KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:16 2014 Check: 00 .. Name: ENSP00000344446/1-1430 Len: 1436 Check: 9109 Weight: 1.00 Name: ENSBTAP00000018650/1-1434 Len: 1436 Check: 5081 Weight: 1.00 Name: ENSTTRP00000004802/1-1432 Len: 1436 Check: 644 Weight: 1.00 Name: bmy_22522T0/1-815 Len: 1436 Check: 9063 Weight: 1.00 Name: BACU000961/1-1433 Len: 1436 Check: 8663 Weight: 1.00 // 1 50 ENSP00000344446/1-1430 MTSAAEIKKP PVAPKPKFVV ANNKPAPPPI APKPDIVISS VPQSTKKMKP ENSBTAP00000018650/1-1434 YFPFLEIKKP PVAPKPKFVL AANKPAPPPV APKPEILVSS VPQSTKKTKP ENSTTRP00000004802/1-1432 MTSAAEIKKP PVAPKPKFVV ANNKPAPPPV APKPEIVVSS VPQSTKKTKP bmy_22522T0/1-815 MTSAAEIKKP PVAPKPKFVV ANNKPAPPPV APKPEIVVSS VPQSTKKTKP BACU000961/1-1433 MTSAAEIKKP PVAPKPKFVV ANNKPAPPPV APKPEIVVSS VPQSTKKTKP 51 100 ENSP00000344446/1-1430 AIAPKPKVLK TSPVREIGQS PSRKIMLNLE GHKQELAEST DNFNCKYEGN ENSBTAP00000018650/1-1434 SIAPKPKVLK ASPVQDITQS PSRKIVVNLE EHTQEFPESI DNSNCRNRGH ENSTTRP00000004802/1-1432 AIAPKPKVLK ASPVQDIRRS PSRKIIVNLE EHKQESPESI DNSSCKNRGH bmy_22522T0/1-815 AIAPKPXVLK ASPXQDIRQS PSRKIIVNLE EHKQEFPESI DNSSCKNRGH BACU000961/1-1433 AIAPKPKVLK ASPVQDIRQS PSRKIIVNLE EHKQEFPEST DNSSCKNRGH 101 150 ENSP00000344446/1-1430 QSNDYISPMC SCSSECIHKL GHRENLCVKQ LVLEPLEMNE NLENSKIDET ENSBTAP00000018650/1-1434 PSSDYILPVC SCHPGCNHKL ESRKNLYVKQ LVLGPLEMHE NLENNKIGES ENSTTRP00000004802/1-1432 QSSDYILPMC SCRSECNHKL GNRENLCVKQ LVLGPLEMHE NLENNKIGES bmy_22522T0/1-815 QSSDYILPMC SCRSECNHKL GNRENLCVKQ LVLGPLEMHE NLENNKIGES BACU000961/1-1433 QSSDYILPMC SCRSECNHKL GNRENLCVKQ LVLGPLEMHE NLENNKIGES 151 200 ENSP00000344446/1-1430 LT-IKTRSKC DLYGEKAKNQ GGVVLKASVL EEELKDALIH QMPPFISAQK ENSBTAP00000018650/1-1434 PSAVKNQHKC DSVGERVKSQ SKVVLKASIL EEKLKDVLTQ PMSPFLFPQK ENSTTRP00000004802/1-1432 SSAIKTQRKC DSNDEKIKSQ SEVVLKASIL EEKLKDVLTQ RTSPFIFPQK bmy_22522T0/1-815 SSAIKTQRKC DSNDEKVKSQ SEVVLKASIL EEKLKDVLTQ RTSPFIFPQK BACU000961/1-1433 SSAIKIQRKC DSNDEKVKSQ SEVVLKANIL EEKLKDVLTQ RTSPFIFPQK 201 250 ENSP00000344446/1-1430 HRPTDSPEMN GGCNSNGQFR IEFADLSPSP SSFEKVPDHH SCHLQLPSDE ENSBTAP00000018650/1-1434 HRSTDSPEMS DGCNSHRQFS IEFADLSPSL SSFENVSNHH PCHLQLPSTE ENSTTRP00000004802/1-1432 HRFTDSPEMS DGCNSNRQFR IEFADLSPSL SSFEKVSDHH HCHLQLPSDE bmy_22522T0/1-815 HRFTDSPEMS DGCNSNRQFR IEFADLSPSL SSFEKVSDHH HCHLQLPSDE BACU000961/1-1433 HRFTDSPEMS DGCNSNRQFR IEFADLSPSL SSFEKVSDHH HCHLQLTSDE 251 300 ENSP00000344446/1-1430 CEHFETCQDD SEKSNNCFQS SELEALENGK RSTLISSDGV SKKSEVKDLG ENSBTAP00000018650/1-1434 FQNFETNQND SEKSNTCYHS SEQEALENGK RSPFLSSDGD SKKSEARDLG ENSTTRP00000004802/1-1432 FQNFEANQGD NEKSNTHFHS SEQEALENGK RSTFLSSDGD IKKSEVKDLG bmy_22522T0/1-815 FQNFETSQGD SEKSNTYFHS SEQEALENGK RSTFLSSDRD IKKSEVKDLG BACU000961/1-1433 FQNFETSQGD SEKSNTYFHS SEQEALENGK RSTFLSSDRD IKKSEVKDLG 301 350 ENSP00000344446/1-1430 PLEIHLVPYT PKFPTPKPRK TRTARLLRQK CVDTPSESTE EPGNSDSSSS ENSBTAP00000018650/1-1434 PLEIHLVPCT PKFPTPKPRK THVARLLRQR HIDTSSESTE EPEDVD-SLP ENSTTRP00000004802/1-1432 PLEIHLVPYT PKFPTPKPRK TRAARLLRQK QIDTPSESNE EPENVDSSSL bmy_22522T0/1-815 PLEIHLVPYT PKFPTPKPRK TRAARLLRQK HIDTPSESTE EPENVNSSSP BACU000961/1-1433 PLEIHLVPYT PKFPTPKPRK TRAARLLRQK HIDTPSESTE EPENVDSSSP 351 400 ENSP00000344446/1-1430 CLTENSLKIN KISVLHQNVL CKQEQVDKMK LGNKSELNME SNSDAQDLVN ENSBTAP00000018650/1-1434 HVFEDSLKNN KISVFHQTAL CNQEQVDKVK PENKGELNVD LTGDRQNSVY ENSTTRP00000004802/1-1432 CLFEDSLKNN KISVFHRNVL CNQEQVDKVK PGNKSELNVD FNGDRQNLIN bmy_22522T0/1-815 CLFEDSLKNN KISVFHRNVL CNQEQVDKVK PGNKSELNVD FSGDRQNLXN BACU000961/1-1433 CLFEDSLKNN KISVFHRNVL CNQEQVDKVK PGNKSELNVD FSGDRQNLIN 401 450 ENSP00000344446/1-1430 SQKAMCNETT SFEKMAPSFD KDSNLSSDST TVDGSSMSLA VDEGTGFIRC ENSBTAP00000018650/1-1434 SQKALRPETF SSEKTAPPLE TDSNLSSDDK SGDSSGMSLA EDKGISFIRC ENSTTRP00000004802/1-1432 SQKPLSPETS SFENMPSPLE TDSNLNSD-K TGDGSSMSPA VDKRTSFIRC bmy_22522T0/1-815 SQKALCPETS SFENMASPLE TDSNLSSD-K TGDGSSMSPA VDKRTSFIRC BACU000961/1-1433 SQKALCPETS SFENMASPLE TDSNLSSD-K TGDGSSMSPA VDKRTSFIRC 451 500 ENSP00000344446/1-1430 -TVSMSLPKQ LKLTCNEHLQ SGRNLGVSAP QMQKESVIKE ENSLRIVPKK ENSBTAP00000018650/1-1434 STLSMSLPKQ LKLTCSEHLP TASNPGVSAP QMQKESMIKG ESSSKVVPKK ENSTTRP00000004802/1-1432 STLSMSLPKQ LKLTCTEHLP TACNRGVSAP QLQKESMIKD ESSSRIVPKK bmy_22522T0/1-815 STLSMSLPKQ LRLTCTEHLP TACNPGVSAP QLQKESMIKD ESSSRIVPKK BACU000961/1-1433 STLSMSLPKQ LRLTCTEHLP TACNPGVSAP QLQKESMIKD ESSSRIVPKK 501 550 ENSP00000344446/1-1430 PQRHSLPATG VLKKAASEEL LEKSSYPSSE EKSSEKSLER NHLQHLCAQN ENSBTAP00000018650/1-1434 PQRHSLPAAG VLKKAASEEL LEKSSYPSNE EKDAEKGLER DHVQHLCAPN ENSTTRP00000004802/1-1432 PQRHSLPAAG VLKKAASEEL VEKSSYPSNE EKSSEKGLER NHLQHLCAQN bmy_22522T0/1-815 PQRHSLPSAG VLKKAASEEL VEKSSYPSNE EKSSEKGLER NHLQHLCAQN BACU000961/1-1433 PQRHSLPSAG VLKKAASEEL VEKSSYPSNE EKSSEKGLER NHLQHLCAQN 551 600 ENSP00000344446/1-1430 RGVSSSFDMP KRASEKPVWK LPHPILPFSG NPEFLKSVTV SSNSEPSTAL ENSBTAP00000018650/1-1434 NGMSSSFDMP KRASEKPVWK LPHPIIPFSG NPESLKSVTI SSNSETPTPL ENSTTRP00000004802/1-1432 RGVSSSFDIP KRASEKPVWK LPHPIIPFSG NPESLKSVTV SSNSEPPTAL bmy_22522T0/1-815 HGVSSSFDMP KRASEKPVWK LPHPIIPFSG NPESLKSVTI SSNSEPPTAL BACU000961/1-1433 HGVSSSFDMP KRASEKPVWK LPHPIIPFSG NPESLKSVTI SSNSEPPTAL 601 650 ENSP00000344446/1-1430 TKPRAKSLSA MDVEKCTKPC KDSTKKNSFK KLLSMKLSIC FMKSDFQKFW ENSBTAP00000018650/1-1434 TKPRAKSLSA MDVERCTKPC KDSHKKNSLK KLLNMKLSIC FMKSDFQKFW ENSTTRP00000004802/1-1432 TKPRAKSLSA VDVERCTKPC KDSQKKNSLK KLLNMKLSIC FMKSDFQKFW bmy_22522T0/1-815 TKPRAKSLSA VDVERCTKPC KDSQKKNSLK KLLNMKLSIC FMKSDFQKFW BACU000961/1-1433 TKPRAKSLSA VDAERCTKPC KDSLKKNSLK KLLNMKLSIC FMKSDFQKFW 651 700 ENSP00000344446/1-1430 SKSSQLGDTT TGHLSSGEQK GIESDWQGLL VGEEKRSKPI KAYSTENYSL ENSBTAP00000018650/1-1434 SKHSHLGDTT SGSLAGGEQR GSESDWHGLL VGEEKRSKPI KAYSADNYSL ENSTTRP00000004802/1-1432 SKSSQLGDTT SGSLAGGERK GSESDWHGFL V-EEKRNKPI KAYSADNYSL bmy_22522T0/1-815 SKSSQLGDTT SGSLAGGERX GSESDWHGLL V-EEKRNKPI KAYSSDNYSL BACU000961/1-1433 SKSSQLGDTT SGSLAGGERK GSESDWHGLL V-EEKRNKPI KAYSTDNYSL 701 750 ENSP00000344446/1-1430 ESQKKRKKSR GQTSAANGLR AESLDDQMLS RESSSQAPYK SVTSLCAPEY ENSBTAP00000018650/1-1434 ESHKKRKKLR GHTNAANGPR AESLDDQMLS RESSLQAPCK SVTSDCVPEY ENSTTRP00000004802/1-1432 ESQKKRKKSR GQTSAANGPR AESLDEQMLS RESSSQAPCK SVISGCAPEY bmy_22522T0/1-815 ESQKKRKKSR GQTSAANGPR AESLDDQLLS RESSLQAPCK SVISGCAPEY BACU000961/1-1433 ESQKKRKKSR GQTSAANGPR AESLDDQLLS RESSSQAPGK SVISGCAPEY 751 800 ENSP00000344446/1-1430 ENIRHYEEIP EYENLPFIMA IRKTQELEWQ NSSSMEDADA NVYEVEEPYE ENSBTAP00000018650/1-1434 ENIRHYEEIP EYENLPFVMA MGKTPELERR NSSSVEDTDA NVYEVQEPYE ENSTTRP00000004802/1-1432 ENIRHYEEIP EYENLPFIMT VGKTPELEWQ NSSSVEDTDA NVYEVEEPYE bmy_22522T0/1-815 ENIRHYEEIP EYENLPFIMT VGKTPELEWQ NSSSMEDTDA NVYEVEEPYE BACU000961/1-1433 ENIRHYEEIP EYENLPFIMT VGKTPELEWQ NSSSVEDTDA NVYEVEEPYE 801 850 ENSP00000344446/1-1430 APDG-QLQLG PRHQHSS-SG ASQEEQN--D LGLGDLPSDE EEIINSSDED ENSBTAP00000018650/1-1434 APDG-QLQLG PRHQHSSSSG ASQEGQSDLD LGLGDLPSDE EEVINSSDED ENSTTRP00000004802/1-1432 APDG-QLQLA PRHQHSS-SG ASQEGPNDLD LHLSDLPSDE EEVINSSDED bmy_22522T0/1-815 APDGSKLQLE PRHQHSR--- ---------- ---------- ---------- BACU000961/1-1433 APDG-QLQLE PRRQHSSSSG ASQEGHNDLD LRLSDLPSDE EEVINSSDED 851 900 ENSP00000344446/1-1430 DVSSESSKGE PDPLEDKQDE DNGMKSKVHH IAKEIMSSEK VFVDVLKLLH ENSBTAP00000018650/1-1434 DVSSASSKGE PDLLDDKQGE DTGMKCKVHH IAKEIMSSEK VFVDVLKLLH ENSTTRP00000004802/1-1432 NVSSASSKGE PDLLEDKQGE DTGMKSKVHH IAKEIMSSEK VFVDVLKLLH bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 NVSSASSKGE PDLLEDKQGE DTGMKSKVHH IAKEIMSSEK VFVDVLKLLH 901 950 ENSP00000344446/1-1430 IDFRDAVAHA SRQLGKPVIE DRILNQILYY LPQLYELNRD LLKELEERML ENSBTAP00000018650/1-1434 IDFRDAVAHA SRQLGKPVIE DRILNQILYY LPQLYELNRD LLKELEERMS ENSTTRP00000004802/1-1432 IDFRDAVAHA SRQLGKPVIE DRILNQILYY LPQLYELNRD LLKELEERML bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 IDFRDAVAHA SRQLGKPVIE DRILNQILYY LPQLYELNRD LLKELEERML 951 1000 ENSP00000344446/1-1430 HWTEQQRIAD IFVKKGPYLK MYSTYIKEFD KNIALLDEQC KKNPGFAAVV ENSBTAP00000018650/1-1434 NWTEQQRIAD IFVKKGPYLK MYSTYIKEFD KNIALLDEQC KKNPGFAAVV ENSTTRP00000004802/1-1432 NWTEQQRIAD IFVKKGPYLK MYSTYIKEFD KNIALLDEQY KKNPGFAAVV bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 NWTEQQRIAD IFVKKGPYLK MYSTYIKEFD KNIALLDEQY KKNPGFAAVV 1001 1050 ENSP00000344446/1-1430 REFEMSPRCA NLALKHYLLK PVQRIPQYRL LLTDYLKNLI EDAGDYRDTQ ENSBTAP00000018650/1-1434 REFEMSPRCA NLALKHYLLK PVQRIPQYRL LLTDYLKNLL EDSGDYRDTQ ENSTTRP00000004802/1-1432 REFEMSPRCA NLALKHYLLK PVQRIPQYRL LLTDYLKNLL EDAGDYRDTQ bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 REFEMSPRCA NLALKHYLLK PVQRIPQYRL LLTDYLKNLL EDAGDYRDTQ 1051 1100 ENSP00000344446/1-1430 DALAVVIEVA NHANDTMKQG DNFQKLMQIQ YSLNGHHEIV QPGRVFLKEG ENSBTAP00000018650/1-1434 DALAVVIEVA NHANDTMKQG DNFQKLMQIQ YSLNGHHEIV QPGRVFLKEG ENSTTRP00000004802/1-1432 DALAVVIEVA NHANDTMKQG DNFQKLMQIQ YSLNGHHEIV QPGRVFLKEG bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 DALAVVIEVA NHANDTMKQG DNFQKLMQIQ YSLNGHHEIV QPGRVFLKEG 1101 1150 ENSP00000344446/1-1430 ILMKLSRKVM QPRMFFLFND ALLYTTPVQS GMYKLNNMLS LAGMKVRKPT ENSBTAP00000018650/1-1434 ILMKLSRKVM QPRMFFLFND ALLYTTPVQS GMYKLNNMLS LAGMKVRKPT ENSTTRP00000004802/1-1432 ILMKLSRKVM QPRMFFLFND ALLYTTPVQS GMYKLNNMLS LAGMKVRKPT bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 ILMKLSRKVM QPRMFFLFND ALLYTTPVQS GMYKLNNMLS LAGMKVRKPT 1151 1200 ENSP00000344446/1-1430 QEAYQNELKI ESVERSFILS ASSATERDEW LEAISRAIEE YAKKRITFCP ENSBTAP00000018650/1-1434 QEAYQNELKI ESVERSFILS ASSAPERDEW LEAISRSIEE YAKKRITFCP ENSTTRP00000004802/1-1432 QEAYQNELKI ESVERSFILS ASSAPERDEW LEAISRSIEE YAKKRITFCP bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 QEAYQNELKI ESVERSFILS ASSAPERDEW LEAISRSIEE YAKKRITFCP 1201 1250 ENSP00000344446/1-1430 SRSLDEADSE NKEEVSPLGS KAPIWIPDTR ATMCMICTSE FTLTWRRHHC ENSBTAP00000018650/1-1434 SRSLDEADSE DKDEVSPLGS KAPIWIPDTR ATMCMICTSE FTLTWRRHHC ENSTTRP00000004802/1-1432 SRSLDEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 SRSLDEADSE NKDEVSPLGS KAPIWIPDTR ATMCMICTSE FTLTWRRHHC 1251 1300 ENSP00000344446/1-1430 RACGKIVCQA CSSNKYGLDY LKNQPARVCE HCFQELQKLD HQHSPRIGSP ENSBTAP00000018650/1-1434 RACGKIVCQA CSSNKYGLDY LKNQPARVCE HCFQELQKLD HQHSPKFGSP ENSTTRP00000004802/1-1432 XXXXXIVCQA CSSNKYGLDY LKNQPARVCE HCFQELQKLD HQHSPNIGSP bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 RACGKIVCQA CSSNKYGLDY LKNQPARVCE HCFQELQKLD HQHSPKIGSP 1301 1350 ENSP00000344446/1-1430 GNHKSPSSAL SSVLHSIPSG RKQKKIPAAL KEVSANTEDS SMSGYLYRSK ENSBTAP00000018650/1-1434 GNHKSPSSAL SSVLHSIPSG RKQKKIPAAL KEVSANTEDS SMSGYLYRSK ENSTTRP00000004802/1-1432 GYHQSPSSTL SSVLHSIPSG RKQKKIPAAL KEVSANTEDS SMSGYLYRSK bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 GNHKSPSSTL SSVLHSIPSG RKQKKIPAAL KEVSANTEDS SMSGYLYRSK 1351 1400 ENSP00000344446/1-1430 GNKKPWKHFW FVIKNKVLYT YAASEDVAAL ESQPLLGFTV IQVKDENSES ENSBTAP00000018650/1-1434 GNKKPWKHLW FVIKNKVLYT YAASEDVAAL ESQPLLGFTV TQVKDENSES ENSTTRP00000004802/1-1432 GNKKPWKHLW FVIKNKVLYT YAASEDVAAL XXXXXXXXXX XXXXXXXXXX bmy_22522T0/1-815 ---------- ---------- ---------- ---------- ---------- BACU000961/1-1433 GNKKPWKHLW FVIKNKVLYT YAASEDVAAL ESQPLLGFTV TQVKDENSES 1401 1450 ENSP00000344446/1-1430 KVFQLLHKNM LFYVFKAEDA HSAQKWIEAF QEGTIL ENSBTAP00000018650/1-1434 RVFQLLHKNM LFYVFKADDA HSAQKWIEAF QEGTIL ENSTTRP00000004802/1-1432 XXXXXXXXXX XXXXXXXXXX XXXXXWIEAF QEGTIL bmy_22522T0/1-815 ---------- ---------- ---------- ------ BACU000961/1-1433 RVFQLLHKNM LFYVFKADDA HSAQKWIEAF QEGTIL