KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:12 2014 Check: 00 .. Name: ENSP00000413025/1-477 Len: 519 Check: 658 Weight: 1.00 Name: ENSBTAP00000018632/1-515 Len: 519 Check: 2575 Weight: 1.00 Name: ENSTTRP00000007040/1-519 Len: 519 Check: 2388 Weight: 1.00 Name: bmy_12108T0/1-436 Len: 519 Check: 6509 Weight: 1.00 Name: BACU019307/1-505 Len: 519 Check: 1881 Weight: 1.00 // 1 50 ENSP00000413025/1-477 MDADEGQDMS QVSGKESPPV SDTPDEGDEP MPIPEDLSTT SGGQQSSKSD ENSBTAP00000018632/1-515 ---MCRCEQD AQSGKESPPV SDTPDDSDEP MPVPEDLSTT SGGQQSSKSE ENSTTRP00000007040/1-519 MDADEGQDMS QVSGKESPPV SDTPDDGDEP MPVPEDLSTT SGGQQSSKGD bmy_12108T0/1-436 ---------- ---------- ---------- ---------- ---------- BACU019307/1-505 ---------- --SGKESPPV SDTPDDGDEP MPVPEDLSTT SGGQQSSKGD 51 100 ENSP00000413025/1-477 RVVASNVKVE TQSDEENGRA CEMNGEECAE DLRMLDASGE KMNGSHRDQG ENSBTAP00000018632/1-515 RGLAGNVKVE TQSDEENGRA CEVNGEECAE DLRMLDASGE KMNGSHSVQG ENSTTRP00000007040/1-519 RGLAGNVKVE TQSDEENGRA CEVNGEECAE DLRMLDASGE KMNGSHGVQG bmy_12108T0/1-436 ---------- ---------- ---------- ---MLDASGE KMNGSHGVQG BACU019307/1-505 RGLAGNVKVE TQSDEENGRA CEVNGEECAE DLRMLDASGE KMNGSHGVQG 101 150 ENSP00000413025/1-477 SSALSGVGGI RLPNGKLKCD ICGIICIGPN VLMVHKRSHT GERPFQCNQC ENSBTAP00000018632/1-515 SKALSGAGGI RLPNGKLKCD VCGIICIGPN VLMVHKRSHT -ERPFQCNQC ENSTTRP00000007040/1-519 SRALSGAGGI RLPNGKLKCD VCGIICIGPN VLTVHKRSHT GERPFQCNQC bmy_12108T0/1-436 SKALSGAGGI RLPNGKLKCD VCGIICIGPN VLMVHKRSHT GERPFQCNQC BACU019307/1-505 SKALSGAGGI RLPNGKLKCD VCGIICIGPN VLMVHKRSHT GERPFQCNQC 151 200 ENSP00000413025/1-477 GASFTQKGNL LRHIKLHSGE KPFKCHLCNY ACRRRDALTG HLRTHS---- ENSBTAP00000018632/1-515 GASFTQKGNL LRHIKLHSGE KPFKCHLCNY ACRRRDALTG HLRTHSVGKP ENSTTRP00000007040/1-519 GASFTQKGNL LRHIKLHSGE KPFKCHLCNY ACRRRDALTG HLRTHSVGKP bmy_12108T0/1-436 GASFTQKGNL LRHIKLHSGE KPFKCHLCNY ACRRRDALTG HLRTHSVGKP BACU019307/1-505 GASFTQKGNL LRHIKLHSGE KPFKCHLCNY ACRRRDALTG HLRTHSVGKP 201 250 ENSP00000413025/1-477 ---------- ---------- ---------- --------VI KEETNHSEMA ENSBTAP00000018632/1-515 HKCGYCGRSY KQRSSLEEHK ERCHNYLQSM GLPGTLYPVI KEETNHSEMA ENSTTRP00000007040/1-519 HKCGYCGRSY KQRSSLEEHK ERCHNYLQSM GLPGTLYPVI KEETNHSEMA bmy_12108T0/1-436 HKCGYCGRSY KQRSSLEEHK ERCHNYLQSM GLPGTLYPVI KEETNHSEMA BACU019307/1-505 HKCGYCGRSY KQRSSLEEHK ERCHNYLQSM GLPGTLYPVI KEETNHSEMA 251 300 ENSP00000413025/1-477 EDLCKIGSER SLVLDRLASN VAKRKSSMPQ KFLGDKGLSD TPYDSSASYE ENSBTAP00000018632/1-515 EDLCKMGSDR SLVLDRLASN VAKRKSSMPQ KFVGDKCLSE LPYDGSASYE ENSTTRP00000007040/1-519 EDLCKMGSER SLVLDRLASN VAKRKSSMPQ KFVGDKCLSD LPYDGSASYE bmy_12108T0/1-436 EDLCKMGSER SLVLDRLASN VAKRKSSMPQ KFVGDKCLSD LPYDGSASYE BACU019307/1-505 EDLCKMGSER SLVLDRLASN VAKRKSSMPQ KFVGDKCLSD LPYDGSAGYE 301 350 ENSP00000413025/1-477 KENEMMKSHV MDQAINNAIN YLGAESLRPL VQTPPGGSEV VPVISPMYQL ENSBTAP00000018632/1-515 KENEMMQTHV MDQAINNAIS YLGAESLRPL VQTPPGSSDV VPVLSPMYQL ENSTTRP00000007040/1-519 KENEMMQTHV MDQAINNAIS YLGAESLRPL VQTPPGSSDV VPVLSPMYHL bmy_12108T0/1-436 KENEMMQTHV MDQAINNAIS YLGAESLRPL VQTPPGSSDV VPALSPMYHL BACU019307/1-505 KENEMMQTHV MDQAINNAIS YLGAESLRPL VQTPPGSSEV VPVLSPMYHL 351 400 ENSP00000413025/1-477 HKPLAEGTPR SNHSAQDSAV ENLLLLSKAK LVPSEREASP SNSCQDSTDT ENSBTAP00000018632/1-515 HKPHGEGPAR SNHSAQDGAV ENLLLLSKAK SASSEREASP SNSCQDSTDT ENSTTRP00000007040/1-519 HKPHAEGPAR SNHSAQDGAV ENLLLLSKAK SASSEREASP SNSCQDSTDT bmy_12108T0/1-436 HKPHAEGPAR SNHSAQDGAV ENLLLLSKAK SASSEREASP SNSCQDSTDT BACU019307/1-505 HKPHAEGPAR SNHSAQDGAV ENLLLLSKAK SASSEREASP SNSCQDSTDT 401 450 ENSP00000413025/1-477 ESNNEEQRSG LIYLTNHIAP HARNGLSLKE EHRAYDLLRA ASENSQDALR ENSBTAP00000018632/1-515 ESNTEEQRGG LIYLTNHINP HARNGLSIKE EHAAYDVLRA ASEGPPDALR ENSTTRP00000007040/1-519 ESNTEEQRGG LIYLTNHFTP HARNGLSIKE EHAAYDVLRA ASEGPADALR bmy_12108T0/1-436 ESNTEEQRGG LIYLTNHFNP HARNGLSIKE EHAAYDVLRA ASEGPADALR BACU019307/1-505 ESNTEEQRGG LIYLTNHFNP HARNGLSIKE EHAAYDVLRA ASEGPADALR 451 500 ENSP00000413025/1-477 VVSTSGEQMK VYKCEHCRVL FLDHVMYTIH MGCHGFRDPF ECNMCGYHSQ ENSBTAP00000018632/1-515 VIGTSGEALK VYRCEHCRVL FLDHVMYTIH MGCHGFRDPF ECNMCGYHSQ ENSTTRP00000007040/1-519 VIGTSGEPLK VYRCEHCRVL FLDHVMYTIH MGCHGFRDPF ECNMCGYHSQ bmy_12108T0/1-436 VIGTSGEPLK VYRCEHCRVL FLDHVMYTIH MGCHGFRDPF ECNMCGYHSQ BACU019307/1-505 VIGTSGEPLK VYRCEHCRVL FLDHVMYTIH MGCHGFRDPF ECNMCGYHSQ 501 550 ENSP00000413025/1-477 DRYEFSSHIT RGEHRFHMS ENSBTAP00000018632/1-515 DRYEFSSHIT RGEHRFHMS ENSTTRP00000007040/1-519 DRYEFSSHIT RGEHRFHMS bmy_12108T0/1-436 DRYEFSSHIT RGEHRFHMS BACU019307/1-505 DRYEFSSHIT RGEHRFH--