KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:00 2014 Check: 00 .. Name: ENSTTRP00000010106/1-661 Len: 766 Check: 389 Weight: 1.00 Name: ENSP00000392395/1-664 Len: 766 Check: 5680 Weight: 1.00 Name: BACU009014/1-761 Len: 766 Check: 956 Weight: 1.00 Name: ENSBTAP00000018544/1-663 Len: 766 Check: 973 Weight: 1.00 Name: bmy_14781T0/1-522 Len: 766 Check: 5176 Weight: 1.00 // 1 50 ENSTTRP00000010106/1-661 MERPGEGEQP PQQQPWGRLL RLGAEEGEPH ---------- VLLRKREWTI ENSP00000392395/1-664 MERPEEGKQS PPPQPWGRLL RLGAEEGEPH ---------- VLLRKREWTI BACU009014/1-761 ---MGAGDGV RVLVDWIRGL RGGAGRDRAH RAVGGPWAGR VLLPRFSGGM ENSBTAP00000018544/1-663 MERPGEGEQP PQQQPWGRLL RLGAEEGEPH ---------- VLLRKREWTI bmy_14781T0/1-522 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010106/1-661 GRR------- ---------- --RGCDLSFP GNKLVSGDHC KIIVDEKSGQ ENSP00000392395/1-664 GRR------- ---------- --RGCDLSFP SNKLVSGDHC RIVVDEKSGQ BACU009014/1-761 GRRVTAAVYS RIGRPSYFCV FHAGCDLSFP GNKLVSGDHC KIIVDEKSGQ ENSBTAP00000018544/1-663 GRR------- ---------- --RGCDLSFP GNKLVSGDHC KITVDEKSGQ bmy_14781T0/1-522 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010106/1-661 VSLEDTSTNG TVINKLKVVK KQTCPLQTGD VIYLVYRKNE PEHNVAYLYE ENSP00000392395/1-664 VTLEDTSTSG TVINKLKVVK KQTCPLQTGD VIYLVYRKNE PEHNVAYLYE BACU009014/1-761 VSLEDTSTNG TVINKLKVVK KQTCPLQTGD VIYLVYRKNE PEHNVAYLYE ENSBTAP00000018544/1-663 VSLEDTSANG TVINKLKVVK KQTCPLQTGD VIYLVYRKNE PEHNVAYLYE bmy_14781T0/1-522 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010106/1-661 SFHEKQGVTQ DSFEANKENV FHVTKDTSGA ARR-RP-DPQ VLPSPPATQV ENSP00000392395/1-664 SLSEKQGMTQ ESFEANKENV FHGTKDTSGA GAG-RGADPR VPPSSPATQV BACU009014/1-761 SLHEKQGVTR DSFEANKENV FHVTKDTSGA GRGDDPQDPQ VLPSPPATQV ENSBTAP00000018544/1-663 SLNEKQGVTQ DSFEANKENV FHVTKDTSGA GRGDDPQDPQ VLLSSPATQV bmy_14781T0/1-522 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010106/1-661 CFEEPQPSTS TSDLFPTAST SSMEPTSAGR GPPSSSGSRG ADVSPKGCGP ENSP00000392395/1-664 CFEEPQPSTS TSDLFPTASA SSTEPSPAGR ERSSSCGSGG GGISPKGSGP BACU009014/1-761 CFEEPQPSTS TSDLFPTAST SSTEPTSAGR GPASSSGSRG ADVSPKGCGP ENSBTAP00000018544/1-663 CFEEPQPSTS TSDLFPTAST SSMEPTSAGR GPPSSSSSRG TDISPKGCGP bmy_14781T0/1-522 ---------- ---------- --MEPTSAGR GPASSSGSRG ADVSPKGCGP 251 300 ENSTTRP00000010106/1-661 SVASDEVVIF PLALPAREGA SFSLSEPKDQ EDLEPVKKRV KADGEPALNL ENSP00000392395/1-664 SVASDEVSSF ASALPDRKTA SFSSLEPQDQ EDLEPVKKKM RGDGDLDLNG BACU009014/1-761 SVASDEIASF PLALSEREGA SFSPSEPQDQ EELEPVKKRV KADGEPTLNL ENSBTAP00000018544/1-663 SVTSDEISSF PLTLPDREGA SFSLSEPQDQ EDLEPVKKRV KAVGEPDLNL bmy_14781T0/1-522 SVASDEITSF PLALSEREGA SFSPSEPQDQ EELEPVKKRV KADGEPALNL 301 350 ENSTTRP00000010106/1-661 P-LVTDPGRD PHSTL-DVRA ATVKPDKMEE TLTCIICQDL LHDCVSLQPC ENSP00000392395/1-664 QLLVAQPRRN AQTVHEDVRA AAGKPDKMEE TLTCIICQDL LHDCVSLQPC BACU009014/1-761 PMLVADPGGD PQSAL-DVRA ATVKPDKMEE TLTCIICQDL RHDCVSLQPC ENSBTAP00000018544/1-663 PILVTDPGRD PPAAL-DVRA EAMKPDKMEE TLTCIICQDL LHDCVSLQPC bmy_14781T0/1-522 PMLVADPGGD PHSAL-DVRA ATVKPDKMEE TLTCIICQDL LHDCVSLQPC 351 400 ENSTTRP00000010106/1-661 MHTFCAACYS GWMERSALCP TCRCPVERIC KNHILNNLVE AYLLQHPDKR ENSP00000392395/1-664 MHTFCAACYS GWMERSSLCP TCRCPVERIC KNHILNNLVE AYLIQHPDKS BACU009014/1-761 MHTFCAACYS GWMERSALCP TCRCPVERIC KNHILNDLVE AYLLQHPDKR ENSBTAP00000018544/1-663 MHTFCAACYS GWMERSALCP TCRCPVERIC KNHILNNLVE AYLLQHPDKR bmy_14781T0/1-522 MHTFCAACYS GWMERSALCP TCRCPVERIC KNHILNNLVE AYLLQHPDKR 401 450 ENSTTRP00000010106/1-661 RSEEDVRSMA ARNRITQDML QPKVRRAFSD EEGSSEDLLE LSDVDSESSD ENSP00000392395/1-664 RSEEDVQSMD ARNKITQDML QPKVRRSFSD EEGSSEDLLE LSDVDSESSD BACU009014/1-761 RSEEDLRSMA ARNRITQDML QPKVRRAFSD EEGSSEDLLE LSDVDSESSD ENSBTAP00000018544/1-663 RSEEDLRSMA ARNKITQDML QPKVRRAFSD EEGSSEDLLE LSDVDSESSD bmy_14781T0/1-522 RSEEDLRSMA ARNRITQDML QPKVRRAFSD EEGSSEDLLE LSDVDSESSD 451 500 ENSTTRP00000010106/1-661 VSQPYIVCRQ CPEYRRQAGR PLPCPGPGSE PGAPQAPGDA PSTSASITTX ENSP00000392395/1-664 ISQPYVVCRQ CPEYRRQAAQ PPHCPAPEGE PGAPQALGDA PSTSVSLTTA BACU009014/1-761 VSQPYIVCRQ CPEYRRQAGR PLPCPGPGSE PGAPQAPGDA PSTSVSITTA ENSBTAP00000018544/1-663 VSQPSIVCRQ CPEYRRQAGQ PLPYPGPGSE PGAPQVPGDA PSTSASVTAA bmy_14781T0/1-522 VSQPYIVCRQ CPEYRRQAGR PLPCPGPGSE PGAPQAPGDA PSTSVSITTA 501 550 ENSTTRP00000010106/1-661 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AICLQPFCHL ENSP00000392395/1-664 VQDYVCPLQG SHALCTCCFQ PMPDRRAERE QDPRVAPQQC AVCLQPFCHL BACU009014/1-761 -QDYVCALQG SHAICTCCFQ PMPDRRAERE RDPRIAPQQC AICLQPFCHL ENSBTAP00000018544/1-663 -QDYVCALQG SHAICTCCFQ PMPDRRAERE RDPRIAPQQC AICLQPFCHL bmy_14781T0/1-522 -QDYVCALQG SHAICTCCFQ PMPDRRAERE RDPRIAPQQC AICLQPFCHL 551 600 ENSTTRP00000010106/1-661 YWGCARTGCL GCLAPFCELN LGDRCLDGVL SNNNYESDVL KXXXXXXXXX ENSP00000392395/1-664 YWGCTRTGCY GCLAPFCELN LGDKCLDGVL NNNSYESDIL KNYLATRGLT BACU009014/1-761 YWGCARTGCL GCLAPFRELN LGDRCLDGVL SNNNYESDVL KNYLATRGLT ENSBTAP00000018544/1-663 YWGCARTGCL GCLAPFCELN LGDRCLDGVL SNNNYESDVL KNYLATRGLT bmy_14781T0/1-522 YWGCARTGCL GCLAPFCELN LGDRCLDGVL SNNNYESDVL KNYLATRGLT 601 650 ENSTTRP00000010106/1-661 XXXXXXXXXX XXXXXXXXXX XYRITGNTVL CYCCGLRSFR ELTYQYRQNI ENSP00000392395/1-664 WKNMLTESLV ALQRGVFLLS DYRVTGDTVL CYCCGLRSFR ELTYQYRQNI BACU009014/1-761 WKNMLTESLG ALQRGAFLLS DYRITGNTVL CYCCGLRSFR ELTYQYRQNI ENSBTAP00000018544/1-663 WKNMLTESLG ALQRGVFLLS DYRITGNTVL CYCCGLRSFR ELTYQYRQNI bmy_14781T0/1-522 WKNMLTESLG ALQRGAFLLS DHRITGNTVL CYCCGLRSFR ELTYQYRQNI 651 700 ENSTTRP00000010106/1-661 PASELPVAVT SRPDCYWGRN CRTQVKAHHA MK--FNHI-- ---------- ENSP00000392395/1-664 PASELPVAVT SRPDCYWGRN CRTQVKAHHA MK--FNHI-- ---------- BACU009014/1-761 PASELPVAVT SRPDCYWGRN CRTQVKAHHA IPQLSSKLTQ VNWWPPHQFK ENSBTAP00000018544/1-663 PASELPAAVT SRPDCYWGRN CRTQVKAHHA MK--FNHI-- ---------- bmy_14781T0/1-522 PASELPVAVT SRPDCYWGRN CRTQVKAHHA MNTIFNFVLL LIQTLRSSAP 701 750 ENSTTRP00000010106/1-661 ---------- ---------- ---------- ---------C EQTRFKN--- ENSP00000392395/1-664 ---------- ---------- ---------- ---------C EQTRFKN--- BACU009014/1-761 QKPVPDPKAD EQPDPSPSPP SGRQHPDGCF PVPSPPVLSS TGVRFTVSHA ENSBTAP00000018544/1-663 ---------- ---------- ---------- ---------C EQTRFKN--- bmy_14781T0/1-522 WKKASFLRSN KQAVSVSLPG MFAR----VL VVMCPFLSRC ERLQASLITC 751 800 ENSTTRP00000010106/1-661 ---------- ------ ENSP00000392395/1-664 ---------- ------ BACU009014/1-761 ITSSTLPSGS EPWLGR ENSBTAP00000018544/1-663 ---------- ------ bmy_14781T0/1-522 ---------- ------