KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:06 2014 Check: 00 .. Name: ENSP00000369442/1-1012 Len: 1013 Check: 6387 Weight: 1.00 Name: ENSBTAP00000018586/1-1012 Len: 1013 Check: 5851 Weight: 1.00 Name: ENSTTRP00000011776/1-1009 Len: 1013 Check: 5989 Weight: 1.00 Name: bmy_15196T0/1-705 Len: 1013 Check: 3239 Weight: 1.00 Name: BACU015752/1-705 Len: 1013 Check: 3642 Weight: 1.00 // 1 50 ENSP00000369442/1-1012 MPASAPPRRP RP-PPPSLSL LLVLLGLGGR RLRAEPGDGA QTWARFSRPP ENSBTAP00000018586/1-1012 -PARAPARPL RAFPPPPPPL WLLLLALGGR PLRAEPGDGA QTWARFARPP ENSTTRP00000011776/1-1009 MPAHVPPRRP RL-RTP--PL LLLLLALGGR RLRAEPGDGA QTWARFARPP bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000369442/1-1012 APEAAGLFQG TFPDGFLWAV GSAAYQTEGG WQQHGKGASI WDTFTHHPLA ENSBTAP00000018586/1-1012 TPEAAGLLHD TFPDGFLWAV GSAAYQTEGG WQQHGKGASI WDTFTHRPPA ENSTTRP00000011776/1-1009 APGAAGLFHD TFPDGFHWAV GSAAYQTEGG WRQHGKGASI KDTFTHRPPA bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000369442/1-1012 PPGDSRNASL PLGAPSPLQP ATGDVASDSY NNVFRDTEAL RELGVTHYRF ENSBTAP00000018586/1-1012 PPGDPSAAGW PSGAPSPPPP ATGDVASDGY NNVFRDTEGL RELGVTHYRF ENSTTRP00000011776/1-1009 PPGDAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000369442/1-1012 SISWARVLPN GSAGVPNREG LRYYRRLLER LRELGVQPVV TLYHWDLPQR ENSBTAP00000018586/1-1012 SISWARVLPN GSASAPNREG LRYYRRLLER LRELGVQPVV TLYHWDLPQR ENSTTRP00000011776/1-1009 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000369442/1-1012 LQDAYGGWAN RALADHFRDY AELCFRHFGG QVKYWITIDN PYVVAWHGYA ENSBTAP00000018586/1-1012 LQDAYGGWAN RALADHFRDY AELCFRHFGG QVKYWITIDN PYVVAWHGYA ENSTTRP00000011776/1-1009 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000369442/1-1012 TGRLAPGIRG SPRLGYLVAH NLLLAHAKVW HLYNTSFRPT QGGQVSIALS ENSBTAP00000018586/1-1012 TGRLAPGVRG SPRLGYLVAH NLLLAHAKIW HLYDTSFRPT QGGQVSIALS ENSTTRP00000011776/1-1009 XXXXXXXXXX XXXXXXXXXX XXXXAHAKIW HLYNTSFRPT QGGQVSIALS bmy_15196T0/1-705 ---------- ---------- ---------- ---------- ---------- BACU015752/1-705 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000369442/1-1012 SHWINPRRMT DHSIKECQKS LDFVLGWFAK PVFIDGDYPE SMKNNLSSIL ENSBTAP00000018586/1-1012 SHWISPRRMT EHSIQECQKS LDFVLGWFAK PIFIDGDYPE SMKNNLSSLL ENSTTRP00000011776/1-1009 SHWISPRRMT EHSIKECQKS LDFVLGWFAK PVFIDGDYPE SMKNNLSSLL bmy_15196T0/1-705 --------MT EHSIKECQKS LDFVLGWFAK PIFIDGDYPE SMKNNLSSLL BACU015752/1-705 --------MT EHSIKECQKS LDFVLGWFAK PIFIDGDYPE SMKNNLSSLL 351 400 ENSP00000369442/1-1012 PDFTESEKKF IKGTADFFAL CFGPTLSFQL LDPHMKFRQL ESPNLRQLLS ENSBTAP00000018586/1-1012 PDFTESEKKF IKGTADFFAL SFGPTLSFQL LDPQMKFRQL ESPSLRQLLS ENSTTRP00000011776/1-1009 PDFTESEKKF IKGTADFFAL SFGPTLSFQL LDPQMKFRQL ESPSLRQLLS bmy_15196T0/1-705 PDFTESEKKF IRGTADFFAL SFGPTLSFQL LDPQMKFRQL ESPSLRQLLS BACU015752/1-705 PDFTESEKKF IKGTADFFAL SFGPTLSFQL LDPQMKFRQL ESPSLRQLLS 401 450 ENSP00000369442/1-1012 WIDLEFNHPQ IFIVENGWFV SGTTKRDDAK YMYYLKKFIM ETLKAIKLDG ENSBTAP00000018586/1-1012 WIDLEYNHPQ IFIVENGWFV SGTTKRDDAK YMYYLKKFIM ETLKAIRLDG ENSTTRP00000011776/1-1009 WIDLEYNHPQ IFIVENGWFV SGTTKRDDAK YMYYLKKFIM ETLKAIRLDG bmy_15196T0/1-705 WIDLEYNHPQ IFIVENGWFV SGTTKRDDAK YMYYLKKFIM ETLKAIRLDG BACU015752/1-705 WIDLEYNHPQ IFIVENGWFV SGTTKRDDAK YMYYLKKFIM ETLKAIRLDG 451 500 ENSP00000369442/1-1012 VDVIGYTAWS LMDGFEWHRG YSIRRGLFYV DFLSQDKMLL PKSSALFYQK ENSBTAP00000018586/1-1012 VDVIGYTAWS LMDGFEWHRG YSIRRGLFYV DFLSQDKKLL PKSSALFYQK ENSTTRP00000011776/1-1009 VDVIGYTAWS LMDGFEWHRG YSIRRGLFYV DFLSQDKRLL PKSSALFYQK bmy_15196T0/1-705 VDVIGYTAWS LMDGFEWHRG YSIRRGLFYV DFLSQDKKLL PKSSALFYQK BACU015752/1-705 VDVIGYTAWS LMDGFEWHRG YSIRRGLFYV DFLSQDKKLL PKSSALFYQK 501 550 ENSP00000369442/1-1012 LIEKNGFPPL PENQPLEGTF PCDFAWGVVD NYIQVDTTLS QFTDLNVYLW ENSBTAP00000018586/1-1012 LIENNGFPPL PENQPLEGTF PCDFAWGVVD NCIQVDTTLS QFIDPNVYLW ENSTTRP00000011776/1-1009 LIEKNGFPPL PENPPLEGTF PCDFAWGIVD NYIQVDTTLS QFTDPNVYLW bmy_15196T0/1-705 LIEKNGFPPL PENQPLEGTF PCDFAWGIVD NYIQVDTTLS QFTDPNVYLW BACU015752/1-705 LIEKNGFPPL PENQPLEGTF SCDFAWGIVD NYIQVDTTLS QFTDPSVYLW 551 600 ENSP00000369442/1-1012 DVHHSKRLIK VDGVVTKKRK SYCVDFAAIQ PQIALLQEMH VTHFRFSLDW ENSBTAP00000018586/1-1012 DVHRSKRLIK VDGVLTKTRK SYCVDFAAIR PQIALLQEMH VTHFHFSLDW ENSTTRP00000011776/1-1009 DVHHSKRLIK VDGVVTKKRK -YCVDFAAIR PQIALLREMH VSHFHFSLDW bmy_15196T0/1-705 DVHHSKRLIK VDGVVTKKRK SYCVDFAAIR PQIALLQEMH VSHFHFSLDW BACU015752/1-705 DVHHSKRLIK VDGVVTKKRK SYCVDFAAIR PQIALLQEMH VSHFHFSLDW 601 650 ENSP00000369442/1-1012 ALILPLGNQS QVNHTILQYY RCMASELVRV NITPVVALWQ PMAPNQGLPR ENSBTAP00000018586/1-1012 ALILPLGNRS QVNRTVLGFY RCVASELVRA NITPVVALWR PAAPHQGLPA ENSTTRP00000011776/1-1009 ALILPLGNQS QVNRTVLRYY RCMASELVRA NITPVVALWR PAAPHQGLPP bmy_15196T0/1-705 ALILPLGNQS QVNRTVLRYY RCVASELVRA NITPVVALWR PAAPHQGLPP BACU015752/1-705 ALILPLGNQS QVNRTVLRYY RCVASELVRA NITPVVALWR PAAPHQGLPP 651 700 ENSP00000369442/1-1012 LLARQGAWEN PYTALAFAEY ARLCFQELGH HVKLWITMNE PYTRNMTYSA ENSBTAP00000018586/1-1012 PLARHGAWEN PHTALAFAEY ASLCFQDLGR HVKFWITMHE PSTRNMTYSA ENSTTRP00000011776/1-1009 PLARHGAWEN PHTALAFAEY ASLCFRDLGH HVKFWITMNE PSTRNMTYIA bmy_15196T0/1-705 PLARHGAWEN PHTALAFAEY ASLCFRDLGH HVKFWITMDE PSTRNMTYSA BACU015752/1-705 PLARHGAWEN PHTALAFAEY ASLCFRDLGH HVKFWITMNE PSTRNMTYSA 701 750 ENSP00000369442/1-1012 GHNLLKAHAL AWHVYNEKFR HAQNGKISIA LQADWIEPAC PFSQKDKEVA ENSBTAP00000018586/1-1012 GHNLLKAHAL AWRTYDERFR RSQKGKISIA LQADWIEPAC PFSPEDREVA ENSTTRP00000011776/1-1009 GHHLLKAHAL AWRVYDEKFR RSQKGRISIA LQADWIEPAC PLSPEDQEVA bmy_15196T0/1-705 GHHLLKAHAL AWRVYDEKFR RSQKGKISIA LQADWIEPAC PLSPKDKEVA BACU015752/1-705 GHHLLKAHAL AWRVYDEKFR RSQKGKISIA LQADWIEPAC PLSPKDQEVA 751 800 ENSP00000369442/1-1012 ERVLEFDIGW LAEPIFGSGD YPWVMRDWLN QRNNFLLPYF TEDEKKLIQG ENSBTAP00000018586/1-1012 ERVLEFDIGW LAEPIFGSGD YPRVMRDWLN QRNNFLLPYF TDEEKKLIRG ENSTTRP00000011776/1-1009 ERVLQFDIGW LAEPIFGSGD YPRVMRDWLN QRNNFLLPYF TDEEKKLIRG bmy_15196T0/1-705 ERVLQFDIGW LAEPIFGSGD YPRVMRAWLN QRNNFLLPYF TDEEKKLIRG BACU015752/1-705 ERVLQFDIGW LAEPIFGSGD YPRVMRAWLN QRNNFLLPYF TDEEKKLIQG 801 850 ENSP00000369442/1-1012 TFDFLALSHY TTILVDSEKE DPIKYNDYLE VQEMTDITWL NSPSQVAVVP ENSBTAP00000018586/1-1012 SFDFLALSHY TTILVDWEKE DPIKYNDYLA VQEMTDITWL NSPSQVAVVP ENSTTRP00000011776/1-1009 SFDFLALSHY TTILVDWEKE DPVKYNDYLA VQEMTDITWL NSPSQVAVVP bmy_15196T0/1-705 SFDFLALSHY TTILVDWEKE DSVKYNDYLA VQEMTDITWL NSPSQVAVVP BACU015752/1-705 SFDFLALSHY TTILVDWEKE DPVKYNDYLA VQEMTDITWL NSPSQVAVVP 851 900 ENSP00000369442/1-1012 WGLRKVLNWL KFKYGDLPMY IISNGIDDGL HAEDDQLRVY YMQNYINEAL ENSBTAP00000018586/1-1012 WGLRKVLNWL KAKYGDLPMY IISNGIDDDP HAAQDNLRVY YMQTYVNEAL ENSTTRP00000011776/1-1009 WGLRKVLNWL KSKYGDLPMY IISNGIDDDP HAAEDNLRVY YMKNYINEAL bmy_15196T0/1-705 WGLRKVLNWL KSKYGDLPMY IISNGIDDDP HAAEDNLRVY YMKNYVNEAL BACU015752/1-705 WGLRKVLNWL KSKYGDLPMY IISNGIDDDP HAAEDNLRVY YMKNYVNEAL 901 950 ENSP00000369442/1-1012 KAHILDGINL CGYFAYSFND RTAPRFGLYR YAADQFEPKA SMKHYRKIID ENSBTAP00000018586/1-1012 KAYILDGINL CGYFAYSFND RTAPKFGLYR YAANQFEPKP SMKHYRKIID ENSTTRP00000011776/1-1009 KAYVLDGINL CGYFAYSFND HTAPKFGLYR YAANQFEPKP SMKHYRKIID bmy_15196T0/1-705 KAYILDGINL CGYFAYSFND RTAPKFGLYR YAANQFEPKP SMKHYRKIID BACU015752/1-705 KAYILDGINL CGYFAYSFND RTAPKFGLYR YAANQFEPKP SMKHYRKIID 951 1000 ENSP00000369442/1-1012 SNGFPGPETL ERFCPEEFTV CTECSFFHTR KSLLAFIAFL FFASIISLSL ENSBTAP00000018586/1-1012 NNGFPGPETL GRFCPEEFTL CTECSFFHTR KSLLAFIAFL LFAFVISLSL ENSTTRP00000011776/1-1009 NNGFPGPKTL GRFCPEEFTL CTECSFFHTR KSLLAFIAFL FFAFIISLSL bmy_15196T0/1-705 NNGFPGPKTL GRFCPEEFTL CTECSFFHTR KSLLAFIAFL FFAFIISLSL BACU015752/1-705 NNGFPGPKTL GRFCPEEFTL CTECSFFHTR KSLLAFIAFL FFAFIISLSL 1001 1050 ENSP00000369442/1-1012 IFYYSKKGRR SYK ENSBTAP00000018586/1-1012 IFYYSKKGRR GYK ENSTTRP00000011776/1-1009 IFYYSKRGRR SYK bmy_15196T0/1-705 IFYYSKRGRR SYK BACU015752/1-705 IFYYSKRGRR SYK