KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:10 2014 Check: 00 .. Name: BACU011601/1-242 Len: 277 Check: 9655 Weight: 1.00 Name: ENSP00000317468/1-201 Len: 277 Check: 1538 Weight: 1.00 Name: ENSBTAP00000018623/1-201 Len: 277 Check: 1450 Weight: 1.00 Name: bmy_02276T0/1-213 Len: 277 Check: 7988 Weight: 1.00 Name: ENSTTRP00000000522/1-202 Len: 277 Check: 4097 Weight: 1.00 // 1 50 BACU011601/1-242 MPVLTLCFRT QEGPRIPGKD VFPAANMQTH VRTQAGGGDS SLRTWGRQRE ENSP00000317468/1-201 ---------- -------MGN LFGRKK-QSR VTEQD----- ---------- ENSBTAP00000018623/1-201 ---------- -------MGN LFGRKK-QSR VTEQD----- ---------- bmy_02276T0/1-213 ---------- -------MGN LFGRKKQQSR VTEQD----- ---------- ENSTTRP00000000522/1-202 ---------- -------MGN LFGRKKQQSR VTEQD----- ---------- 51 100 BACU011601/1-242 FGRRFSCTSS LEAHVPQKVA SASQPGAGED GVRPEQQLKQ QRDKLKQYQK ENSP00000317468/1-201 ---------- ---------- ---------- --KAILQLKQ QRDKLRQYQK ENSBTAP00000018623/1-201 ---------- ---------- ---------- --KAILQLKQ QRDKLKQYQK bmy_02276T0/1-213 ---------- ---------- ---------- --KAILQLKQ QRDKLKQYQK ENSTTRP00000000522/1-202 ---------- ---------- ---------- --KAILQLKQ QRDKLKQYQK 101 150 BACU011601/1-242 RITQQLERER EIARQLLRDG RKERAKLLLK KKRYREQLLD KTENQITSLE ENSP00000317468/1-201 RIAQQLERER ALARQLLRDG RKERAKLLLK KKRYQEQLLD RTENQISSLE ENSBTAP00000018623/1-201 RITQQLERER EIARQLLRDG RKERAKLLLK KKRYREQLLD KTENQITSLE bmy_02276T0/1-213 RITQQLERER EIARQLLRDG RKERAKLLLK KKRYREQLLD KTENQITSLE ENSTTRP00000000522/1-202 RITQQLERER EIARQLLRDG RKERAKLLLK KKRYREQLLD KTENQITSLE 151 200 BACU011601/1-242 TMVQSIEFTQ IEMKVIEGLQ FGNECLNKMH QVMSIEEVER VLDETQEAVE ENSP00000317468/1-201 AMVQSIEFTQ IEMKVMEGLQ FGNECLNKMH QVMSIEEVER ILDETQEAVE ENSBTAP00000018623/1-201 TMVQSIEFTQ IEMKVIEGLK IGNECLNKMH QVMSIEEVER ILDETQEAVD bmy_02276T0/1-213 TMVQSIEFTQ IEMKVIEGLQ FGNECLNKMH QVMSIEEVER ILDETQEAVE ENSTTRP00000000522/1-202 TMVQSIEFTQ IEMKVIEGLQ FGNECLNKMH QVMSIEEVER ILDETQEAVE 201 250 BACU011601/1-242 YQRQIDELLA GSFTQEDEDA ILEELDAIT- ---------- --QVTGPPAL ENSP00000317468/1-201 YQRQIDELLA GSFTQEDEDA ILEELSAIT- ---------- QEQIELPEVP ENSBTAP00000018623/1-201 YQRQIDELLA GSFTQEDEDA ILEELDAIT- ---------- QEQIELPAVP bmy_02276T0/1-213 YQRQIDELLA GSFTQEDEDA ILEELDAITX VTGPPALTQA QEQIELPEVP ENSTTRP00000000522/1-202 YQRQIDELLA GSFTQEDEDA ILEELDAIT- ---------- QEQIELPEVP 251 300 BACU011601/1-242 T--------- ---------Q AQV---- ENSP00000317468/1-201 SEPLPEKIPE NVPVKARPRQ AELVAAS ENSBTAP00000018623/1-201 SEPLPEKIPE KVPVKARPRQ AELVAAS bmy_02276T0/1-213 SEPLPEKIPE KVPVKARPRQ AEVVAAS ENSTTRP00000000522/1-202 SEPLPEKIPE KVPVKARPRQ AEVVAAS