KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:08 2014 Check: 00 .. Name: ENSP00000344285/1-233 Len: 290 Check: 3759 Weight: 1.00 Name: ENSBTAP00000018597/1-232 Len: 290 Check: 4674 Weight: 1.00 Name: BACU017369/1-232 Len: 290 Check: 5670 Weight: 1.00 Name: bmy_10902T0/1-289 Len: 290 Check: 4472 Weight: 1.00 Name: ENSTTRP00000010556/1-197 Len: 290 Check: 7833 Weight: 1.00 // 1 50 ENSP00000344285/1-233 MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVAPDH FASSLASRVP ENSBTAP00000018597/1-232 MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVAPDH FTSTLASRVP BACU017369/1-232 MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVASDH FTSSLASRVP bmy_10902T0/1-289 MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVASDH FTSSLASRVP ENSTTRP00000010556/1-197 MNLNFTSPLH PASSQRPTSF FIEDILLHKP KPLREVASDH FTSSLASRVP 51 100 ENSP00000344285/1-233 LLDYGYPLMP TPTLLAPHAH HPLHKGDHHH PYFLTTSGMP VPALFPHPQH ENSBTAP00000018597/1-232 LLDYGYPLMP TPTLLAPHPH HPLHKGDHHH PYFLTTSGVP VPALFPHPQH BACU017369/1-232 LLDYGYPLMP TPTLLAPHPH HPLHKGDHHH PYFLTTSGVP VPALFPHSQH bmy_10902T0/1-289 LLDYGYPLMP TPTLLAPHPH HPLHKGDHHH PYFLTTSGVP VPALFPHPQH ENSTTRP00000010556/1-197 LLDYGYPLMP TPTLLAPHPH HPLHKGDHHH PYFLTTAGVP VPALFPHPQH 101 150 ENSP00000344285/1-233 AELPGKHCRR RKARTVFSDS QLSGLEKRFE IQRYLSTPER VELATALSLS ENSBTAP00000018597/1-232 PELPGKHCRR RKARTVFSDS QLSGLEKRFE IQRYLSTPER VELATALSLS BACU017369/1-232 PELPGKHCRR RKARTVFSDS QLSGMEKRFE IQRYLSTPER VELATALSLS bmy_10902T0/1-289 PELPGKHCRR RKARTVFSDS QLSGLEKRFE IQRYLSTPER VELATALSLS ENSTTRP00000010556/1-197 PELPGKHCRR RKARTVFSDS QLSGLEKRFE IQRYLSTPER VELATALSLS 151 200 ENSP00000344285/1-233 ET-------- ---------- ---------- ---------- ---------- ENSBTAP00000018597/1-232 ET-------- ---------- ---------- ---------- ---------- BACU017369/1-232 ET-------- ---------- ---------- ---------- ---------- bmy_10902T0/1-289 ETQVGRRRGR PHLRSLLSPP TPNASGPAAE FLSATTPLPF ILGFSEDPND ENSTTRP00000010556/1-197 ET-------- ---------- ---------- ---------- ---------- 201 250 ENSP00000344285/1-233 ---------Q VKTWFQNRRM KHKKQLRKSQ DEPKAPDGPE SPEGSPRGSE ENSBTAP00000018597/1-232 ---------Q VKTWFQNRRM KHKKQLRKSQ DEPKAPDGPE SPEGSPRGPE BACU017369/1-232 ---------Q VKTWFQNRRM KHKKQLRKSQ DEPKAPDGPE SPEGSPHGPK bmy_10902T0/1-289 VIFFVSPRNQ VKTWFQNRRM KHKKQLRKSQ DEPKAPDGPE SPEGSPHGPK ENSTTRP00000010556/1-197 ---------Q VKTWFQNRRM KHKKQLRKSQ DEPKAPDGPE SPEGSPHGPK 251 300 ENSP00000344285/1-233 AATAAEARLS LPAGPFVLTE PEDEVDIGDE GELGSGPHVL ENSBTAP00000018597/1-232 AA-PAEARLG LPAGSFVLTE PEDEVDIGDE AELGSGPHVL BACU017369/1-232 AA-PAEARLG LPTGPFVLTE PEDEVDIGDE GELGSGPHVL bmy_10902T0/1-289 AA-PAEARLG LPTGPFVLTE PEDEVDIGDE GELGSGPHVL ENSTTRP00000010556/1-197 AA-PA----- ---------- ---------- ----------