KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:12 2014 Check: 00 .. Name: ENSP00000282369/1-728 Len: 739 Check: 8446 Weight: 1.00 Name: ENSBTAP00000018634/1-729 Len: 739 Check: 4363 Weight: 1.00 Name: bmy_22091T0/1-727 Len: 739 Check: 768 Weight: 1.00 Name: BACU014973/1-680 Len: 739 Check: 8814 Weight: 1.00 Name: ENSTTRP00000005838/1-728 Len: 739 Check: 1579 Weight: 1.00 // 1 50 ENSP00000282369/1-728 MSESGEMSEF GYIMELIAKG KVTIKNIERE LICPACKELF THPLILPCQH ENSBTAP00000018634/1-729 MSESGEVSEF GYIMELLARG KVTIKNIERE LICPACKELF THPLILPCQH bmy_22091T0/1-727 --MEGDGSD- ---------S LVTIKNIERE LICPACKELF THPLILPCQH BACU014973/1-680 MSESGEISEF GYIMELLARG KVTIKNIERE LICPACKELF THPLILPCQH ENSTTRP00000005838/1-728 MSESGDISEF GYIMELLARG KVTIKNIERE LICPACKELF THPLILPCQH 51 100 ENSP00000282369/1-728 SICHKCVKEL LLTLDDSFND VGSDNSNQSS PRLRLPSPSM DKIDRINRP- ENSBTAP00000018634/1-729 SICHKCVKEL LLMLDDSFND VGSDNSNQSS PRLRLPSPSV DKIDRISRP- bmy_22091T0/1-727 SICHKCVKEL LLMLDDSFND VGSDNSNQSS PRLRLPSPSM DKIDRISRPA BACU014973/1-680 SICHKCVKEL LLMLDDSFND VGSDNSNQSS PRLRLPSPSM DKIDRISRP- ENSTTRP00000005838/1-728 SICHKCVKEL LLMLDDSFND VGSDNSNQSS PRLRLPSPSM DKIDRISRP- 101 150 ENSP00000282369/1-728 ---------G WKRNSLTPRT TVFPCPGCEH DVDLGERGIN GLFRNFTLET ENSBTAP00000018634/1-729 ---------G WKRNSLTPRT TTFPCPGCEH DVDLGERGIN GLFRNFTLET bmy_22091T0/1-727 SQRRSLGWRG WKRNSLTPRT TTFPCPGCEH DVDLGERGIN GLFRNFTLET BACU014973/1-680 ---------G WKRNSLTPRT TTFPCPGCEH DVDLGERGIN GLFRNFTLET ENSTTRP00000005838/1-728 ---------G WKRNSLTPRT TTFPCPGCEH DVDLGERGIN GLFRNFTLET 151 200 ENSP00000282369/1-728 IVERYRQAAR AATAIMCDLC KPPPQESTKS CMDCSASYCN ECFKIHHPWG ENSBTAP00000018634/1-729 IVERYRQAAR AATAIMCDLC KPPPQESTKS CMDCSASYCN ECFKIYHPWG bmy_22091T0/1-727 IVERYRQAAR AATAIMCDLC KPPPQESTKS CMDCSASYCN ECFKIYHPWG BACU014973/1-680 IVERYRQAAR AATAIMCDLC KPPPQESTKS CMDCSASYCN ECFKIYHPWG ENSTTRP00000005838/1-728 IVERYRQAAR AATAIMCDLC KPPPQESTKS CMDCSASYCN ECFKIYHPWG 201 250 ENSP00000282369/1-728 TIKAQHEYVG PTTNFRPKIL MCPEHETERI NMYCELCRRP VCHLCKLGGN ENSBTAP00000018634/1-729 TVKAQHEYVG PTTNFRPKIL MCPEHETERI NMYCELCRRP VCHLCKLGGN bmy_22091T0/1-727 TVKAQHEYVG PTTNFRPKIL MCPEHETERI NMYCELCRRP VCHLCKLGGN BACU014973/1-680 TVKAQHEYVG PTTNFRP--- ---------- ---------- ---------- ENSTTRP00000005838/1-728 TVKAQHEYVG PTTNFRPKIL MCPEHETERI NMYCELCKRP VCHLCKLGGN 251 300 ENSP00000282369/1-728 HANHRVTTMS SAYKTLKEKL SKDIDYLIGK ESQVKSQISE LNLLMKETEC ENSBTAP00000018634/1-729 HSNHRVTTMS SAYKTLKEKL SKDIDYLIGK ESQVKSQISE LNLLMKETEC bmy_22091T0/1-727 HSNHRVTTMS SAYKTLKEKL SKDIDYLIGK ESQVKSQISE LNLLMKETEC BACU014973/1-680 ---------- ------KEKL SKDIDYLIGK ESQVKSQISE LNLLMKETEC ENSTTRP00000005838/1-728 HSNHRVTTMS SAYKTLKEKL SKDIDYLIGK ESQVKSQISE LNLLMKETEC 301 350 ENSP00000282369/1-728 NGERAKEEAI THFEKLFEVL EERKSSVLKA IDSSKKLRLD KFQTQMEEYQ ENSBTAP00000018634/1-729 NGERAKEDAI IHFEKLFEIL EDRKSSVLKA IDASKKLRLD KFQTQMEEYQ bmy_22091T0/1-727 NGERAKEEAI THFEKLFEIL GERKSSVLKA IDASKKLRLD KFQTQMEEYQ BACU014973/1-680 NGERAKEEAI THFEKLFEIL GERKSSVLKA IDASKKLRLD KFQTQMEEYQ ENSTTRP00000005838/1-728 NGERAKEDAI THFEKLFEIL EERKSSVLKA IDASKKLRLD KFQTQMEEYQ 351 400 ENSP00000282369/1-728 GLLENNGLVG YAQEVLKETD QSCFVQTAKQ LHLRIQKATE SLKSFRPAAQ ENSBTAP00000018634/1-729 GLLENNGLVG YAQEVLKETD QSCFVQTAKQ LHVRIQKATE SLKSFRPAAQ bmy_22091T0/1-727 GLLENNGLVG YAQEVLKETD QSCFVQTAKQ LHLRIQKATE SLKSFRPAAQ BACU014973/1-680 GLLENNGLVG YAQEVLKETD QSCFVQTAKQ LHLRIQKATE SLKSFRPAAQ ENSTTRP00000005838/1-728 GLLENNGLVG YAQEVLKETD QSCFVQTAKQ LHLRIQKATE SLKSFRPAAQ 401 450 ENSP00000282369/1-728 TSFEDYVVNT SKQTELLGEL SFFSSGIDVP EINEEQSKVY NNALINWHHP ENSBTAP00000018634/1-729 TSFEDYVVNT SKQTELLGEL SFFSSGVDVP EINEEQSKVY NNALINWHHP bmy_22091T0/1-727 TSFEDYVVNT SKQTELLGEL SFFSSGLDVP EINEEQSKIY NNALINWHHP BACU014973/1-680 TSFEDYVVNT SKQTELLGEL SFFSSGIDVP EINEQQSKVY NNAWINWHHP ENSTTRP00000005838/1-728 TSFEDYVVNT SKQTELLGEL SFFSSGVDVP EINEEQSKVY NNALINWHHP 451 500 ENSP00000282369/1-728 EKDKADSYVL EYRKINRDDE M-SWNEIEVC GTSKIIQDLE NSSTYAFRVR ENSBTAP00000018634/1-729 EKDKADSYVL EYRKINRDEE MLSWNEIEVS GTSKVISDLE SNCNYAFRVR bmy_22091T0/1-727 EKDKADSYVL EYRKINRDEE MLSWNEIEVC GTSKVISDLE SNCNYAFRVR BACU014973/1-680 EKDKADSYVL EYRKINRDEE MLSWNEIEVC GTSKVISDLE SNCNYAFRVR ENSTTRP00000005838/1-728 EKDKADSYVL EYRKINRDEE MLSWNEIEVC GTSKVISDLE SNCNYAFRVR 501 550 ENSP00000282369/1-728 AYKGSICSPC SRELILHTPP APVFSFLFDE KCGYNNEHLL LNLKRDRVES ENSBTAP00000018634/1-729 AYKGSICSPC SRELILHTPP APVFSFLFDE KCGYNNEHLL LNLKRDRVES bmy_22091T0/1-727 AYKGSICSPC SRELILHTPP APVFSFLFDE KCGYNNEHLL LNLKRDRVES BACU014973/1-680 AYKGSICSPC SRELILHTPP APVFSFLFDE KCGYNNEHLL LNLKRDRVES ENSTTRP00000005838/1-728 AYKGSICSPC SRELILHTPP APVFSFLFDE KCGYNNEHLL LNLKRDHVES 551 600 ENSP00000282369/1-728 RAGFNLLLAA ERIQVGYYTS LDYIIGDTGI TKGKHFWAFR VEPYSYLVKV ENSBTAP00000018634/1-729 RAGFNLLLAA ERIQVGYYTS LDYIIGDVGI TKGKHFWAFR VEPYSYLVKA bmy_22091T0/1-727 RAGFNLLLAA ERIQVGYFTS LDYIIGDVGI TKGKHFWAFR VEPYSYLVKV BACU014973/1-680 RAGFNLLLAA ERIQVGYFTS LDYIIGDVGI TKGKHFWAFR VEPYSYLVKV ENSTTRP00000005838/1-728 RAGFNLLLAA ERIQVGYYTS LDYIIGDVGI TKGKHFWAFR VEPYSYLVKV 601 650 ENSP00000282369/1-728 GVASSDKLQE WLRSPRDAVS PRYEQDSGHD SGSEDACFDS SQPFTLVTIG ENSBTAP00000018634/1-729 GVASSDKLQE WLRSPRDAVS PRYEQDSGHD SGSEDACVDS SQPFTLVTIG bmy_22091T0/1-727 GVASSDKLQE WLRSPRDAVS PRYEQDSGHD SGSEDTCFDS SQPFTLVTIG BACU014973/1-680 GVASSDKLQE WLRSPRDAVS PRYEQDSGHD SGSEDTCFDS SQPFTLVTIG ENSTTRP00000005838/1-728 GVASSDKLQE WLRTPRDTVS PRYEQDSGHD SGSEDTCFDS SQPFTLVTIG 651 700 ENSP00000282369/1-728 MQKFFIPKSP TSSNEPENRV LPMPTSIGIF LDCDKGKVDF YDMDQMKCLY ENSBTAP00000018634/1-729 MKKVFIPKSP TSSNEPENRV LPMPTSIGVF LDYDKGKVAF YDMDHMKCLY bmy_22091T0/1-727 MKKFFIPKSP TSSNEPENRV LPMPTSIGVF LDYDKGKVGF YDMDHMKCLY BACU014973/1-680 MKKFFIPKSP TSSNEPENRV LPMPTSIGVF LDYDKGKVGF YDMDHMKCLY ENSTTRP00000005838/1-728 MKKFFIPKSP T-SNEPENRV LPMPTSIGVF LDYDKGKVGF YDMDHMKCLY 701 750 ENSP00000282369/1-728 ERQVDCSHTL YPAFALMGSG GIQLEEPITA KYLEYQEDM ENSBTAP00000018634/1-729 ERQVDCSHTM YPAFALMGSG GIQLEESITA KYLEYQENM bmy_22091T0/1-727 ERQVDCSHTM YPAFALMGSG GIQLEEPITA KYLEYQETM BACU014973/1-680 ERQVDCSHTM YPAFALMGSG GIQLEEPITA TYLEYQETM ENSTTRP00000005838/1-728 ERQVDCSHTM YPAFALMGSG GIQLEEPITA KYLEYQETM