAKA VRARARAKAK BACU020571/1-472 QAKVARTQAK AAKARAKAKA ARIKAKAKAV RAKAKAKA-- --VRARAKAK 451 500 ENSBTAP00000018512/1-452 EVRARAK--- ------AKAV QAKAKVARTQ PRGRGRPKGS IQGRTARRSR ENSP00000319006/1-467 AAWAKAKAK- ------AKAV RAKAKVARTQ PRGRGRPKGS AKARTTRKGQ ENSTTRP00000016450/1-460 AVRARAKAK- ------AKAV RARAKVARTQ PRGRGRPKRS VQARTARRGR bmy_06000T0/1-581 AVRARARAKA VRARARAKAV RAKAKVARTQ PRGRGRPKRS VQARTARRGR BACU020571/1-472 AVRARARAKA VRARARAKAV RAKAKVARTQ PRGRGRPKRS VQARTARRGR 501 550 ENSBTAP00000018512/1-452 KSRPETVGQK RKRTEEAKDL SPRKRTRLGP RSPKVQLGPG TARLLKFRAI ENSP00000319006/1-467 KNRPETVGQK RKRAEEAKDL PPKKRTRLGP RSPKAWLGPG TAKLLKFRAI ENSTTRP00000016450/1-460 KSCPEPVGQK RKRTEETKDL PPQKRTRLGP QSPKVWLGPG TAKLLQFRAI bmy_06000T0/1-581 KSCPETVGQK RKRTEEAKDL PPQKRTRLGP QSPKVWLGPG TAKLLKFRAI BACU020571/1-472 KSCPETVGQK RKRTEEAKDL PPQKRTRLGP QSPKVWLGSG TAKLLKFRAI 551 600 ENSBTAP00000018512/1-452 KVDRLASDDE VRQQAQRILR VNLSPVIRLQ PLPPHSAP ENSP00000319006/1-467 KVDRRSSDDE VRQRAQRILR VNLSPVIRLQ PLLPYSAV ENSTTRP00000016450/1-460 KVDRQSSDDE VRQQAQRILR VNLSPVIRLQ PLLPYSAP bmy_06000T0/1-581 KVDRQSSDHE VRQQAQRILR VNLSPVIRLQ PLLPYSAP BACU020571/1-472 KVDRQSSDHE VRQQAQRILR VNLSPVIRLQ PLLPYSAP