KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:11 2014 Check: 00 .. Name: ENSP00000212015/1-747 Len: 842 Check: 1693 Weight: 1.00 Name: ENSBTAP00000018630/1-734 Len: 842 Check: 5750 Weight: 1.00 Name: bmy_04396T0/1-729 Len: 842 Check: 8715 Weight: 1.00 Name: BACU001957/1-629 Len: 842 Check: 2480 Weight: 1.00 Name: ENSTTRP00000015416/1-616 Len: 842 Check: 1745 Weight: 1.00 // 1 50 ENSP00000212015/1-747 MADEAALALQ PGGSPSAAGA DREAASSPAG EPLRKRPRRD GPGLERSPGE ENSBTAP00000018630/1-734 MADEAALALQ PGGSPSVVAA EREAPSPPAG EPLRKRPRRD GPGVGRSSGE bmy_04396T0/1-729 ---------- ---------- ---------- ---------- ---------- BACU001957/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015416/1-616 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000212015/1-747 PGGAAPEREV PAAARGCPGA AAAALWREAE AEAAAAGGEQ EAQATAAAGE ENSBTAP00000018630/1-734 PGGTAPEREL PAAAGSCP-A AAAALWREAQ AAAAAAAEEE ---------- bmy_04396T0/1-729 ---------- -------MVI FVRLFWIFII LA-------- ---------- BACU001957/1-629 ---------- ---------M LSPVLLITPH LT-------- ---------- ENSTTRP00000015416/1-616 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000212015/1-747 GDNGPGLQGP SREPPLADNL YDEDDDDEGE EEEEAAAAAI GYRDNLLFGD ENSBTAP00000018630/1-734 -DNGPGLQGL SREAPPADDF YDDDDEG--- EEKEEAAAAI GYRDNLLFGD bmy_04396T0/1-729 ---------- ------ADCF RNLE------ ------FLLV SFADNLLFGD BACU001957/1-629 ---------- ---------L Y--------- -----THFMK PREDNLLFGD ENSTTRP00000015416/1-616 ---------- ---------- ---------- ---EDTASSI KNRDNLLFGD 151 200 ENSP00000212015/1-747 EIITNGFHSC ESDEEDRASH ASSSDWTPRP RI------GP YTFVQQHLMI ENSBTAP00000018630/1-734 EIITNGFHSC ESDEDDRASH ASSSDWTPRP RI------GP YTFVQQHLMI bmy_04396T0/1-729 EIITNGFHSC ESDEDDRASH ASSSDWTPRP RIVWAFGTGP YTFVQQHLMI BACU001957/1-629 EIITNGFHSC ESDEDDRASH ASSSDWTPRP RI------GP YTFVQQHLMI ENSTTRP00000015416/1-616 EIITNGFHSC ESDEDDRASH ASSSDWTPRP RI------GP YTFVQQHLMI 201 250 ENSP00000212015/1-747 GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE ENSBTAP00000018630/1-734 GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE bmy_04396T0/1-729 GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE BACU001957/1-629 GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE ENSTTRP00000015416/1-616 GTDPRTILKD LLPETIPPPE LDDMTLWQIV INILSEPPKR KKRKDINTIE 251 300 ENSP00000212015/1-747 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA VDFPDLPDPQ ENSBTAP00000018630/1-734 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA IDFPDLPDPQ bmy_04396T0/1-729 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA VDFPDLPDPQ BACU001957/1-629 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA VDFPDLPDPQ ENSTTRP00000015416/1-616 DAVKLLQECK KIIVLTGAGV SVSCGIPDFR SRDGIYARLA VDFPDLPDPQ 301 350 ENSP00000212015/1-747 AMFDIEYFRK DPRPFFKFAK ---------- ---------- ---------- ENSBTAP00000018630/1-734 AMFDIEYFRK DPRPFFKFAK ---------- ---------- ---------- bmy_04396T0/1-729 AMFDIEYFRK DPRPFFKFAK YILNCLTLGE NVVTENTNSK GEDEAHKSSF BACU001957/1-629 AMFDIEYFRK DPRPFFKFAK ---------- ---------- ---------- ENSTTRP00000015416/1-616 AMFDIEYFRK DPRPFFKFAK ---------- ---------- ---------- 351 400 ENSP00000212015/1-747 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018630/1-734 ---------- ---------- ---------- ---------- ---------- bmy_04396T0/1-729 QEDGVLVFVL PSLVLELFPE GRFASIYKRC LWVDFILSKR PCSLIAEFYT BACU001957/1-629 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015416/1-616 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000212015/1-747 -------EIY PGQFQPSLCH KFIALSDKEG KLLRNYTQNI DTLEQVAGIQ ENSBTAP00000018630/1-734 -------EIY PGQFQPSLCH KFIALSDKEG KLLRNYTQNI DTLEQVAGIQ bmy_04396T0/1-729 YDSNNPFEIY PGQFQPSLCH KFIALSDKEG KLLRNYTQNI DTLEQVAGIQ BACU001957/1-629 -------EIY PGQFQPSLCH KFIALSDKEG KLLRNYTQNI DTLEQVAGIQ ENSTTRP00000015416/1-616 -------EIY PGQFQPSLCH KFIALSDKEG KLLRNYTQNI DTLEQVAGIQ 451 500 ENSP00000212015/1-747 RIIQCHGSFA TASCLICKYK VDCEAVRGDI FNQVVPRCPR CPADEPLAIM ENSBTAP00000018630/1-734 KIIQCHGSFA TASCLICKYK VDCEAVRGDI FNQVVPRCPR CPADEPLAIM bmy_04396T0/1-729 RIIQCHGSFA TASCLICKYK VDCEAVRGDI FNQVVPRCPR CPADEPLAIM BACU001957/1-629 RIIQCHGSFA TASCLICKYK VDCEAVRGDI FNQVVPRCPR CPADEPLAIM ENSTTRP00000015416/1-616 RIIQCHGSFA TASCLICKYK VDCEAVRGDI FNQVVPRCPR CPADEPLAIM 501 550 ENSP00000212015/1-747 KPEIVFFGEN LPEQFHRAMK YDKDEVDLLI VIGSSLKVRP VALIPSSIPH ENSBTAP00000018630/1-734 KPEIVFFGEN LPEQFHRAMK YDKDEVDLLI VIGSSLKVRP VALIPSSIPH bmy_04396T0/1-729 KPEIVFFGEN LPEQFHRAMK YDKDEVDLLI VIGSSLKVRP VALIPSSIPH BACU001957/1-629 KPEIVFFGEN LPEQFHRAMK YDKDEVDLLI VIGSSLKVRP VALIPSSIPH ENSTTRP00000015416/1-616 KPEIVFFGEN LPEQFHRAMK YDKDEVDLLI VIGSSLKVRP VALIPSSIPH 551 600 ENSP00000212015/1-747 EVPQILINRE PLPHLHFDVE LLGDCDVIIN ELCHRLGGEY AKLCCNPVKL ENSBTAP00000018630/1-734 EVPQILINRE PLPHLHFDVE LLGDCDVIIN ELCHRLGGEY AKLCCNPVKL bmy_04396T0/1-729 EVPQILINRE PLPHLHFDVE LLGDCDVIIN ELCHRLGGEY AKLCCSPVKL BACU001957/1-629 EVPQILINRE PLPHLHFDVE LLGDCDVIIN ELCHRLGGEY AKLCCNPVKL ENSTTRP00000015416/1-616 EVPQILINRE PLPHLHFDVE LLGDCDVIIN ELCHRLGGEY AKLCCNPVKL 601 650 ENSP00000212015/1-747 SEITEKPPRT QKELAYLSEL PPTPLHVSED SSSPERTSPP DSSVIVTLLD ENSBTAP00000018630/1-734 SEITEKPPRI QKELAHLSEL PPTPLNISEG SSSPERTSPP DSSVIVTLLD bmy_04396T0/1-729 SEITEKPPRT QKELAHLSEL PPTPLNISEG SSSPEGTSPA DSSVIVTLLD BACU001957/1-629 SEITEKPPRT QKELAHLSEL PPTPLNISEG SSSPEGTSPA DSSVIVTLLD ENSTTRP00000015416/1-616 SEITEKPPRT QKELAHLSEL PPTPLNISEG SSSPEGTSPA DSSVIVTLLD 651 700 ENSP00000212015/1-747 QAAKSN-DDL DVSESKGCME EKPQEVQTS- RNVESIAEQM ENPDLKNVGS ENSBTAP00000018630/1-734 QETKSNVDDP DVSESKDHVT EKSQEVQTST RSIESVNEQL ESPDLKNAVS bmy_04396T0/1-729 QETKSNGDDP DVSESKNCVE EKSQEVQTSA RSIESVNEQL ESPDLKNVAS BACU001957/1-629 QETKSNGDDP DVSESKNCVE EKSQEVQTSA RSIESINEQL ESPDLKNVAS ENSTTRP00000015416/1-616 QETKSNVDDP DASESKNCVE EKLQEVQTSA RSIESVNEQL ESPDLKNVAS 701 750 ENSP00000212015/1-747 STGEKNERTS VAGTVRKCWP NRVAKEQISR RLDGNQYLFL PPNRYIFHGA ENSBTAP00000018630/1-734 NSGEKNERTS VAETVRKCWP ARLAKEQISK RLDDNQYLFL PPNRYIFHGA bmy_04396T0/1-729 NTGEKNERTS VAETVRKCWP ARLXKEQISK RLDGNQYLFL PPNRYIFHGA BACU001957/1-629 NTGEKNERTS VAETVRKCWP ARLAKEQISK RLDGNQYLFL PPNRYIFHGA ENSTTRP00000015416/1-616 NTGEKNERTS VAETVRKCWP ARLAKEQISK RLDGNQYLFL PPNRYIFHGA 751 800 ENSP00000212015/1-747 EVYSDSEDDV LSSSSCGSNS DSGTCQSPSL EEPMEDESEI EEFYNGLEDE ENSBTAP00000018630/1-734 EVYSDSEDDV LSSSSCGSNS DSGTCQSPSL EEPMEDESEN EEFYNGLEDD bmy_04396T0/1-729 EVYSDSEDDV LSSSSCGSNS DSGTCQSPSL EEPMEDESEI EEFYNGLEDD BACU001957/1-629 EVYSDSEDDV LSSSSCGSNS DSGTCQSPSL EEPMEDESEI EEFYNGLEDD ENSTTRP00000015416/1-616 EVYSDSEDDV LSSSSCGSNS DSGTCQSPSL EEPMEDESEI EEFYNGLEDD 801 850 ENSP00000212015/1-747 PDVPERAGGA GFGTDGDDQE AINEAISVKQ EVTDMNYPSN KS ENSBTAP00000018630/1-734 ADVNERAGGT VFEADGGDQE AINEAISVKQ EATCINYPSN KS bmy_04396T0/1-729 ADVNERAGGT GFGADGGBQE AVNEATSMKQ EATSINYPSN KS BACU001957/1-629 ADVNERAGGT GFGADGGDQE AVNEATSMKQ EATSINYPSN KS ENSTTRP00000015416/1-616 ADVNERTGGT GFGADGGDQE AVNEATSMKQ EATCINYPSN KS