KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:01 2014 Check: 00 .. Name: ENSP00000318883/1-485 Len: 569 Check: 5760 Weight: 1.00 Name: bmy_08981T0/1-527 Len: 569 Check: 2796 Weight: 1.00 Name: ENSBTAP00000018555/1-279 Len: 569 Check: 9104 Weight: 1.00 Name: BACU007539/1-411 Len: 569 Check: 6180 Weight: 1.00 Name: ENSTTRP00000015099/1-448 Len: 569 Check: 2989 Weight: 1.00 // 1 50 ENSP00000318883/1-485 ---------- ---------- ---------- ---------- ---------- bmy_08981T0/1-527 MRSFLAALRR PRSPAPPPAP YPQGPAPHPA LRRRSSRDST LGQPARLQLL ENSBTAP00000018555/1-279 ---------- ---------- ---------- ---------- ---------- BACU007539/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015099/1-448 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000318883/1-485 -MASSSTVP- -LGFHYETKY VVL------S YLGLLSQEKL QEQHLSSP-- bmy_08981T0/1-527 RRASPTSAPT TLGPSESASF PAVQGGHPPG TIELLPKRRA GRERAALPGH ENSBTAP00000018555/1-279 -MASSTTVP- -LGFHYETKY VVL------S YLGLLSQEKL QEQPASSP-- BACU007539/1-411 -MASSTTVP- -LGFHYETKY VVL------S YLGLLSLEKL QEQHLSSP-- ENSTTRP00000015099/1-448 -MASSTTVP- -LGFHYETKY VVL------S YLGLLSLEKL QEQHLSSP-- 101 150 ENSP00000318883/1-485 ---------- -----QGVQL DIASQSLDQE ILLKVKTEIE EELKSLDKEI bmy_08981T0/1-527 IYTNRPPGLR GPGFLSGVQQ DIASQSLDQE VLLKVKTEIE EELKSLDKEI ENSBTAP00000018555/1-279 ---------- -----QGVQQ DTVSQSLDQE VLLKVKTEIE EELKSLDKEI BACU007539/1-411 ---------- -----QGVQQ DIASQSLDQE VLLKVKTEIE EELKSLDKEI ENSTTRP00000015099/1-448 ---------- -----QGVQQ DIASQSLDQE VLLKVKTEIE EELKSLDKEI 151 200 ENSP00000318883/1-485 SEAFTSTGFD RHTSPVFSPA NPESSMEDCL AHLGEKVSQE LKEPLHKALQ bmy_08981T0/1-527 SEAFASTGFD RHTSPVFSPA NPDSSVEDCL AHLGEKASQE LRAPLLGALQ ENSBTAP00000018555/1-279 SEAFASTGFD RHTSPVFSPA NPDSSVEDCL AHLGEKAAQE LRAPLLGALQ BACU007539/1-411 SEAFASTGFD RHTSPVFSPA NPDSSVEDCL AHLGEKASQE LRAPLLGALQ ENSTTRP00000015099/1-448 CEAFASTGFD RHTSPVFSPA NPDSSVEDCL AHLGEKASQE LRAPLLGALQ 201 250 ENSP00000318883/1-485 MLLSQPVTYQ AFRECTLETT VHASGWNKIL VPLVLLRQML LELTRRGQEP bmy_08981T0/1-527 TLLSRPLTYQ AYRECTLETT VHASGWNKVL VPLILLRQML LELTRRGQEP ENSBTAP00000018555/1-279 TLLSRPVTYQ AYRECTLETT VHASGWNKIL VPLILLRQML LELTKRGQEP BACU007539/1-411 TLLSRPLTYQ AYRECTLETT VHASGWNKVL VPLILLRQML LELTRRGQEP ENSTTRP00000015099/1-448 TLLSRPLTYQ AYRECTVETT VHASGWNKVL VPLILLRQML LELTRRGQEP 251 300 ENSP00000318883/1-485 LSALLQFGVT YLEDYSAEYI IQQGGWGTVF SLESEEEEYP GITAEDSNDI bmy_08981T0/1-527 LSALLEFGVT FLEDHAAEYI IQQGGWGAVF TLEPEDEERP AGAAEDSNDI ENSBTAP00000018555/1-279 LGALLQFGVT FLEDHAAEYI IQQGGWGTVF NLESE-EECP AGAAEDSNDI BACU007539/1-411 LSALLEFGVT FLEDHAAEYI IQQGGWGAVF TLEPEDEERP AGAAEDSNDI ENSTTRP00000015099/1-448 LSALLQFGVT FLEDHAAEYI IQQGGWGAVF ALEPEDEERP AGAAEDSNDI 301 350 ENSP00000318883/1-485 YILPSDNSGQ VSPPESP-TV TTSWQSESLP VSLSASQSWH TESLPVSLGP bmy_08981T0/1-527 YILPSGASTL ASPPESPTTA TASWQAEGFP VSLSSSQSWR TESPPVSLGP ENSBTAP00000018555/1-279 YILPSDSSTH VSPPESPSTA TASWQAESLP VSLSASQSWH TESLP----- BACU007539/1-411 YILPSGASTL ASPPESPTTA TASWQAEGFP VSLSSSQSWR TESPPVSLGP ENSTTRP00000015099/1-448 YILPSGGSTL ASPPESPTTA TASWQAEGFP VSLSSSQSWR TESPPVSLGP 351 400 ENSP00000318883/1-485 ESWQQIAMDP EEVKSLDSNG AGEKSENNSS NSDIVHVEKE EVPEGMEEAA bmy_08981T0/1-527 ESWQQVTVDP EEVKSLDSNG AGEKSENNSS NSDIVHVEKE EIPEGAEAAA ENSBTAP00000018555/1-279 ---------- ---------G LGTQ------ ---------- ---------- BACU007539/1-411 ESWQQVTVDP EEVKSLDNNG AGEKSENNSS NSDIVHVEKE EIPEGAEAAA ENSTTRP00000015099/1-448 ESWQQVTVDP EEVKSLDSNG AGEKSENNSS NSDIVHVEKE EIPEGAEAAA 401 450 ENSP00000318883/1-485 VASVVLPARE LQEALPEAPA PLLPHITATS LLGTREPDTE VITVEKSSPA bmy_08981T0/1-527 AAAPAAPA-- ---------- ---------- LMAAGEPGPE GSAGQTASPT ENSBTAP00000018555/1-279 ---------- ---------- ---------- ---------- ---------- BACU007539/1-411 A---AAPA-- ---------- ---------- LMAAGEPGPK GSAGQTASPT ENSTTRP00000015099/1-448 VAASA----- ---------- ---------- LMAAGEPGPE GSAGQPASPT 451 500 ENSP00000318883/1-485 TSLFVELDEE EVKAATTEPT EVE-EVVPAL EPTETLLSEK EINAREESLV bmy_08981T0/1-527 TSLFVELAEE EAGAAASEAA ELEQEGVPPL EPPVEPPAA- ---------- ENSBTAP00000018555/1-279 --------EK EGGF------ ---------- ---------- ---------- BACU007539/1-411 TSLFVELAEE EAGAAASEAA ELEQEGVKS- ---------- ---------- ENSTTRP00000015099/1-448 TSLFVELAEE EAGAARSGAA ELEQEGVPPL EPPVEPPAA- ---------- 501 550 ENSP00000318883/1-485 EELSPASEKK PVPPSEGKSR LSPAGEMKPM PLSEGKSILL FGG-AAAVAI bmy_08981T0/1-527 ---PPGGEQA ARGRGGLGAG PSPGGPEKAG PPPEGKSLLL FGG-AAAVAI ENSBTAP00000018555/1-279 ---------- ---------- ---------- ---------- ---------- BACU007539/1-411 ---------- ---------- ---------- -----ASFYL TCS-LAEVCV ENSTTRP00000015099/1-448 ---PPGGGQA VRGWGGLGAG PSPGGPER-L PPPEGKSLLL LGGAAAAVAI 551 600 ENSP00000318883/1-485 LAVAIGVAL- --ALRKK-- bmy_08981T0/1-527 LAVAVGLAL- --ALRRK-- ENSBTAP00000018555/1-279 ---------- --------- BACU007539/1-411 LWILMLSSLR SPVVKRSPW ENSTTRP00000015099/1-448 LAVAVGVAL- --ALRRK--