KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:12 2014 Check: 00 .. Name: ENSP00000357882/1-348 Len: 487 Check: 9340 Weight: 1.00 Name: ENSTTRP00000012945/1-350 Len: 487 Check: 2353 Weight: 1.00 Name: BACU004723/1-242 Len: 487 Check: 3645 Weight: 1.00 Name: ENSBTAP00000018631/1-358 Len: 487 Check: 6845 Weight: 1.00 Name: bmy_14534T0/1-425 Len: 487 Check: 4603 Weight: 1.00 // 1 50 ENSP00000357882/1-348 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012945/1-350 ---------- ---------- ---------- ---------- ---------- BACU004723/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018631/1-358 ---------- ---------- ---------- ---------- ---------- bmy_14534T0/1-425 SQTAGGKDSK SLLRFSWASD FIVKTNKQKP EAQILMETSR FYETHPRGLP 51 100 ENSP00000357882/1-348 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012945/1-350 ---------- ---------- ---------- ---------- ---------- BACU004723/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018631/1-358 ---------- ---------- ---------- ---------- ---------- bmy_14534T0/1-425 RLEDSPHRKL STRGSGDQGD DLGYNRDHAW CLEPKARPFL HCANRRRNRA 101 150 ENSP00000357882/1-348 ---------- ---------- ------MKTA ENIRGTGSDG PRKRGLCVLC ENSTTRP00000012945/1-350 ---------- ---------- ------MKAG EDARGARSEK PKKLGLCVLC BACU004723/1-242 ---------- ---------- ------MKAG EDARGAHSEK PKKLGLCVLC ENSBTAP00000018631/1-358 ---------- ---------- ------MKMG EDVRGAHSER PQKLVLCVLC bmy_14534T0/1-425 VGDCACAVGG HFRKQRWQPP RVSRDSMKAG EDARGARSEK PKKLGLCVLC 151 200 ENSP00000357882/1-348 GLPAAGKSTF ARALAHRLQQ EQGWAIGVVA YDDVMPDAFL AGARARPAPS ENSTTRP00000012945/1-350 GLPAAGKSTF ARALSHRLRQ ESSWAVGVVA YDDVMPDAFL EEASARPLPS BACU004723/1-242 GLPAAGKSTF ARALSHSLRQ ERSWAVGVVA YDDVMPDAFL EEASARPL-- ENSBTAP00000018631/1-358 GLPAAGKSTF ARALRHWLQQ ELGWAVGVVA YDDVMPEAVL EKASASPLPS bmy_14534T0/1-425 GLPAAGKSTF ARALSHSLRQ ERSWAVGVVA YDDVMPDAFL EEASARPLPS 201 250 ENSP00000357882/1-348 QWKLLRQELL KYLEYFLMAV INGCQMSVPP NRTEAMWEDF ITCLKDQDLI ENSTTRP00000012945/1-350 QWKSLRQELL KYLEYFFLAV INGCQMSAPP SRTEAMWEDF LTCLKDQDLI BACU004723/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018631/1-358 QWKLFRQELL KFLEHFLLAV INGCQMSAPP SKTEAMWKDF ITCLKDQDLI bmy_14534T0/1-425 QWKSLRQELL KYLEYFFLAV INGCQMSAPP SRTEAMWEDF LTCLKDQDLI 251 300 ENSP00000357882/1-348 FSAAFEAQSC YLLTKTAVSR PLFLVLDDNF YYQSMRYEVY QLARKYSLGF ENSTTRP00000012945/1-350 SSSALEAQSH YLLTKTAVSR PLLLILDDNF YYQSMRYEVY QLARKYSLGF BACU004723/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018631/1-358 SSAAVEAQAL YPLTKTAVSR PLLLILDDNF YYQSMRYEVY QLARKYSSGF bmy_14534T0/1-425 SSSALEAQSH YLLTKTAVSR PLLLILDDNF YYQSMRYQVY QLARK----- 301 350 ENSP00000357882/1-348 CQLFLDCPLE TCLQRNGQRP QALPPETIHL MGRKLEKPNP EKNAWEHNSL ENSTTRP00000012945/1-350 CQLFLECSLE TCLQRNGQRP LPVPAETIHL MGSKIEKPNP EKNAWEHNSL BACU004723/1-242 ---------- ----RNGQRP LPVPAETIHL MGSKIEKPNP EKNAWEHNSL ENSBTAP00000018631/1-358 CQLFLDCALE TCLQRNAQRP RPLPAETIHQ MGNKIEKPNP EKNAWEHHSL bmy_14534T0/1-425 ------CGI- TCL------- ---------- ---------- ---------- 351 400 ENSP00000357882/1-348 TIPSPACASE ASLEVTDLLL TALENPVKYA EDNMEQKDTD RIICSTNILH ENSTTRP00000012945/1-350 TIQSPACTSE ARLKLTDLLL TALENPIKYV EENVEQKETD RIICSTNILH BACU004723/1-242 TIQSPACASE ARLKLTDLLL TALENPIKYV EENVEQKETD RIICSTNILH ENSBTAP00000018631/1-358 AVQSPACASE ARLKLTDLLI TALENPIKHV EENLEQKETD RLIGSTNILH bmy_14534T0/1-425 ---------- STLKLTDLLL TALENPIKYV EENVEQKETD RIICSTNILH 401 450 ENSP00000357882/1-348 KTDQTLRRIV SQTMKEAKGN QEAFSE---- MTFKQRWVRA NHAAIWRIIL ENSTTRP00000012945/1-350 QADQTLRRIV SQTMKEAKGN QEGFSEDMA- LKQRCEKGTA SHADACRIIL BACU004723/1-242 QADQTLRRIV SQTMKEAKGE QV-FPYNLKL LAEELNKLKA EFLEDLR--Q ENSBTAP00000018631/1-358 QADQTLRRIV SQTMKEAKDE QM-FPYNLKL LAEELNKLKA EFLEDLR--Q bmy_14534T0/1-425 QADQTLRRIV SQTMKEAKGE QV-FPYNLKL LAEELNKLKA EFLEDLR--Q 451 500 ENSP00000357882/1-348 GNEHIKCRSA KVGWLQCC-- ------RIEK RPLSTG- ENSTTRP00000012945/1-350 GSGHIKCKSP QVKL--VCS- ------RTEK KPLSLG- BACU004723/1-242 GNKKYLCFQQ TMGLSDVISF FHYEKDNIVR KYFSKQH ENSBTAP00000018631/1-358 GNKKYLCFQQ TIDLADVISF FHYEKDNIVR KYFSKQH bmy_14534T0/1-425 GNKKYLCFQQ TMDLSDVISF FHYEKDNIVR KYFSKQH