KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:00 2014 Check: 00 .. Name: BACU009522/1-387 Len: 424 Check: 8164 Weight: 1.00 Name: ENSP00000365773/1-370 Len: 424 Check: 4272 Weight: 1.00 Name: ENSBTAP00000018554/1-370 Len: 424 Check: 5444 Weight: 1.00 Name: bmy_21856T0/1-332 Len: 424 Check: 1025 Weight: 1.00 Name: ENSTTRP00000013190/1-370 Len: 424 Check: 7158 Weight: 1.00 // 1 50 BACU009522/1-387 ---------- ---------- ---------- -------MGG WLLAGTSCAT ENSP00000365773/1-370 ---------- ---------- ---------- --------MD APRQVVNFGP ENSBTAP00000018554/1-370 ---------- ---------- ---------- --------MD SLMPVVNFGP bmy_21856T0/1-332 MGAPVRRWKK ARSRRRLQTC AAHAIGPFQQ TPSSRFRTMD SLMQVVNFGP ENSTTRP00000013190/1-370 ---------- ---------- ---------- --------MD SLMQVVNFGP 51 100 BACU009522/1-387 GLKGLDRMPV LSSYSLQHAA FLCSKPTGPS LPLSQGGQSR PAIAEMSHRS ENSP00000365773/1-370 GPAKLPHSVL LE----IQKE LLDYKGVGIS ---------- --VLEMSHRS ENSBTAP00000018554/1-370 GPAKLPRSVL LE----MQKE LLDYKGIGIS ---------- --VLEMSHRS bmy_21856T0/1-332 GPAKLPRSVL SE----IQKE LLDYKGVGIS ---------- --VLEMSHRS ENSTTRP00000013190/1-370 GPAKLPRSVL SE----IQKE LLDYKGVGIS ---------- --VLEMSHRS 101 150 BACU009522/1-387 SDFSKIINNT ENLVRELLAI PDNYKVIFVQ GGGCGQFSAV PLNLIGLKAG ENSP00000365773/1-370 SDFAKIINNT ENLVRELLAV PDNYKVIFLQ GGGCGQFSAV PLNLIGLKAG ENSBTAP00000018554/1-370 SDFSKIINKT ETLVRELLAI PDNYKVIFVQ GGGCGQFSAV PLNLIGLKAG bmy_21856T0/1-332 SDFSKIINNT ENLVRELLAV PDNYKVIFVQ GGGCGQFSAV PLNLIGLKAG ENSTTRP00000013190/1-370 SDFSKIINNT ENLVRELLAI PDNYKVIFVQ GGGCGQFSAV PLNLIGLKAG 151 200 BACU009522/1-387 RCADYVVTGS WSAKAAEEAK KFGTVNIVHP KLGSYTKIPD PSTWNLSPDA ENSP00000365773/1-370 RCADYVVTGA WSAKAAEEAK KFGTINIVHP KLGSYTKIPD PSTWNLNPDA ENSBTAP00000018554/1-370 RCADYVVTGS WSAKAAEEAK KFGTVNIVHP KLGSYTKIPD PSTWTLNPDA bmy_21856T0/1-332 RCADYVVTGS WSAKAVEEAK KIGTVNIVHP KLGSYTKIPD PSTWNLSPDA ENSTTRP00000013190/1-370 RCADYVVTGS WSAKAAEEAK KFGTVNIVHP KLGSYTKIPD PSTWNLSPDA 201 250 BACU009522/1-387 SYVYYCANET VHGVEFDFIP DVNGAVLVCD MSSNFLSKPV DVSKFGVIFA ENSP00000365773/1-370 SYVYYCANET VHGVEFDFIP DVKGAVLVCD MSSNFLSKPV DVSKFGVIFA ENSBTAP00000018554/1-370 SYVYYCANET VHGVEFDFIP DVKGAVLVCD MSSNFLSRPV DVSKFGVIFA bmy_21856T0/1-332 SYVYYCANET VHGVEFDFIP DVKGAVLVCD MSSNFLSKPV DVSKFGVIFA ENSTTRP00000013190/1-370 SYVYYCANET VHGVEFDFIP DVKGAVLVCD MSSNFLSKPV DVSKFGAIFA 251 300 BACU009522/1-387 GAQKNVGSAG VTVVIVRDDL LGFALRECPS VLDYKVQAGN NSLYNTPPCF ENSP00000365773/1-370 GAQKNVGSAG VTVVIVRDDL LGFALRECPS VLEYKVQAGN SSLYNTPPCF ENSBTAP00000018554/1-370 GAQKNVGSAG VTVVIIRDDL LGFALKECPS VLDYKVQAGN NSLYNTPPCF bmy_21856T0/1-332 GAQKNVGSAG VTVVIVRDDL LGFALRECPS VLDYKVQAGN NSLYNTPPCF ENSTTRP00000013190/1-370 GAQKNVGSAG VTVVIVRDDL LGFALRECPS VLDYKVQAGN NSLYNTPPCF 301 350 BACU009522/1-387 SIYVMGLVLE WIKNNGGAAA MEKLSSIKSQ MIYDIVDNSQ GFYVCPVEPQ ENSP00000365773/1-370 SIYVMGLVLE WIKNNGGAAA MEKLSSIKSQ TIYEIIDNSQ GFYVCPVEPQ ENSBTAP00000018554/1-370 SIYVMGLVLE WIKNNGGAAA MEKLSSIKSQ MIYDIIDNSQ GFYVCPVEPQ bmy_21856T0/1-332 R--------- ---------- ---------- ---------- ----CPVEPQ ENSTTRP00000013190/1-370 SIYVMGLVLE WIKNNGGAAA MEKLSSIKSQ MIYEIVDNSQ GFYVCPVEPQ 351 400 BACU009522/1-387 NRSRMNIPFR IGNTKGDDAL EKRFLDKALE LNMISLKGHR SVGGIRASLY ENSP00000365773/1-370 NRSKMNIPFR IGNAKGDDAL EKRFLDKALE LNMLSLKGHR SVGGIRASLY ENSBTAP00000018554/1-370 NRSKMNIPFR IGNTKGDDAL EKRFLDKALE LNMISLKGHR SVGGIRVSLY bmy_21856T0/1-332 NRSRMNIPFR IGNTKGDDAL EKRFLDKALE LNMISLKGHR A--------- ENSTTRP00000013190/1-370 NRSRMNIPFR IGNTKGDDAL EKRFLDKALE LNMISLKGHR SVGGIRASLY 401 450 BACU009522/1-387 NAVTIEDVQK LAAFMKHFLE MHQL ENSP00000365773/1-370 NAVTIEDVQK LAAFMKKFLE MHQL ENSBTAP00000018554/1-370 NAVTVEDVQK LAAFMKNFLE MHQL bmy_21856T0/1-332 ---------- ---------- ---- ENSTTRP00000013190/1-370 NAVTIEDVQK LAAFMKNFLE MHQL