KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:09 2014 Check: 00 .. Name: ENSP00000383449/1-466 Len: 553 Check: 4230 Weight: 1.00 Name: ENSBTAP00000018616/1-465 Len: 553 Check: 9616 Weight: 1.00 Name: ENSTTRP00000015803/1-496 Len: 553 Check: 4695 Weight: 1.00 Name: bmy_03988T0/1-375 Len: 553 Check: 8318 Weight: 1.00 Name: BACU014677/1-288 Len: 553 Check: 4510 Weight: 1.00 // 1 50 ENSP00000383449/1-466 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018616/1-465 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015803/1-496 ---------- ---------- ---------- ---------- ---------- bmy_03988T0/1-375 MACLDLAWAA MGPVLGQSLS AIAGQAGQVV RPAALRQLLE TRRRDLLEIL BACU014677/1-288 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000383449/1-466 ---------- ---------- ---------- -------MKP PLLVFIVCLL ENSBTAP00000018616/1-465 ---------- ---------- ---------- -------MKP PILVFIVYLL ENSTTRP00000015803/1-496 ------RSGL TADFQLVAQT SSGGSTCPHM SDSHNGNMKL PLLVFIVYLL bmy_03988T0/1-375 FCNVLLLLCM IVSMLLKELG GTSARVTLSP KRDHSGNMKL PLLVFIVYLL BACU014677/1-288 ---------- ---------- ---------- -------MKL PLLVFIVYLL 101 150 ENSP00000383449/1-466 WLKDSHCAPT WKDKTAISEN LKSFSEVGEI DADEEVKKAL TGIKQMKIMM ENSBTAP00000018616/1-465 QLRDCQCAPT GKDRTSIRED PKGFSKAGEI DVDEEVKKAL IGMKQMKILM ENSTTRP00000015803/1-496 WLKDCHCAPT WKDKTAIHGG LKGFSKAGEI DIDEEVKKAL TGMKQMKILM bmy_03988T0/1-375 WLKDCHCAPT WKDKTAIHGD LKGFSKAGEI DIDEEVKKAL TGMKQMKILM BACU014677/1-288 WLKDCHCAPT WKDKTAIHGD LKGFSKAEEI DIDEEVKKAL TGMKQMKILM 151 200 ENSP00000383449/1-466 ERKEKEHTNL MSTLKKCREE KQEALKLLNE VQEHLEEEER LCRESLADSW ENSBTAP00000018616/1-465 ERREEEHSKL MRTLKKCREE KQEALKLMNE VQEHLEEEER LCQVSLMGSW ENSTTRP00000015803/1-496 ERREEEHSNL MRTLKKCREE KQEALKLMNE VQEHLEEEER LCQVSLTGSW bmy_03988T0/1-375 ERREEEHSNL MRTLKKCREE KQEALKLMNE VQEHLEEEER LCQXSLTDSW BACU014677/1-288 ERREEEHSKL MRTLKKCKEE KQEALKLTDE VQEHLEEEER LCQVSLTGSW 201 250 ENSP00000383449/1-466 GECRSCLENN CMRIYTTCQP SWSSVKNKIE RFFRKIYQFL FPFHEDNEKD ENSBTAP00000018616/1-465 DECKSCLESD CMRFYTTCQS SWSSMKSTIE RVFRKIYQFL FPFHEDDEKE ENSTTRP00000015803/1-496 DECKSCLESN CMRFYTTCPN SWSSMKTKLE HFFGKIYQFL FPFHEDNEKD bmy_03988T0/1-375 DECKSCLESN CMRFYTTCQN SWSSMKNKLE HFFRKIYQFL FPFHEDNEKD BACU014677/1-288 DECKSCLESN CMRFYTTCQN SWSSVKNKLE HFFRKIYQFL FPFHEDNEKD 251 300 ENSP00000383449/1-466 LPISEKLIEE DAQLTQMEDV FSQLTVDVNS LFNRSFNVFR QMQQEFDQTF ENSBTAP00000018616/1-465 LPVGEKFTEE DVQLMQIENV FSQLTVDVGF LYNMSFHVFK QMQQEFDLAF ENSTTRP00000015803/1-496 LPIGEKFVEE DAQLTQIENM FSQLTVDVGF LYNRSFDVFK QMQQEFDQAF bmy_03988T0/1-375 LPIGEKFVEE DAQLTQIENM FSQLXVDVGF LYNRSFDVFK QMQQEFDQAF BACU014677/1-288 LPIGEKFVEE DAQLTQIENM FSQLTVDVGF LYNRSFDVFK QMQQEFDQAF 301 350 ENSP00000383449/1-466 QSHFISDTDL TEPYFFPAFS KEPMTKADLE QCWDIPNFFQ LFCNFSVSIY ENSBTAP00000018616/1-465 QSYFMSDTDS MEPYFFPAFS KEPAKKAHPM QSWDIPSFFQ LFCNFSLSVY ENSTTRP00000015803/1-496 QSYFMSDTDF MEPYFFPAFS KEPAKKAHPV QSWDIPSFFQ LFCNFSLSIY bmy_03988T0/1-375 QSYFMSDTDF MEPYFFPXFS KEPAKKAHPV QSWDIPSFFQ LFCNFSLSIY BACU014677/1-288 QSYFMSDTDF MEPYFFPAFS KEPAKKAHPV QSWDIPSFFQ LFCNFSLSIY 351 400 ENSP00000383449/1-466 ESVSETITKM LKAIEDLPKQ DKAPDHGGLI SKMLPGQDRG LCGELDQNLS ENSBTAP00000018616/1-465 QSVSATVTEM LKAIEDLSKQ DKDSAHGGPS STTWPVRGRG LCGEPGQNSS ENSTTRP00000015803/1-496 QSVSATVTEM LKAIEDLSKQ DKDSAHGGLS RTALPVRGRG LCGELRQNSS bmy_03988T0/1-375 QSVSATVTEM LKAIEDLSKQ DK-------- ---------- ---------- BACU014677/1-288 QSVSATVTEM LKAIEDLSKQ DK-------- ---------- ---------- 401 450 ENSP00000383449/1-466 RCFKFHEKCQ KCQAHLSEDC PDVPALHTEL DEAIRLVNVS NQQYGQILQM ENSBTAP00000018616/1-465 ECLQFHARCQ KCQDYLWADC PAVPELYTKA DEALELVNIS NQQYAQVLQM ENSTTRP00000015803/1-496 ECFQFHARCQ KCQDYLQEDC PDVPKLYTKV DEALELVNIS NQQYAQVLQM bmy_03988T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU014677/1-288 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000383449/1-466 TRKHLEDTAY LVEKMRGQFG WVSELANQAP ETEIIFNSIQ VVPRIHEGNI ENSBTAP00000018616/1-465 TQHHLEDTTY LMEKMREQFG WVTELASQTP GSENIFSFIK VVPGVHEGNF ENSTTRP00000015803/1-496 TQHHLEDTTY LMEKMREQFG WVTELANQTL GTKNIFNFIK VVAGVHEGNF bmy_03988T0/1-375 ---------- ---------- ---------- ---------- -------GKY BACU014677/1-288 ---------- ---------- ---------- ---------- -------GKY 501 550 ENSP00000383449/1-466 SKQDETMMTD LSILPSSNFT LKIPLEESAE SSNFIGYVVA KALQHFKEHF ENSBTAP00000018616/1-465 SKQDEK-MID ISILPSSNFT LTIPLEESAE SSDFISYMLA KAVQHFKEHF ENSTTRP00000015803/1-496 SKRDVT-MTE VSILLSPNFT LTIPHEESAE SSNFISYMLA KAVQHFKEHF bmy_03988T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU014677/1-288 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000383449/1-466 KTW ENSBTAP00000018616/1-465 KSW ENSTTRP00000015803/1-496 KSW bmy_03988T0/1-375 --- BACU014677/1-288 ---