KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:15 2014 Check: 00 .. Name: ENSTTRP00000003086/1-480 Len: 584 Check: 3086 Weight: 1.00 Name: ENSBTAP00000018647/1-403 Len: 584 Check: 4385 Weight: 1.00 Name: ENSP00000286353/1-480 Len: 584 Check: 8050 Weight: 1.00 Name: bmy_17672T0/1-457 Len: 584 Check: 8050 Weight: 1.00 Name: BACU012759/1-584 Len: 584 Check: 7174 Weight: 1.00 // 1 50 ENSTTRP00000003086/1-480 MLFRNRFVLL LALAALLAFV SLSLQF---- ---------- ---------- ENSBTAP00000018647/1-403 LLRINEQIPM LGLGGALVFT RIQRGF---- ---------- ---------- ENSP00000286353/1-480 MLFRNRFLLL LALAALLAFV SLSLQF---- ---------- ---------- bmy_17672T0/1-457 M--------- -CVVTCFAFS A--------- ---------- ---------- BACU012759/1-584 MLFRNRFVLL LALAALLAFV SLSLQFCGSV DAAFIHASTQ PLTQTAPPPG 51 100 ENSTTRP00000003086/1-480 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018647/1-403 ---------- ---------- ---------- ---------- ---------- ENSP00000286353/1-480 ---------- ---------- ---------- ---------- ---------- bmy_17672T0/1-457 ---------- ---------- ---------- ---------- ---------- BACU012759/1-584 LSVPKAEGST RHTFWEVDHV ELLALDEEAW GEHPEQAEKQ DKPRQPGGSR 101 150 ENSTTRP00000003086/1-480 ---------- ---------- ---------- XXXXXXXXXX XXXXXXXXXX ENSBTAP00000018647/1-403 ---------- ---------- ---------- IHLIPVLATK NGVTSKSRKR ENSP00000286353/1-480 ---------- ---------- ---------- FHLIPVSTPK NGMSSKSRKR bmy_17672T0/1-457 ---------- ---------- ---------- VHLIPVLAAK NGMTSKNRKR BACU012759/1-584 AGGRAGASCL PPFEVGCWHL QLQLFVGPPE VHLIPVSAAK NGVTSKNRKR 151 200 ENSTTRP00000003086/1-480 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXHAPHHF KLVSVHVFIR ENSBTAP00000018647/1-403 IMPDPATEPP VMDPVYEALL YCNIPGVAER SMEGHAPHHF KLVSAHVFIR ENSP00000286353/1-480 IMPDPVTEPP VTDPVYEALL YCNIPSVAER SMEGHAPHHF KLVSVHVFIR bmy_17672T0/1-457 IMPDPVTEPP VMDPVYEALL YCNIPR---- ----HAPHHF KLVSVHVFIR BACU012759/1-584 IMPDPVTEPP VMDPVYEALL YCNIPRVAER SMEGHAPHHF KLVSVHVFIR 201 250 ENSTTRP00000003086/1-480 HGDRYPLYVI PKTKRPEIDC TLVANRKPYH PKLEAFVSHM SKGSGASFES ENSBTAP00000018647/1-403 HGDRYPLYAI PKTKRPEIDC TLVANRKPYH SKLEAFVNHM SKGPGAAFES ENSP00000286353/1-480 HGDRYPLYVI PKTKRPEIDC TLVANRKPYH PKLEAFISHM SKGSGASFES bmy_17672T0/1-457 HGDRYPLYVI PKTKRPEIDC TLVANRKPYH PKLEAFVSHM SKGSGASFES BACU012759/1-584 HGDRYPLYVI PKTKRPEIDC TLVANRKPYH PKLEAFVSHM SRGSGASFES 251 300 ENSTTRP00000003086/1-480 PLHSLPLYPS HQLCEMGELT QTGVVQHLQN GQLLRDVYLK KHRLLPSDWS ENSBTAP00000018647/1-403 PLHSLPLYSS HQLCEMGELT QTGVVQHLQN GQLLRDIYLK KHKLLPSDWA ENSP00000286353/1-480 PLNSLPLYPN HPLCEMGELT QTGVVQHLQN GQLLRDIYLK KHKLLPNDWS bmy_17672T0/1-457 PLHSLPLYPS HQLCEMGELT QTGVVQHLQN GQLLRDIYLK KHKLLPSDWS BACU012759/1-584 PLHSLPLYPS HQLCEMGELT QTGVVQHLQN GQLLRDIYLK KHRLLPHDWS 301 350 ENSTTRP00000003086/1-480 TEQLRLETTG KSRTLQSGLA LLYGFLPDFD WKKIYFRHQP SALFCSGNCY ENSBTAP00000018647/1-403 AEQLHLETTG KSRTLQSGLA LLYGFLPDFD WKKVYFRHQP SALFCSGNCY ENSP00000286353/1-480 ADQLYLETTG KSRTLQSGLA LLYGFLPDFD WKKIYFRHQP SALFCSGSCY bmy_17672T0/1-457 TKQLHLETTG KSRTLQSGLA LLYGFLPDFD WKKIYFRHQP SALFCSGNCY BACU012759/1-584 TKQLHLETTG KSRTLQSGLA LLYGFLPDFD WKKIYFRHQP SALFCSGNCY 351 400 ENSTTRP00000003086/1-480 CPLRNQYLEK EQRRQYLLRL KNRQLERTYE EMARIVDTST KQLRAANPID ENSBTAP00000018647/1-403 CPLRNQYLEK EQRRQYLLRL NNRQLERTYE EMARIVDIPT KQLRAANPID ENSP00000286353/1-480 CPVRNQYLEK EQRRQYLLRL KNSQLEKTYG EMAKIVDVPT KQLRAANPID bmy_17672T0/1-457 CPLRNQYLEK EQHRQYLLRL KNRQLERTYE EMARIVDTPT KQLRAANPID BACU012759/1-584 CPLRNQYLEK EQRRQYLLRL KNRQLERTYE EMARIVDAPT KQLRAANPID 401 450 ENSTTRP00000003086/1-480 AMLCLFCHNV SFPCTRNGCV NMEHFKVIKR HQIEDESERR EKKLYLGYAL ENSBTAP00000018647/1-403 SLLCLFCHNV SFPCTKNGCI TMDHFKVIKT HQIEDEREX- ---------- ENSP00000286353/1-480 SMLCHFCHNV SFPCTRNGCV DMEHFKVIKT HQIEDERERR EKKLYFGYSL bmy_17672T0/1-457 AMLCLFCHNV SFPCTRNGCV NMEHFKVIKR HQIEDERERQ EKKLYLGYAL BACU012759/1-584 AMLCLFCHNV SFPCTRNGCV NMEHFKVIKR HQIEDERERQ EKKLYLGYAL 451 500 ENSTTRP00000003086/1-480 LGAHPILNQT VGRMRRAAEG RKEELFALSS AHDVTLAPIL SALGLTEARF ENSBTAP00000018647/1-403 ---------- ---------- ---------- ---------- ---------- ENSP00000286353/1-480 LGAHPILNQT IGRMQRATEG RKEELFALYS AHDVTLSPVL SALGLSEARF bmy_17672T0/1-457 LGAHPILNQT VGRMRRAAEG RKEELFALSS AHDVTLAPIL SALGLTEARF BACU012759/1-584 LGAHPILNQT VGRMRRAAEG RKEELFALSS AHDVTLAPIL SALGLTEARF 501 550 ENSTTRP00000003086/1-480 PRFAARLIFE LWQDREKPGE HSVRILYDGV DVTFHTSFCQ DHHKRSPKPM ENSBTAP00000018647/1-403 ---------- ------KPRE HSIRILYDGV DITFYTSFCQ DHHRRSPKPM ENSP00000286353/1-480 PRFAARLIFE LWQDREKPSE HSVRILYNGV DVTFHTSFCQ DHHKRSPKPM bmy_17672T0/1-457 PRFAARLIFE LWQDREKPGE HSVRILYDGV DVTFHTSFCQ DHHRRSPKPM BACU012759/1-584 PRFAARLIFE LWQDREKPGE HSVRILYDGV DVTFHTSFCQ DHHRRSPKPM 551 600 ENSTTRP00000003086/1-480 CPLENFVRFV KRDMFVALGS GSTNYFDACH REGS ENSBTAP00000018647/1-403 CPLENLVRFI KKDMFVALGG GSTNYYEACH REGF ENSP00000286353/1-480 CPLENLVRFV KRDMFVALGG SGTNYYDACH REGF bmy_17672T0/1-457 CPLENFVHFV KRDMFVALGS GSTNYYDACH REGS BACU012759/1-584 CPLENFVRFV KRDMFVALGS GSTNYYDACH REGS