KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:07 2014 Check: 00 .. Name: BACU002142/1-306 Len: 495 Check: 6625 Weight: 1.00 Name: ENSTTRP00000012254/1-492 Len: 495 Check: 4294 Weight: 1.00 Name: ENSP00000326570/1-495 Len: 495 Check: 3357 Weight: 1.00 Name: ENSBTAP00000018591/1-495 Len: 495 Check: 7691 Weight: 1.00 Name: bmy_06591T0/1-256 Len: 495 Check: 8376 Weight: 1.00 // 1 50 BACU002142/1-306 MRLTRCQAAL AAAITLNLLV LFYVSWLQHQ PRFSPARGSR HGSASGPRVT ENSTTRP00000012254/1-492 MRLTRCQAAL AAAITLNLLV LFYVSWLQHQ PRYSPARGSR RGSASGPRVT ENSP00000326570/1-495 MRLTRCQAAL AAAITLNLLV LFYVSWLQHQ PRNSRARGPR RASAAGPRVT ENSBTAP00000018591/1-495 MRLTRCQAAL AAAITLNLLV LFYVSWLHHQ PRSSRTRGSR RGSTSGPRVT bmy_06591T0/1-256 MRLTRCQAAL AAAITLNLLV LFYVSWLQHQ PRYSPARGSR RGSASGPRVT 51 100 BACU002142/1-306 ILVREFEAFD NAVPELVDSF LQQDPAQPVV VAADTLPYPP LALPRIPSVR ENSTTRP00000012254/1-492 ILVREFEAFD NAVPELVDSF LQQDPAQPVV VAADTLPYPP LALPRIPSVR ENSP00000326570/1-495 VLVREFEAFD NAVPELVDSF LQQDPAQPVV VAADTLPYPP LALPRIPNVR ENSBTAP00000018591/1-495 ILVREFEAFD NAVPELVDSF LQQEPTQPVV VVADTLPYPP LALPRIPNVR bmy_06591T0/1-256 IL-------- ---------- ---------- ---------- ---------- 101 150 BACU002142/1-306 LALLQPALDR PAAASRPETY VATEYVALVP DGARA----- ---------- ENSTTRP00000012254/1-492 LALLQPALDR PAAASRPETY VATEYVALVP DGARAEAPGQ LKRMFEVLRA ENSP00000326570/1-495 LALLQPALDR PAAASRPETY VATEFVALVP DGARAEAPGL LERMVEALRA ENSBTAP00000018591/1-495 LALLQPALDR PASASRPETY VATEYVALVP DGARAEAPGQ LERMVEVLRA bmy_06591T0/1-256 ---------- ---------- ---------- ---------- ---------- 151 200 BACU002142/1-306 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012254/1-492 GGARLVAAPV ASANPARCLA LNVSLREWTA RYGPAPSAPR CDALDGDAVV ENSP00000326570/1-495 GSARLVAAPV ATANPARCLA LNVSLREWTA RYGAAPAAPR CDALDGDAVV ENSBTAP00000018591/1-495 GGARLVAAPI ASANPARCLA LNVSLREWTA RYGPAPSAPR CDALDGDAVV bmy_06591T0/1-256 ---------- ---------- ---------- ---------- ---------- 201 250 BACU002142/1-306 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012254/1-492 LLRARDLFNL SAPLARPVGT GLFLQTALRG WTVQLLDLPF ARARQPPLTT ENSP00000326570/1-495 LLRARDLFNL SAPLARPVGT SLFLQTALRG WAVQLLDLTF AAARQPPLAT ENSBTAP00000018591/1-495 LLRARDLFNL SAPLARPVGT GLFLQTALRG WTVQMLDLPF GVARQPPLAT bmy_06591T0/1-256 ---------- ---------- ---------- ---------- ---------- 251 300 BACU002142/1-306 ---------- ---------- ---------- ---------- ----XXXXXX ENSTTRP00000012254/1-492 AHARWKAERE GRARRAALLR ALGIRLVSWE GGRLEWFGCN KETPRCFGTV ENSP00000326570/1-495 AHARWKAERE GRARRAALLR ALGIRLVSWE GGRLEWFGCN KETTRCFGTV ENSBTAP00000018591/1-495 AHARWKAERE GRARRAALLR ALGVRLVSWE GGRLEWFGCN KETPRCFGTV bmy_06591T0/1-256 ---------- ---------- ---------- ---------- -ETPRCFGTV 301 350 BACU002142/1-306 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000012254/1-492 VGDTPVCLRA LRETARCCLR ALRETTRYVV GVL-AAGVRY WLE-GSLLG- ENSP00000326570/1-495 VGDTPAYLYE ERWTPPCCLR ALRETARYVV GVLEAAGVRY WLEGGSLLGA ENSBTAP00000018591/1-495 VGDTPAYLYE ERWTPPCCLR ALRETARYVV GVLEAAGVRY WLEGGSLLGA bmy_06591T0/1-256 VGDTPAYLYE ERWTPPCCLR ALRETARYVV GVLEAAGVRY WLEGGSLLGA 351 400 BACU002142/1-306 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000012254/1-492 TRHGDIIPWD YDVDLGIYLE DVGNCEQLRG AEAGSVVDER GFVWEKAVEG ENSP00000326570/1-495 ARHGDIIPWD YDVDLGIYLE DVGNCEQLRG AEAGSVVDER GFVWEKAVEG ENSBTAP00000018591/1-495 ARHGDIIPWD YDVDLGIYLE DVGNCEQLRG AEAGSVVDER GFVWEKAVEG bmy_06591T0/1-256 ARHGDIIPWD YDVDLGIYLE DVGNCEQLRG AEAGSVVDER GFVWEKAVEG 401 450 BACU002142/1-306 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000012254/1-492 DFFRVQYSES NHLHVDLWPF YPRNGVMTKD TWLDHRQDVE FPEHFLQPLV ENSP00000326570/1-495 DFFRVQYSES NHLHVDLWPF YPRNGVMTKD TWLDHRQDVE FPEHFLQPLV ENSBTAP00000018591/1-495 DFFRVQYSES NHLHVDLWPF YPRNGVMTKD TWLDHRQDVE FPEHFLQPLV bmy_06591T0/1-256 DFFRVQYSES NHLHVDLWPF YPRNGVMTKD TWLDHRQDVE FPEHFLQPLV 451 500 BACU002142/1-306 XXXXXXXXXX XXXXW----- ---------- ---------- ----- ENSTTRP00000012254/1-492 PLPFAGFVAQ APNNYRRFLE LKFGPGVIEN PEYPNPALLS LAGSS ENSP00000326570/1-495 PLPFAGFVAQ APNNYRRFLE LKFGPGVIEN PQYPNPALLS LTGSG ENSBTAP00000018591/1-495 PLPFAGFVAQ APNNYRRFLE LKFGPGVIEN PEYPNPALLS LGGSS bmy_06591T0/1-256 PLPFAGFVAQ APNNYRRFLE LKFGPGVIES PEYPNPALLS LAGSS