KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:01 2014 Check: 00 .. Name: ENSP00000354826/1-793 Len: 821 Check: 1755 Weight: 1.00 Name: ENSBTAP00000018566/1-535 Len: 821 Check: 1546 Weight: 1.00 Name: ENSTTRP00000002912/1-744 Len: 821 Check: 8037 Weight: 1.00 Name: bmy_10398T0/1-586 Len: 821 Check: 9876 Weight: 1.00 Name: BACU006773/1-739 Len: 821 Check: 2725 Weight: 1.00 // 1 50 ENSP00000354826/1-793 MDDFERRREL RRQKREEMRL EAERIAYQRN DDDEEEAARE RRRRARQERL ENSBTAP00000018566/1-535 MDDFERRREL RRQKREEMRL EAERIAYQRN DDDEEEAARE RRRRARQERL ENSTTRP00000002912/1-744 ---------- ---------- ----IAYQRN DDDEEEAARE RRRRARQERL bmy_10398T0/1-586 ---------- ---------- ---------- ---------- ---------- BACU006773/1-739 ---------M SHFAASSTGL PAVRIAYQRN DDDEEEAARE RRRRARQERL 51 100 ENSP00000354826/1-793 RQKQEEESLG QVTDQVEVNA QNSVPDEEAK TTTTNTQVEG DDEAAFLERL ENSBTAP00000018566/1-535 RQKQEEEALG QVTDQVEVNT QNSVPDEEVK TTTTNTQAEG DDEAALLERL ENSTTRP00000002912/1-744 RQKQEEESLG QVTDQVEVNT QNSVPDEEVK TTTTDTQVEA DDEAALLERL bmy_10398T0/1-586 ---------- ---------- ---------- ---------- ---------- BACU006773/1-739 RQKQEEESLG QVTDQVEVNT QNSVPDEEVK TTTPDTQVEA DDEAALLERL 101 150 ENSP00000354826/1-793 ARREERRQKR LQEALERQKE FDPTITDASL SLPSRRMQND TAENETTEKE ENSBTAP00000018566/1-535 ARREERRQKR LQEALERQKE FDPTITDASL SLSSRRMQND TTDNETAEKE ENSTTRP00000002912/1-744 ARREERRQKR LQEALERQKD SDPTIADASL LLPSRRMQNN TAENEMAEKE bmy_10398T0/1-586 ---------- ---------- ---------- ------MQNN TAENEMAEKE BACU006773/1-739 ARREERRQKR LQEALERQKD SDPTIADASL LLPSRRMQNN AAENEMAEKE 151 200 ENSP00000354826/1-793 EKSESRQERY EIEETETVTK SYQKNDWRDA EENKKEDKEK EEEEEEK--P ENSBTAP00000018566/1-535 GRSESRQERQ ELEETEIVTK SHQKNDWMEA EEKKKEEKEK EEEEEEK--P ENSTTRP00000002912/1-744 EKSESRRERY EIEETETVTK SHQKNDWMDA EEKKEEEKEK EEEEEEEEKP bmy_10398T0/1-586 EKSESRQERY DIEETEIVTK SHQKNEWMDA EEKKEEEKEK EDEEEEK--P BACU006773/1-739 EKSESRRERY EIEETETVTK SHQKNEWMDA EEKKEEEKEK EDEEEEK--P 201 250 ENSP00000354826/1-793 KRGSIGENQV EVMVEEKTTE SQEETVVMSL KNGQISSEEP KQEEEREQGS ENSBTAP00000018566/1-535 KPGSIEENQ- ---------- ---------- ---------- ---------- ENSTTRP00000002912/1-744 KQGSIEENQV EVVAEEKAAE TQEET-VMSL KNGQIGTDEP KTEEEREKGS bmy_10398T0/1-586 KQGSIEENQV EVVAEEKAAE TQEET-VMSL KNGQIGTDEP KTEEEREKGS BACU006773/1-739 KQGSIEENQV EVVAEEKAAE TQEET-VMSL KNGQIGTDEP KTEEEREKGS 251 300 ENSP00000354826/1-793 DEISHHEKME EEDKERAEAE RARLEAEERE RIKAEQDKKI ADERARIEAE ENSBTAP00000018566/1-535 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002912/1-744 HEIPHNEKME QEARERAEAE RARLEAEERE RIKVEQEQKI AEEKARKEAE bmy_10398T0/1-586 DEIPHNEKME QEARERAEAE RARLEAEERE RIKAEQEQKI AEEKARKEAE BACU006773/1-739 DEIPHNEKME QEAMERAEAE RARLEAEERE RIKAEQERKI AEEKARKEAE 301 350 ENSP00000354826/1-793 EKAAAQERER REAEERERMR EEEKRAAEER QRIKEEEKRA AEERQRIKEE ENSBTAP00000018566/1-535 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002912/1-744 EKAAAQERER QEAKERERIK EEERRAAEER QR-------- ---------- bmy_10398T0/1-586 EKAAAQERER RE-------- ---------- ---------- ---------- BACU006773/1-739 EKAAAQERER RE-------- ---------- ---------- ---------- 351 400 ENSP00000354826/1-793 EKRAAEERQR IKEEEKRAAE ERQRARAEEE EKAKVEEQKR NKQLEEKKHA ENSBTAP00000018566/1-535 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002912/1-744 ----AKERER IKEEERRAAE ERQRAKAEEE ERAKIEEQKR KKQLEEKKRE bmy_10398T0/1-586 ----AKERER IKEEERRAAV ERQRAKAEEE ERAKIEEQKR KKQLEEKKRE BACU006773/1-739 ----AKERER IKEEERRAAE ERQRAKAEEE ERAKIEEQKR KKQLEEKKRE 401 450 ENSP00000354826/1-793 MQETKIKGEK VEQKIEGKWV NEKKAQEDKL QTAVLKKQGE EKGTKVQAKR ENSBTAP00000018566/1-535 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002912/1-744 MQEKKIKGEK VEEKTEGKWV NEKKVQEDKL QTAVQKKQEE ERGAKMQAKR bmy_10398T0/1-586 MQEKKIKGEK VEEKTEGKWV NEKKVQEDKL QTAVQKKQ-- ---------- BACU006773/1-739 MQEKKIKGEK VEEKTEGKWV NEKKVQEDKL QTAVQKKQ-- ---------- 451 500 ENSP00000354826/1-793 EKLQEDKPTF KKEEIKDEKI KKDKEPKEEV KSFMDRKKGF TEVKSQNGEF ENSBTAP00000018566/1-535 ---------- ----LKDEKT KKDKESK-DV KRFLDAKKGF TEVKSQNGEF ENSTTRP00000002912/1-744 GKSQEDKPTF KKEEIKDEKT KRDKESK-EV KSFLDGKKGF TEMKSQNGEF bmy_10398T0/1-586 ---------- ----IKDEKT KKDKESK-EV KSFLAGKKGF TEMKSQNGEF BACU006773/1-739 ---------- ----IKDEKT KKDKESK-EV KSFLDGKKGF TEMKSQNGEF 501 550 ENSP00000354826/1-793 MTHKLKHTEN TFSRPGGRAS VDTKEAEGAP QVEAGKRLEE LRRRRGETES ENSBTAP00000018566/1-535 MTHKLKHAEN TFSRAGGRVS -EAKEAEGTS QVEAGKRLEE LRRRRGETES ENSTTRP00000002912/1-744 MTHKLKHTEN TFSRPGGRAS -EAKEAEGAS QVEAGKRLEE LRRRRGETES bmy_10398T0/1-586 MTHKLKHAEN TISRPGGRAS -EAKEAEGAS QVEAGKRLEE LRRRRGETES BACU006773/1-739 MTHKLKHTEN TFSRPGGRAS -EAKEAEAAS QVEAGKRLEE LRRRRGETES 551 600 ENSP00000354826/1-793 EEFEKLKQKQ QEAALELEEL KKKREERRKV LEEEEQRRKQ EEADRKLREE ENSBTAP00000018566/1-535 EEFEKLKQKQ QEAALELEEL KKKREERRKV LEEEEQRKKQ EEAERKVREE ENSTTRP00000002912/1-744 EEFEKLKQKQ QEAALELEEL KKKREERRKV LEEEGQRRKQ EEAERRVREE bmy_10398T0/1-586 EEFEKLKQKQ QEAALELEEL KKKREERRKV LEEEEQRRRQ EEAERKVREE BACU006773/1-739 EEFEKLKQKQ QEAALELEEL KKKREERRKV LEEEEQRRRQ EEAERKVREE 601 650 ENSP00000354826/1-793 EEKRRLKEEI ERRRAEAAEK RQKMPEDGLS DDKKPFKCFT PKGSSLKIEE ENSBTAP00000018566/1-535 EEKRRLKEEI ERRRAEAAEK RQKMPEDGLS EDKKPFKCFT PKGSSLKIEE ENSTTRP00000002912/1-744 EEKRRLKEEI ERRRAEAAEK RQKMPEDGLS DDKKPFKCFT PKGSSLKIEE bmy_10398T0/1-586 EEKRRLKEEI ERRRAEAAEK RQKMPEDGLS DDKKPFKCFT PKGSSLKIEE BACU006773/1-739 EEKRRLKEEI ERRRAEAAEK RQKMPEDGLS DDKKPFKCFT PKGSSLKIEE 651 700 ENSP00000354826/1-793 RAEFLNKSVQ KSSGVKSTHQ AAIVSKIDSR LEQYTSAIEG TKSAKPTKPA ENSBTAP00000018566/1-535 RAEFLNKSVQ K-SGVKSTHQ AAVVSKIDSR LEQYTSAIEG TKAAKPTKPA ENSTTRP00000002912/1-744 RAEFLNKSVQ KSSGVKPTHQ AAVVSKIDSR LEQYTSAIEG TKTAKPTKPA bmy_10398T0/1-586 RAEFLNKSVQ KSSGVKSTHQ AAVVSKIDSR LEQYTSAIEG TKTAKPTKPA BACU006773/1-739 RAEFLNKSVQ KSSGVKSTHQ AAVVSKIDSR LEQYTSAIEG TKTAKPTKPA 701 750 ENSP00000354826/1-793 ASDLPVPAEG VRNIKSMWEK GNVFSSPTAA GTPNKETAGL KVGVSSRINE ENSBTAP00000018566/1-535 ASDLPVPAEG VRNIKSMWEK GNVFSSPTAS GTPNKETAGL KVGVSSRINE ENSTTRP00000002912/1-744 ASDLPVPAEC VRNIKSMWEK GNVFSSPTAS -TPN-ETAGL KVGVSSRINE bmy_10398T0/1-586 ASDLPVPAEG VRNIKSMWEK GNVFSSPTAS GTPNKETAGL KVGVSSRINE BACU006773/1-739 ASDLPVPAEG VRNIKSMWEK GNVFSSPTAS GTPNKETAGL KVGVSSRINE 751 800 ENSP00000354826/1-793 WLTKTPDGNK SPAPKPSDLR PGDVSSKRNL WEKQSVDKVT SPTKV----- ENSBTAP00000018566/1-535 WLTKTPEGSK SPAPKPSDLR PGDVSGKRNL WEKQSVDKVT SPTKV----- ENSTTRP00000002912/1-744 WLTKTPDGNK SPAPKPSDLR PGDVSGKRNL WEKQSVDKVT SPTKV----- bmy_10398T0/1-586 WLTKTPDGNK SPAPKPSDLR PGDVSGKRNL WEKQSVDKVT SPTKV----- BACU006773/1-739 WLTKTPDGNK SPAPKPSDLR PGDVSGKRNL WEKQSVDKVT SPTKVIYRRF 801 850 ENSP00000354826/1-793 ---------- ---------- - ENSBTAP00000018566/1-535 ---------- ---------- - ENSTTRP00000002912/1-744 ---------- ---------- - bmy_10398T0/1-586 ---------- ---------- - BACU006773/1-739 VFHRFFSCCI LQYAVPGSKK K