KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:04:53 2014 Check: 00 .. Name: ENSTTRP00000010063/1-680 Len: 703 Check: 9399 Weight: 1.00 Name: bmy_11151T0/1-640 Len: 703 Check: 8754 Weight: 1.00 Name: ENSP00000315379/1-683 Len: 703 Check: 8531 Weight: 1.00 Name: ENSBTAP00000018533/1-683 Len: 703 Check: 8531 Weight: 1.00 Name: BACU007224/1-655 Len: 703 Check: 2708 Weight: 1.00 // 1 50 ENSTTRP00000010063/1-680 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH bmy_11151T0/1-640 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH ENSP00000315379/1-683 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH ENSBTAP00000018533/1-683 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH BACU007224/1-655 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH 51 100 ENSTTRP00000010063/1-680 LKPFLDDSTL RFVDKLFEAV EEGRSSRHSK SSSDRSRKRE LKEVFGDDSE bmy_11151T0/1-640 LKPFLDDSTL RFVDKLFEAV EEGRSSRHSK SSSDRSRKRE LKEVFGDDSE ENSP00000315379/1-683 LKPFLDDSTL RFVDKLFEAV EEGRSSRHSK SSSDRSRKRE LKEVFGDDSE ENSBTAP00000018533/1-683 LKPFLDDSTL RFVDKLFEAV EEGRSSRHSK SSSDRSRKRE LKEVFGDDSE BACU007224/1-655 LKPFLDDSTL RFVDKLFEAV EEGRSSRHSK SSSDRSRKRE LKEVFGDDSE 101 150 ENSTTRP00000010063/1-680 ISKESSGVKK RRIPRFEEVE EEPEVIPGPP SESPGMLTKL QIKQMMEAAT bmy_11151T0/1-640 ISKESSGVKK RRIPRFEEVE EEPEVIPGPP SESPGMLTKL QIKQMMEAAT ENSP00000315379/1-683 ISKESSGVKK RRIPRFEEVE EEPEVIPGPP SESPGMLTKL QIKQMMEAAT ENSBTAP00000018533/1-683 ISKESSGVKK RRIPRFEEVE EEPEVIPGPP SESPGMLTKL QIKQMMEAAT BACU007224/1-655 ISKESSGVKK RRIPRFEEVE EEPEVIPGPP SESPGMLTKL ---------- 151 200 ENSTTRP00000010063/1-680 RQIEERKKQL SFISPPTPQP KTPSSSQPER LPIGNTIQPS QAATFMNDAI bmy_11151T0/1-640 RQIEERKKQL SFISPPTPQP KTPSSSQPER LPIGNTIQPS QAATFMNDAI ENSP00000315379/1-683 RQIEERKKQL SFISPPTPQP KTPSSSQPER LPIGNTIQPS QAATFMNDAI ENSBTAP00000018533/1-683 RQIEERKKQL SFISPPTPQP KTPSSSQPER LPIGNTIQPS QAATFMNDAI BACU007224/1-655 ---------- --------QP KTPSSSQPER LPIGNTIQPS QAATFMNDAI 201 250 ENSTTRP00000010063/1-680 EKARKAAELQ ARIQAQLALK PGLIGNANMV GLANLHAMGI APPKVELKDQ bmy_11151T0/1-640 EKARKAAELQ ARIQAQLALK PGLIGNANMV GLANLHAMGI APPKVELKDQ ENSP00000315379/1-683 EKARKAAELQ ARIQAQLALK PGLIGNANMV GLANLHAMGI APPKVELKDQ ENSBTAP00000018533/1-683 EKARKAAELQ ARIQAQLALK PGLIGNANMV GLANLHAMGI APPKVELKDQ BACU007224/1-655 EKARKAAELQ ARIQAQLALK PGLIGNANMV GLANLHAMGI APPKVELKDQ 251 300 ENSTTRP00000010063/1-680 TKPTPLILDE QGRTVDATGK EIELTHRMPT LKANIRAVKR EQFKQQLKEK bmy_11151T0/1-640 TKPTPLILDE QGRTVDATGK EIELTHRMPT LKANIRAVKR EQFKQQLKEK ENSP00000315379/1-683 TKPTPLILDE QGRTVDATGK EIELTHRMPT LKANIRAVKR EQFKQQLKEK ENSBTAP00000018533/1-683 TKPTPLILDE QGRTVDATGK EIELTHRMPT LKANIRAVKR EQFKQQLKEK BACU007224/1-655 TKPTPLILDE QGRTVDATGK EIELTHRMPT LKANIRAVKR EQFKQQLKEK 301 350 ENSTTRP00000010063/1-680 PSEDMESNTF FDPRVSIAPS QRQRRTFKFH DKGKFEKIAQ RLRTKAQLEK bmy_11151T0/1-640 PSEDMESNTF FDPRVSIAPS QRQRRTFKFH DKGKFEKIAQ RLRTKAQLEK ENSP00000315379/1-683 PSEDMESNTF FDPRVSIAPS QRQRRTFKFH DKGKFEKIAQ RLRTKAQLEK ENSBTAP00000018533/1-683 PSEDMESNTF FDPRVSIAPS QRQRRTFKFH DKGKFEKIAQ RLRTKAQLEK BACU007224/1-655 PSEDMESNTF FDPRVSIAPS QRQRRTFKFH DKGKFEKIAQ RLRTKAQLEK 351 400 ENSTTRP00000010063/1-680 LQAEISQAAR KTGIHTSTRL ALIAPKKELK EGDVPEIEWW DSYIIPNGFD bmy_11151T0/1-640 LQAEISQAAR KTGIHTSTRL ALIAPKKELK EGDIPEIEWW DSYIIPNGFD ENSP00000315379/1-683 LQAEISQAAR KTGIHTSTRL ALIAPKKELK EGDIPEIEWW DSYIIPNGFD ENSBTAP00000018533/1-683 LQAEISQAAR KTGIHTSTRL ALIAPKKELK EGDIPEIEWW DSYIIPNGFD BACU007224/1-655 LQAEISQAAR KTGIHTSTRL ALIAPKKELK EGDIPEIEWW DSYIIPNGFD 401 450 ENSTTRP00000010063/1-680 LTEENPKRED YFGITNLVEH PAQLNPPVDN DTPVTLGVYL TKKEQKKLRR bmy_11151T0/1-640 L--------- ---------- -------LQN LTPVVSII-- ---------- ENSP00000315379/1-683 LTEENPKRED YFGITNLVEH PAQLNPPVDN DTPVTLGVYL TKKEQKKLRR ENSBTAP00000018533/1-683 LTEENPKRED YFGITNLVEH PAQLNPPVDN DTPVTLGVYL TKKEQKKLRR BACU007224/1-655 LTEENPKRED YFGITNLVEH PAQLNPPVDN DTPVTLGVYL TKKEQKKLRR 451 500 ENSTTRP00000010063/1-680 QTRREAQKEL QEKVRLGLMP PPEPKVR-SN LMRVLGTEAV QDPT-VEAHV bmy_11151T0/1-640 ---------- ---------- -----IRISN LMRVLGTEAV QDPTKVEAHV ENSP00000315379/1-683 QTRREAQKEL QEKVRLGLMP PPEPKVRISN LMRVLGTEAV QDPTKVEAHV ENSBTAP00000018533/1-683 QTRREAQKEL QEKVRLGLMP PPEPKVRISN LMRVLGTEAV QDPTKVEAHV BACU007224/1-655 QTRREAQKEL QEKVRLGLMP PPEPKVRISN LMRVLGTEAV QDPTKVEAHV 501 550 ENSTTRP00000010063/1-680 RAQM-KRQXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXVRN bmy_11151T0/1-640 RAQMAKRQKA HEEANAARKL TAEQRKVKKI KKLKEDISQG VHISVYRVRN ENSP00000315379/1-683 RAQMAKRQKA HEEANAARKL TAEQRKVKKI KKLKEDISQG VHISVYRVRN ENSBTAP00000018533/1-683 RAQMAKRQKA HEEANAARKL TAEQRKVKKI KKLKEDISQG VHISVYRVRN BACU007224/1-655 RAQMAKRQKA HEEANAARKL TAEQRKVKKI KKLKEDISQG VHISVYRVRN 551 600 ENSTTRP00000010063/1-680 LSNPAKKFKI EANAGQLYLT GVVVLHKDVN VVVVEGGPKA QKKFKRLMLH bmy_11151T0/1-640 LSNPAKKFKI EANAGQLYLT GVVVLHKDVN VVVVEGGPKA QKKFKRLMLH ENSP00000315379/1-683 LSNPAKKFKI EANAGQLYLT GVVVLHKDVN VVVVEGGPKA QKKFKRLMLH ENSBTAP00000018533/1-683 LSNPAKKFKI EANAGQLYLT GVVVLHKDVN VVVVEGGPKA QKKFKRLMLH BACU007224/1-655 LSNPAKKFKI EANAGQLYLT GVVVLHKDVN VVVVEGGPKA QKKFKRLMLH 601 650 ENSTTRP00000010063/1-680 RIKWDEQTSN TKGD------ ---------D DEESDEEAVK KTNKCVLVWE bmy_11151T0/1-640 RIKWDEQTSN TKGDGEWGLE HDLAVLSFPD DEESDEEAVK KTNKCVLVWE ENSP00000315379/1-683 RIKWDEQTSN TKGD------ ---------D DEESDEEAVK KTNKCVLVWE ENSBTAP00000018533/1-683 RIKWDEQTSN TKGD------ ---------D DEESDEEAVK KTNKCVLVWE BACU007224/1-655 RIKWDEQTSN TKGD------ ---------D DEESDEEAVK KTNKCVLVWE 651 700 ENSTTRP00000010063/1-680 -----GTAKD RSFGEMKFKQ CPTENMAREH FKKHGAEHYW DLALSESVLE bmy_11151T0/1-640 VACACGTAKD RSFGEMKFKQ CPTENMAREH FKKHGAEHYW DLALSESVLE ENSP00000315379/1-683 -----GTAKD RSFGEMKFKQ CPTENMAREH FKKHGAEHYW DLALSESVLE ENSBTAP00000018533/1-683 -----GTAKD RSFGEMKFKQ CPTENMAREH FKKHGAEHYW DLALSESVLE BACU007224/1-655 -----GTAKD RSFGEMKFKQ CPTENMAREH FKKHGAEHYW DLALSESVLE 701 750 ENSTTRP00000010063/1-680 STD bmy_11151T0/1-640 STD ENSP00000315379/1-683 STD ENSBTAP00000018533/1-683 STD BACU007224/1-655 STD