KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:05:17 2014 Check: 00 .. Name: ENSBTAP00000018668/1-628 Len: 647 Check: 7469 Weight: 1.00 Name: ENSP00000395007/1-645 Len: 647 Check: 2057 Weight: 1.00 Name: bmy_21020T0/1-419 Len: 647 Check: 523 Weight: 1.00 Name: ENSTTRP00000002473/1-620 Len: 647 Check: 3288 Weight: 1.00 // 1 50 ENSBTAP00000018668/1-628 MAEAAAAPIS PWTMAATIQA MERKIESQAA RLLSLEGRTG MAEKKLADCE ENSP00000395007/1-645 MAEAVAAPIS PWTMAATIQA MERKIESQAA RLLSLEGRTG MAEKKLADCE bmy_21020T0/1-419 ---------- ---------- ---------- ---------- MAEKKLADCE ENSTTRP00000002473/1-620 --------IS PWTMAATIQA MERKIESQAA RLLSLEGRTG MAEKKLADCE 51 100 ENSBTAP00000018668/1-628 KTAVEFGNQL EGKWAVLGTL LQEYGLLQRR LENVENLLRN RNFWILRLPP ENSP00000395007/1-645 KTAVEFGNQL EGKWAVLGTL LQEYGLLQRR LENVENLLRN RNFWILRLPP bmy_21020T0/1-419 KTAVELGNQL EGKWAVLGTL LQEYGLLQRR LENVENLLRN RNFWXLRLPP ENSTTRP00000002473/1-620 KTAVELGNQL EGKWAVLGTL LQEYGLLQRR LENVENLLRN RNFWILRLPP 101 150 ENSBTAP00000018668/1-628 GSKGEAPKEW GKLDEWQKEL YKHVMRGNYE TLVSLDYAIS KPEVLSQIEQ ENSP00000395007/1-645 GSKGESPKEW GKLEDWQKEL YKHVMRGNYE TLVSLDYAIS KPEVLSQIEQ bmy_21020T0/1-419 GSKGEAPK-- ---------- ---------- ---------- -------IEQ ENSTTRP00000002473/1-620 GSKGEAPKEW GNLSEWQKEL YKHVMRGNYE TLVSLDYAIS KPEVLSQIEQ 151 200 ENSBTAP00000018668/1-628 GKEPCSWRRA GPKVPDVPVD PSPGSGPPVP APDLLMQIKQ EGELQLQEQQ ENSP00000395007/1-645 GKEPCNWRRP GPKIPDVPVD PSPGSGPPVP APDLLMQIKQ EGELQLQEQQ bmy_21020T0/1-419 GKEPCIWRRT GPKVPDVPVD PSPGSGPPVP APDLLMQIKQ EGELQLQAQQ ENSTTRP00000002473/1-620 GKEPCSWRRA GPKVPDVPVD PSPGSGPPVP APDLLMQIKQ EGELQLQEQQ 201 250 ENSBTAP00000018668/1-628 ALGVEAWAAG QPDIGEEPWG LSQLDSGAGD VSTDAASGEW LRLRADKFPT ENSP00000395007/1-645 ALGVEAWAAG QPDIGEEPWG LSQLDSGAGD ISTDATSGVH SNFSTTIPPT bmy_21020T0/1-419 ALGVEAWAAG QPDIGEEPWG LGQLDSGAAD VSTDAASGVH SNFSTTIPPT ENSTTRP00000002473/1-620 ALGVEAWAAG QPDIGEEPWG LSQLDSGAGD VSTDAASGVH SNFSTTIPPT 251 300 ENSBTAP00000018668/1-628 SWQGLLQPH- PCSSCPQGIL -LSDAASTEA DVKIVIKTEV QEEEVVATPV ENSP00000395007/1-645 SWQTDLPPHH PSSACSDGTL KLNTAASTEA DVKIVIKTEV QEEEVVATPV bmy_21020T0/1-419 SWQADLPPHH PSSACSDGSL KLSTAASTEA DVKIVIKTEV QEEEVVATPV ENSTTRP00000002473/1-620 SWQADLPPHH PSSACSDGTL KLSTAASTE- DVKIVIKTEV QEEEVVATPV 301 350 ENSBTAP00000018668/1-628 HPTDLEAHGT LFGPGQATRF FPSPVQEGAW ESQGSSFPSQ DPVLGLREPA ENSP00000395007/1-645 HPTDLEAHGT LFGPGQATRF FPSPAQEGAW ESQGSSFPSQ DPVLGLREPA bmy_21020T0/1-419 HPTDLEAHAT LFGPGQATRF FPSPVQEGAW ESQGSSFPSQ DPVLGLREPA ENSTTRP00000002473/1-620 HPTDLEAHAT LFGPGQATRF FPSPVQEGAW ESQGSSFPSQ DPVLGLREPA 351 400 ENSBTAP00000018668/1-628 RPERDLGDPT PTVPQDETSP GDWLFGGVRW GWNFRCKPPA GLNPRTGPEG ENSP00000395007/1-645 RPERDMGELS PAVAQEETPP GDWLFGGVRW GWNFRCKPPV GLNPRTGPEG bmy_21020T0/1-419 RPERELGEPS PAVTQDETPP GDWLFGGVRW GWNFRCKPPA GLNPRTGPEG ENSTTRP00000002473/1-620 RPERELGEPS PAVTQDETPP GDWLFGGVRW GWNFRCKPPA SLNPRTGPEG 401 450 ENSBTAP00000018668/1-628 LPFSSSDNGE AVLDPGQAPR PFNDPCKYPG RTKGFGHKPG LKKHPAAPPG ENSP00000395007/1-645 LPYSSPDNGE AILDPSQAPR PFNEPCKYPG RTKGFGHKPG LKKHPAAPPG bmy_21020T0/1-419 LPYSSSDNGE AVLDPGQAPR PFSDPCKYPG RTKGFGHKPG LKKHPAAPPG ENSTTRP00000002473/1-620 LAYSSPDNGE AVLDPGQAPR PFSDPCKYPG RTKGFGHKPG LKKHPAAPPG 451 500 ENSBTAP00000018668/1-628 GRPFTCATCG KSFQLQVSLS AHQRSCG--- ---------- ---GQPDGVP ENSP00000395007/1-645 GRPFTCATCG KSFQLQVSLS AHQRSCGAPD GSGPGTGGGG SGSGGGGGGS bmy_21020T0/1-419 GRPFTCAACG KSFQLQ---- ---------- ---------- ---------- ENSTTRP00000002473/1-620 GRPFTCAACG KSFQLQVSLS AHQRSCG--- ---------- ---GLPDGAG 501 550 ENSBTAP00000018668/1-628 GAAGSARDGS GLRCGECGRC FTRPAHLIRH RMLHTGERPF PCTECEKRFT ENSP00000395007/1-645 G-GGSARDGS ALRCGECGRC FTRPAHLIRH RMLHTGERPF PCTECEKRFT bmy_21020T0/1-419 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002473/1-620 G-GGGARDGS GLRCGECGRC FTRPAHLIRH RMLHTGERPF PCTECEKRFT 551 600 ENSBTAP00000018668/1-628 ERSKLIDHYR THTGVRPFTC TVCGKSFIRK DHLRKHQRNH AAGAK-PARG ENSP00000395007/1-645 ERSKLIDHYR THTGVRPFTC TVCGKSFIRK DHLRKHQRNH AAGAKTPARG bmy_21020T0/1-419 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002473/1-620 ERSKLIDHYR THTGVRPFTC TVCGKSFIRK DHLRKHQRNH AAGAK-PARG 601 650 ENSBTAP00000018668/1-628 QPLPPLPAVP PDPFKSPAAK GPLAPTDLVT DWTCGLSVLG PTDGGDL ENSP00000395007/1-645 QPLPTPPA-P PDPFKSPASK GPLASTDLVT DWTCGLSVLG PTDGGDM bmy_21020T0/1-419 ---------- -----SPASK GPLASTDLVT DWTCGLSVLG PTDGGDL ENSTTRP00000002473/1-620 QPLPPLPAVP PDPFKSPASK GPLASTDLVT DWTCGLSVLG PTDGGDL