KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:52 2014 Check: 00 .. Name: ENSTTRP00000016059/1-585 Len: 594 Check: 9368 Weight: 1.00 Name: ENSBTAP00000018525/1-586 Len: 594 Check: 679 Weight: 1.00 Name: BACU003044/1-298 Len: 594 Check: 4502 Weight: 1.00 Name: bmy_14646T0/1-587 Len: 594 Check: 8363 Weight: 1.00 Name: ENSP00000332325/1-590 Len: 594 Check: 2496 Weight: 1.00 // 1 50 ENSTTRP00000016059/1-585 MSDSPAGSNS RTPES--SGS GGGGKRPAVP AAVSLLPPAD PLRQANRLPI ENSBTAP00000018525/1-586 MSDSPAGSNP RTPESSGSGS GGGGKR---P AAVSLLPPAD PLRQANRLPI BACU003044/1-298 ---------- ---------- ---------- ---------- ---------- bmy_14646T0/1-587 MSDSPAGSNS RTPES--SGS GGGGKRPAVP AAVSLLPPAD PLRQANRLPI ENSP00000332325/1-590 MSDSPAGSNP RTPESSGSGS GGGGKRPAVP AAVSLLPPAD PLRQANRLPI 51 100 ENSTTRP00000016059/1-585 RVXXXXXXXX XXXXXXXXXX XXXXXXXXXX XLDAKKSPLA LLAQTCSQIG ENSBTAP00000018525/1-586 RVLKMLSAHT GHLLHPEYLQ PLSSTPVSPI ELDAKKSPLA LLAQTCSQIG BACU003044/1-298 ---------- ---------- ---------- ---------- ---------- bmy_14646T0/1-587 RVLKMLSAHT GHLLHPEYLQ PLSSTPVSPI ELDAKKSPLA LLAQTCSQIG ENSP00000332325/1-590 RVLKMLSAHT GHLLHPEYLQ PLSSTPVSPI ELDAKKSPLA LLAQTCSQIG 101 150 ENSTTRP00000016059/1-585 KPDPPPSSKL NSV-AAANGL GAEKDPGRSA SGAASASAAL KQLGDSPAED ENSBTAP00000018525/1-586 KPDPPPSSKL NSV-AAANGL GAEKDPGRSA SGAASASAAL KQLGDSPAED BACU003044/1-298 ---------- ---------- ---------- ---------- ---------- bmy_14646T0/1-587 KPDPPPSSKL NSV-AAANGL GAEKDPGRSA SGAASASAAL KQLGDSPTED ENSP00000332325/1-590 KPDPPPSSKL NSVAAAANGL GAEKDPGRSA PGAASAAAAL KQLGDSPAED 151 200 ENSTTRP00000016059/1-585 KSSFKPYSKG SGGGDSRKDS GSSSV-SSTS SSSSLSPGDK AGFRVPSAAC ENSBTAP00000018525/1-586 KSSFKPYSKG SGGGDSRKDS GSSSVSSSSS SSSSLSPGDK AGFRVPSAAC BACU003044/1-298 ---------- ---------- ---------- ---------- ---------- bmy_14646T0/1-587 KSSFKPYSKG SGGGDSRKDS SSSSV-SST- SSSSLSPGDK AGFRVPSAAC ENSP00000332325/1-590 KSSFKPYSKG SGGGDSRKDS GSSSV-SSTS SSSSSSPGDK AGFRVPSAAC 201 250 ENSTTRP00000016059/1-585 TPFPPHGAPV SASSSSSSPG GSRGGSPHHS DCKTGGGGAG GELDKIDQEP ENSBTAP00000018525/1-586 TPFPPHGAPV SASSSSSSPG GSRGGSPHHS DCKTG---AS GELDKKDQES BACU003044/1-298 ---------- ---------- ---------- ---------- -----MEAAP bmy_14646T0/1-587 TPFPPHGVPV SASSSSSSPG GSRGGSPHHS DCKTGGGGAG GELDKKDQEP ENSP00000332325/1-590 PPFPPHGAPV SASSSSSSPG GSRGGSPHHS DCKNGGGVGG GELDKKDQEP 251 300 ENSTTRP00000016059/1-585 KPSPEPAAVS RGSGGE-GAH ---GGAEAGV SGRKXXXXXX XXXXXXXXXX ENSBTAP00000018525/1-586 KPSPEPAAVS RSSSGDPGPH GGGGGGEPGA SGRKSEPPSA LVGAGHVAPV BACU003044/1-298 RPGPPGASRS R--------- ---------- ---------- ---------- bmy_14646T0/1-587 KPSPEPAAVS RGSGGEPGAH --GGGAEAGA SGRKSEPPSA LVGAGHVAPV ENSP00000332325/1-590 KPSPEPAAVS RGGGGEPGAH ---GGAESGA SGRKSEPPSA LVGAGHVAPV 301 350 ENSTTRP00000016059/1-585 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000018525/1-586 SPYKPGHSVF PLPPSSIGYH GSIVGAYAGY PSQFVPGLDP SKSGLVGGQL BACU003044/1-298 ---------- --PPRCIGYH GSIVGAYAGY PSQFVPGLDP SKSGLVGGQL bmy_14646T0/1-587 SPYKPGHSVF PLPPSSIGYH GSIVGAYAGY PSQFVPGLDP SKSGLVGGQL ENSP00000332325/1-590 SPYKPGHSVF PLPPSSIGYH GSIVGAYAGY PSQFVPGLDP SKSGLVGGQL 351 400 ENSTTRP00000016059/1-585 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000018525/1-586 SGGLGLPPGK PPQLQPAHRG LPTVLPAGIM PETSTAWEVT APRTSAARAA BACU003044/1-298 SGGLGLPPGK PPSPSPLTGA SPPSFLQGLC RDPYCLGGYH GASHLGGSSC bmy_14646T0/1-587 SGGLGLPPGK PPSSSPLTGA SPPSFLQGLC RDPYCLGGYH GASHLGGSSC ENSP00000332325/1-590 SGGLGLPPGK PPSSSPLTGA SPPSFLQGLC RDPYCLGGYH GASHLGGSSC 401 450 ENSTTRP00000016059/1-585 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000018525/1-586 PRAARTTRPG P-LKAGGYPL VYPGHPLQPA ALSSSAAQAA LPGHPLYTYG BACU003044/1-298 STCSAHDPAA PGLKAGGYPL VYPGHPLQPA ALSSSAAQAA PPGHPLYPYG bmy_14646T0/1-587 STCSAHDPAA PGLKAGGYPL VYPGHPLQPA ALSSSAAQAA LPGHPLYTYG ENSP00000332325/1-590 STCSAHDPAG PSLKAGGYPL VYPGHPLQPA ALSSSAAQAA LPGHPLYTYG 451 500 ENSTTRP00000016059/1-585 XXXXXXXXXX XXXXXXXXXX XXXXLATWKK LLSHLRIHTA MTGAEKLLSA ENSBTAP00000018525/1-586 FMLQNEPLPH SCNWVAASGP CDKRFATSEE LLSHLRTHTA LPGAEKLLAT BACU003044/1-298 FMLQNEPLPH SCNWVAASGP CDKRFATSEE LLSHLRTHTA LPGAEKLLAA bmy_14646T0/1-587 FMLQNEPLPH SCNWVAASGP CDKRFATSEE LLSHLRTHTA LPGAEKLLAA ENSP00000332325/1-590 FMLQNEPLPH SCNWVAASGP CDKRFATSEE LLSHLRTHTA LPGAEKLLAA 501 550 ENSTTRP00000016059/1-585 YPGTSGQGSA TAADAVAASC HLHLPPPTAP SRHRSLSLRS PHTLG-SRYH ENSBTAP00000018525/1-586 YPGASGLGSA AAAAAAAASC HLHLPPPAAP GSPGSLSLRS PHTLGLNRYH BACU003044/1-298 YPGASGLGSA AAAAAAAASC HLHLPPPTAP GSPGSLSLRS PHTLGLSRYH bmy_14646T0/1-587 YPGASGLGSA AAAAAAAASC HLHLPPPTAP GSPGSLSLRS PHTLGLSRYH ENSP00000332325/1-590 YPGASGLGSA AAAAAAAASC HLHLPPPAAP GSPGSLSLRN PHTLGLSRYH 551 600 ENSTTRP00000016059/1-585 PYGKSHLSTA GGLAVPSLTT AGPYYSPYAQ YGQRLASASA LGYQ ENSBTAP00000018525/1-586 PYGKSHLSTA GGLAVPSLPT AGPYYSPYAL YGQRLASASA LGYQ BACU003044/1-298 PYGKSHLSTA GGLAVPSLPT AGPYYSPYAL YGQRLASASA LGYQ bmy_14646T0/1-587 PYGKSHLSTA GGLAVPSLPT AGPYYSPYAL YGQRLASASA LGYQ ENSP00000332325/1-590 PYGKSHLSTA GGLAVPSLPT AGPYYSPYAL YGQRLASASA LGYQ