KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:11 2014 Check: 00 .. Name: ENSP00000220597/1-432 Len: 444 Check: 4615 Weight: 1.00 Name: ENSBTAP00000018628/1-442 Len: 444 Check: 3653 Weight: 1.00 Name: BACU011180/1-278 Len: 444 Check: 3798 Weight: 1.00 Name: ENSTTRP00000005041/1-436 Len: 444 Check: 4036 Weight: 1.00 Name: bmy_09581T0/1-436 Len: 444 Check: 4803 Weight: 1.00 // 1 50 ENSP00000220597/1-432 --------MG PAGSLLGSGQ MQITLWGSLA AVAIFFVITF LIFLCSSCDR ENSBTAP00000018628/1-442 PVPLPAPTMG PEGSLLIEGQ TQIILLGSLA SVATFFLITF LILLCSSCNR BACU011180/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005041/1-436 --------MG PEGSLLSGGQ MQITLWGSLA AVATFFLITF LIFLCSSCDR bmy_09581T0/1-436 --------MG PEGSLLSGGQ MQITLWGSLA AVATFFLITF LIFLCSSCDR 51 100 ENSP00000220597/1-432 EKKPRQHSGD HENLMNVPSD KEMFSRSVTS LATDAPASSE QNGALTNGDI ENSBTAP00000018628/1-442 EKKPRPHSGD HENLMNVPSD KEMFSRSVTS LATDAPPSSE QNGALTNGDI BACU011180/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005041/1-436 EKKPRQHSGD HENLMNVPSD KEMFSRSVTS LATDAPASSE QNGALTNGDI bmy_09581T0/1-436 EKKPRQHSGD HENLMNVPSD KEMFSRSVTS LATDAPASSE QNGALTNGDI 101 150 ENSP00000220597/1-432 LSEDSTLTCM QHYEEVQTSA SDLLDSQDST GKPKCHQSRE LPRIPPESAV ENSBTAP00000018628/1-442 LSEDSTVTCM QHYEEVQTSA SDLLDSQDST GKPKCHQSRE LPRIPPESSV BACU011180/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005041/1-436 LSEDSTMTCT QHYEEVQTSA SDLLDSQDST GKPKCHQSRE LPRIPPESEV bmy_09581T0/1-436 LSEDSTMTCM QHYEEVQTSA SDLLDSQDST GKPKCHQSRE LPRIPPESEV 151 200 ENSP00000220597/1-432 DTMLTARSVD GDQGLGMEGP YEVLKDSSSQ ENMVEDCLYE TVKEIKEVAA ENSBTAP00000018628/1-442 DTMHNGRSAD GDQALGMEGP YEVLKDSSSQ ENMVEDCLYE TVNEIKEVTA BACU011180/1-278 ---------- ------MEGP YEVLKDSASQ ENMVEDCLYE TVKEIKEVTA ENSTTRP00000005041/1-436 DTTLNGESAD GDQGLGMEGP YEVLKDSASQ ENMVEDCLYE TVKEIKEVTA bmy_09581T0/1-436 DTTLNGESTD GDQGLGMEGP YEVLKDSASQ ENMVEDCLYE TVKEIKEVTA 201 250 ENSP00000220597/1-432 AAHLEKGHSG KAKSTSASKE LPGPQTEGKA EFAEYASVDR NKKCRQSVNV ENSBTAP00000018628/1-442 AAQPSRGHSC RSKSASGVKE LPGPQANSRT DFAEYASVDR NKKCRQSVNA BACU011180/1-278 AAHSSRGHSS RSKSTSTVKE LPGPQASGKT DFAEYASVDR NKKCRQSANA ENSTTRP00000005041/1-436 AAHSAGGHSS RSKSTSTVKE LPGPQTSGKT DFAEYASVDR NRKCRQSANA bmy_09581T0/1-436 ATHSARGHSS RSKSTSTVKE LLGPQTSGKT DFAEYASVDR NKKCRQSANA 251 300 ENSP00000220597/1-432 ESILGNSCDP EEEAPPPVPV KLLDENENLQ EK-EGGEAEE SATDTTSETN ENSBTAP00000018628/1-442 EILLGNSCDP EEEAPPPVPV KLLDENENLQ KE-ESQAGEE GAAEGTSETN BACU011180/1-278 ESILGDPCDP EEEAPPPVPI KLLDENENLQ EQAESKAGEE GAAEGTSETN ENSTTRP00000005041/1-436 ESILGNSWDP EEEAPPPVPI KLLDENENLQ EQAESKTGEE GAAEGTSEAN bmy_09581T0/1-436 ESILGNPCDP EEEAPPPVPI KLLDENENLQ EQAESKAGEE GAAEGTSETN 301 350 ENSP00000220597/1-432 KRFSSLSYKS REEDPTLTEE EISAMYSSVN KPGQLVNKSG QSLTVPESTY ENSBTAP00000018628/1-442 KRLSSLSYKS REEDPTLTEE EISAMYSSVH KKGQPGNKSG QSLRVPEASY BACU011180/1-278 KRFSSLSYKS REEDPTLTEE EISAMYSSVH KKGQPGNKSG QSLKAPESTY ENSTTRP00000005041/1-436 KRFSSLSYKS REEDPTLTEE EISAMYSSVH KKGQPGNKSG QSLKAPESTY bmy_09581T0/1-436 KRFSSLSYKS REEDPTLTEE EISAMYSSVH KKGQPGNKSG QSLKVPESTY 351 400 ENSP00000220597/1-432 TSIQGDPQRS PSSCNDLYAT VKDFEKTPNS --TLPPAGRP S-EEPEPDYE ENSBTAP00000018628/1-442 TSMPGAAPRS PSSCNDLYAT VKDFEKMPHS VSTLPAAGKP S-EEPEPDYE BACU011180/1-278 TSIQGAAPRS PSSCNDLYAT LKDFEKIPNS VITPPAAGRP SGEEPEPDYE ENSTTRP00000005041/1-436 TSIQGAALRS PSSCNDLYAT LKDLEKIPNS VSTLPAAGRP NGEEPEPDYE bmy_09581T0/1-436 TSIQGAAPRS PSSCNDLYAT LKDFEKIPNS VSTLPAAGRP SGEEPEPDYE 401 450 ENSP00000220597/1-432 AIQTLNREEE KATLGTNGHH GLVPKENDYE SISDLQQGRD ITRL ENSBTAP00000018628/1-442 AIQTLNREEE KSAPETNSHH GLCPKENDYE SIGDLQQCRD VTRL BACU011180/1-278 AIQTLNREEE KAAPETNSHH GLFPKESDYE SIGDLQQCRD ITRL ENSTTRP00000005041/1-436 AIQTLNREEE KAAPETNSHH GLFPKENDYE SIGDLQQCRD ITRL bmy_09581T0/1-436 AIQTLNREEE KAAPETNSHH GLFPKENDYE SIGDLQQCRD ITRL