KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:08 2014 Check: 00 .. Name: bmy_08540T0/1-263 Len: 410 Check: 1267 Weight: 1.00 Name: BACU012853/1-201 Len: 410 Check: 1022 Weight: 1.00 Name: ENSP00000263733/1-409 Len: 410 Check: 4327 Weight: 1.00 Name: ENSTTRP00000016467/1-409 Len: 410 Check: 4546 Weight: 1.00 Name: ENSBTAP00000018604/1-409 Len: 410 Check: 5341 Weight: 1.00 // 1 50 bmy_08540T0/1-263 ---------- --------ME KSLNVERSDL S--------- FRKLI----- BACU012853/1-201 MKLKQRVVLL AILLVIFIFT KVFLIDNLDT SAANREDQRA FHRMMAGLRV ENSP00000263733/1-409 MKLKQRVVLL AILLVIFIFT KVFLIDNLDT SAANREDQRA FHRMMTGLRV ENSTTRP00000016467/1-409 MKLKQRVVLL AILLVIFIFT KVFLIDNLDT SAANREDQRA FHRMMAGLRV ENSBTAP00000018604/1-409 MKLKQRVVLL AILLVIFIFT KVFLIDNLDT SAANREDQRA FHRMMAGLRV 51 100 bmy_08540T0/1-263 ---------- -----VAALW ---------- ---------- ---------R BACU012853/1-201 ELVSKLDHTL QSPWEIAAQW VVPREVYPEE TPELGAIMHA MATKKIIKAD ENSP00000263733/1-409 ELAPKLDHTL QSPWEIAAQW VVPREVYPEE TPELGAVMHA MATKKIIKAD ENSTTRP00000016467/1-409 ELVSKLDHTL QSPWEIAAQW VVPREVYPEE TPELGAIMHA MATKKIIKAD ENSBTAP00000018604/1-409 ELVPKLDHTL QSPWEIAAQW VVPREVYPEE TPELGAILHA MATKKIIKAD 101 150 bmy_08540T0/1-263 MNWEGQAEMR AL----GG-- ---------- ---------- ---------- BACU012853/1-201 VGYKG-TQLK ALLILEGGQK VVFKPKRYNR DYVVEGEPYA GYDRHNAEVA ENSP00000263733/1-409 VGYKG-TQLK ALLILEGGQK VVFKPKRYSR DHVVEGEPYA GYDRHNAEVA ENSTTRP00000016467/1-409 VGYKG-TQLK ALLILEGGQK VVFKPKRYNR DYVVEGEPYA GYDRHNAEVA ENSBTAP00000018604/1-409 VGYKG-TQLK ALLILEGGQK VVFKPKRYNR DYVVEGEPYA GYDRHNAEVA 151 200 bmy_08540T0/1-263 ---------- ---------- ---------- -----CCSKC TCRNNTCFYG BACU012853/1-201 AFHLDRILGF RRAPLVVGRF VNLRTEIKPV ATEQLLSTFL TI-------- ENSP00000263733/1-409 AFHLDRILGF HRAPLVVGRF VNLRTEIKPV ATEQLLSTFL TVGNNTCFYG ENSTTRP00000016467/1-409 AFHLDRILGF RRAPLVVGRF VNLRTEIKPV ATEQLLSTFL TVGNNTCFYG ENSBTAP00000018604/1-409 AFHLDRILGF RRAPLVVGRF VNLRTEIKPV ATEQLLSTFL TVGNNTCFYG 201 250 bmy_08540T0/1-263 KCYYCRETEP ACADGDTMEG SVTLWLPDVW PLQKHRHPWG RTYREGKLAR BACU012853/1-201 ---------- ---------- ---------- ---VHRLP-- ---------- ENSP00000263733/1-409 KCYYCRETEP ACADGDIMEG SVTLWLPDVW PLQKHRHPWG RTYREGKLAR ENSTTRP00000016467/1-409 KCYYCRETEP ACADGDTMEG SVTLWLPDVW PLQKHRHPWG RTYREGKLAR ENSBTAP00000018604/1-409 KCYYCRETEP ACADGDTMEG SVTLWLPDVW PLQKHRHPWG RTYREGKLAR 251 300 bmy_08540T0/1-263 WEYDESYCDA VKKTSPYDSG PRLLDIIDTA VFDYLIGNAD RHHYESFQDD BACU012853/1-201 ---------- ---------- -------ELT LF-------- ---------- ENSP00000263733/1-409 WEYDESYCDA VKKTSPYDSG PRLLDIIDTA VFDYLIGNAD RHHYESFQDD ENSTTRP00000016467/1-409 WEYDESYCDA VKKTSPYDSG PRLLDIIDTA VFDYLIGNAD RHHYESFQDD ENSBTAP00000018604/1-409 WEYDESYCDA VKKTSPYDSG PRLLDIIDTA VFDYLIGNAD RHHYESFQDD 301 350 bmy_08540T0/1-263 EGASMLILLD NAKSFGNPSL DERSILAPLY QCCIIRVSTW NRLNSLKNGV BACU012853/1-201 ---------- ---------- ---------- ---------- ---------- ENSP00000263733/1-409 EGASMLILLD NAKSFGNPSL DERSILAPLY QCCIIRVSTW NRLNYLKNGV ENSTTRP00000016467/1-409 EGASMLILLD NAKSFGNPSL DERSILAPLY QCCIIRVSTW NRLNSLKNGV ENSBTAP00000018604/1-409 EGASMLILLD NAKSFGNPSL DERSILAPLY QCCIIRVSTW NRLNSLKNGV 351 400 bmy_08540T0/1-263 LKSALKSAMA HDPISPVLSD PHLDAVDQRL LSVLATVKQC TDQFGMDAVL BACU012853/1-201 ---------- ---------- ---------- ---------- ---------- ENSP00000263733/1-409 LKSALKSAMA HDPISPVLSD PHLDAVDQRL LSVLATVKQC TDQFGMDTVL ENSTTRP00000016467/1-409 LKSALRSAMA HDPISPVLSD PHLDAVDQRL LSVLATVKQC TDQFGMDAVL ENSBTAP00000018604/1-409 LKSALKSAMA HDPISPVLSD PHLDAVEQRL LSVLATVKQC TDQFGMDTVL 401 450 bmy_08540T0/1-263 VEDRMPLSHL BACU012853/1-201 ---------- ENSP00000263733/1-409 VEDRMPLSHL ENSTTRP00000016467/1-409 VEDRMPLSHL ENSBTAP00000018604/1-409 VEDRMPLSHL