KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:08 2014 Check: 00 .. Name: bmy_05455T0/1-404 Len: 641 Check: 785 Weight: 1.00 Name: ENSBTAP00000018600/1-589 Len: 641 Check: 7898 Weight: 1.00 Name: ENSP00000422168/1-618 Len: 641 Check: 8667 Weight: 1.00 Name: BACU019985/1-526 Len: 641 Check: 4854 Weight: 1.00 Name: ENSTTRP00000012009/1-518 Len: 641 Check: 812 Weight: 1.00 // 1 50 bmy_05455T0/1-404 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018600/1-589 ---------- ---------- ---MSAVLCP VPAGRARGWR AFVI------ ENSP00000422168/1-618 MAGSGPRPRS WGRREAGARD EAAAAGGRGP GPCRCSQGRR AWIAPGKPAM BACU019985/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012009/1-518 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05455T0/1-404 ---------- ---------- ---------- MGGRGDRAEP HWTSLAKHPS ENSBTAP00000018600/1-589 -VSAVGFMAA EETHWPVPMK AIGAQNLLTM PGGVAKAGYL HKKGGTQLQL ENSP00000422168/1-618 PAAWTPFMAA EEMHWPVPMK AIGAQNLLTM PGGVAKAGYL HKKGGTQLQL BACU019985/1-526 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012009/1-518 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_05455T0/1-404 FLRPLRFVII HKRCIYYFKS STSASPQGAF SLSGYNRVMR AAEETTSSNV ENSBTAP00000018600/1-589 LKWPLRFVVI HKRCIYYFKS STSASPQGAF SLSGYNRVMR AAEETTSNNV ENSP00000422168/1-618 LKWPLRFVII HKRCVYYFKS STSASPQGAF SLSGYNRVMR AAEETTSNNV BACU019985/1-526 ---PLRFVII HKRCIYYFKS STSASPQGAF SLSGYNRVMR AAEETTSSNV ENSTTRP00000012009/1-518 ---PLRFVII HKRCIYYF-S STSASPXXXX SLSGYNRVMR AAEETTSSNV 151 200 bmy_05455T0/1-404 FPFKIVHISK KHRTWFFSAS SEDERKSWMA LLRREIGHFH EKKELPLDAS ENSBTAP00000018600/1-589 FPFKIIHVSK KHRTWFFSAS SEDERKSWMA LLRKEIGHFQ EKKELPLDAS ENSP00000422168/1-618 FPFKIIHISK KHRTWFFSAS SEEERKSWMA LLRREIGHFH EKKDLPLDTS BACU019985/1-526 FPFKIVHISK KHRTWFFSAS SEDERKSWMA LLRREIGHFH EKKELPPDAS ENSTTRP00000012009/1-518 FPFKIVHISK KHRTWFFSAS SEDERKSWMT LLRREIGHFH EKKELPLDAS 201 250 bmy_05455T0/1-404 DSSSDTDSFY GAIERPVDIS LSPYPTDNED YEHDDEDDSY MEPDCPESGK ENSBTAP00000018600/1-589 DSSSDTDSFY GAIERPVDIS LSPHPTDSED YEHDDEDDSY LEPDSPEPGR ENSP00000422168/1-618 DSSSDTDSFY GAVERPVDIS LSPYPTDNED YEHDDEDDSY LEPDSPEPGR BACU019985/1-526 DPSSDTDSFY GAIERPVDIS LSPYPTDNED YEHDDEDDSY MEPDCPEPGK ENSTTRP00000012009/1-518 DSSSDTDSFY GAIERPVDIS LSPYPTDNED YEHDDEDDSY MEPDCPESGK 251 300 bmy_05455T0/1-404 PEVLLPQLLW F--------- -LLISSWPGT PCSLASSPAT LSSAPSTPRG ENSBTAP00000018600/1-589 PEDPLIHPPA YPPPPVPTPR KPVFSEVPRA HSFTSKGPGP LLPPPPPKRG ENSP00000422168/1-618 LEDALMHPPA YPPPPVPTPR KPAFSDMPRA HSFTSKGPGP LLPPPPPKHG BACU019985/1-526 PEDALSHPPA YPPPPVPTPR KPVFSALPRS PSFLSKGPGP LLPPAPPKRS ENSTTRP00000012009/1-518 PEDALIHPPA YPPPPVPTPR KPVFSDVPRA HSFSSKGPGP LLPPAPPKRS 301 350 bmy_05455T0/1-404 LLLAVPPSRA PRASPLPSHW LPPS------ ----GAPAPT GLQPTRTCRP ENSBTAP00000018600/1-589 LPDTGPAPED SRREPPPLRW VEPGSRVPAV SRRMSDPPSN ILPPGPGLRK ENSP00000422168/1-618 LPDVGLAAED SKRDPLCPRR AEPCPRVPAT PRRMSDPPLS TMPTAPGLRK BACU019985/1-526 LPDAGPAPED SRRELPGPRR LEPGPRVPAP SRRVSDPPLG GLPAVPS-RK ENSTTRP00000012009/1-518 LPDAGPAPED SRRELLGPRW LEPGPRVPAP SRRVSEPPPG GLPAVPS-RK 351 400 bmy_05455T0/1-404 APS-PRQTLV RPLVFAPSLT RFALSSLGPV TAALVKPCLR LPQPWLERAH ENSBTAP00000018600/1-589 APCFPENSSP SLEPRIPAHG VSPSST---- ATAASRNCDK LKSFHLSPR- ENSP00000422168/1-618 PPCFRESASP SPEPWTPGHG ACSTSSAAIM ATATSRNCDK LKSFHLSPR- BACU019985/1-526 PPCFHEDTSP GPEPRVPGHG ASSPSSSASA AAATSRNCDK LRSFHLSPR- ENSTTRP00000012009/1-518 PPCFREDASS GPEPRVPGHG ASSSSSSASA AATTSRNCDK LKSFHLSPR- 401 450 bmy_05455T0/1-404 GGLTLIPTLD LQGPSAPAHL LAHSRLLSQN VSRQGSHPSA RGWHLAWGP- ENSBTAP00000018600/1-589 GTPAPEP--- ---PPVPANK PKFLKMVEES PPGEAARPGS RVPPVAPRPP ENSP00000422168/1-618 GPPTSEP--- ---PPVPANK PKFLKIAEED PPREAAMPGL FVPPVAPRPP BACU019985/1-526 GPPTPEP--- ---PPVPANK PKLLKMAEGA PPREAAKPGL FVPAAAPRPP ENSTTRP00000012009/1-518 GPPTPEP--- ---PPVPANK PKFLKVAEVA PPREAAKPGL FVPAVAPRPP 451 500 bmy_05455T0/1-404 ---LPAPTCL ASPRHLVLRV PSRPALCCPG CPRAQPQGSG LARSS----- ENSBTAP00000018600/1-589 PLKLPMPEAA DRPP--VLPR PEKPAL--PH LQRSPPDGQS FRSFSFEKPR ENSP00000422168/1-618 ALKLPVPEAM ARPA--VLPR PEKPQL--PH LQRSPPDGQS FRSFSFEKPR BACU019985/1-526 ALKLPTPEAT ARPA--ILPR TEKPPL--PH LQRSPPDGQS FRSFSFEKPW ENSTTRP00000012009/1-518 ALKLPTPEAT ARPA--ILPR PEKPPL--PH LQRSPPDGQS FRSFSFEKPR 501 550 bmy_05455T0/1-404 ---------- ---------- ---------- -PV------- ---------- ENSBTAP00000018600/1-589 KPVQTDTSQA DAGGEGSDDD YEKV------ -PLPSSVFIN TTESCEVERL ENSP00000422168/1-618 QPSQADT--- --GGDDSDED YEKV------ -PLPNSVFVN TTESCEVERL BACU019985/1-526 KPVQADTPQA DTGGEDSDED YEKARPSGAP RPQAGSVFIN TTESCEVERL ENSTTRP00000012009/1-518 KPAQADTPQA DAGGEDSDED YEKV------ -PLPSSVFIN TTESCEVERL 551 600 bmy_05455T0/1-404 ----TPGPQP VSSTGC---- ---------- ---------- ---------- ENSBTAP00000018600/1-589 FKATSPRGVP QDGLYCIRNS STKSGKVLVV WDETSSKVRN YRIFEKDSKF ENSP00000422168/1-618 FKATSPRGEP QDGLYCIRNS STKSGKVLVV WDETSNKVRN YRIFEKDSKF BACU019985/1-526 FKATSPRGEP LDGLYCIRNS STKSGKVLVV WDETSSKVRN YRIFEKEAKS ENSTTRP00000012009/1-518 FKATSPRGEP LDGLYCIRNS STKAGKVLVV WDETSSKVRN YRIFEKGAKF 601 650 bmy_05455T0/1-404 ---------- ---------- ---------- ---------- - ENSBTAP00000018600/1-589 YLEGEVLFVG VGSLVEHYHT HVLPGHQSLL LQHPYGYARP R ENSP00000422168/1-618 YLEGEVLFVS VGSMVEHYHT HVLPSHQSLL LRHPYGYTGP R BACU019985/1-526 YLEGEVLFVS VGSLVEHYHT HVLPGHRSLL LRHPYGYARP R ENSTTRP00000012009/1-518 YLEGEVLFVS VGSLVEHYHT HVLPGHQSLL LRHPYGYARP R