KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:18 2014 Check: 00 .. Name: ENSTTRP00000008470/1-337 Len: 337 Check: 7159 Weight: 1.00 Name: ENSP00000358565/1-337 Len: 337 Check: 6909 Weight: 1.00 Name: ENSBTAP00000018680/1-337 Len: 337 Check: 8567 Weight: 1.00 Name: bmy_17871T0/1-249 Len: 337 Check: 181 Weight: 1.00 Name: BACU016923/1-306 Len: 337 Check: 5248 Weight: 1.00 // 1 50 ENSTTRP00000008470/1-337 MATQRENVNL LFKLYCLAVM TLVAATYTIA LRYTRTSDKE LYFSTTAVCI ENSP00000358565/1-337 MAAPRDNVTL LFKLYCLAVM TLMAAVYTIA LRYTRTSDKE LYFSTTAVCI ENSBTAP00000018680/1-337 MAAPRENVNL LFKLYCLAVM TLVAAAYTVA LRYTRTSDKE LYFSTTAVCI bmy_17871T0/1-249 ---------- ---------- ---------- ---------- ---------- BACU016923/1-306 ---------- ---------- -MTQEAVPGA LRSAREGGER QFRAV----- 51 100 ENSTTRP00000008470/1-337 TEVIKLLLSV GILAKETGNL GRFKASLREN VLGSPKELMK LSVPSLVYAV ENSP00000358565/1-337 TEVIKLLLSV GILAKETGSL GRFKASLREN VLGSPKELLK LSVPSLVYAV ENSBTAP00000018680/1-337 TEVIKLLLSV GILAKETGNL GRFKASLREN VLGSPKELMK LSVPSLVYAV bmy_17871T0/1-249 ---------- ---------- ---------- --------MK LSVPSLVYAV BACU016923/1-306 -----LSGNH GCRERETGNL GRFKASLREN VLGSPKELMK LSVPSLVYAV 101 150 ENSTTRP00000008470/1-337 QNNMAFLALS NLDAAVYQVT YQLKIPCTAL CTVLMLNRTL SRLQWISVFM ENSP00000358565/1-337 QNNMAFLALS NLDAAVYQVT YQLKIPCTAL CTVLMLNRTL SKLQWVSVFM ENSBTAP00000018680/1-337 QNNMAFLALS NLDAAVYQVT YQLKIPCTAL CTVLMLNRTL SKLQWISVFM bmy_17871T0/1-249 QNNMAFLALS NLDAAVYQVT YQLKIPCTAL CTVLMLNRTL SRLQWISVFM BACU016923/1-306 QNNMAFLALS NLDAAVYQVT YQLKIPCTAL CTVLMLNRTL SRLQWISVFM 151 200 ENSTTRP00000008470/1-337 LCGGVVLVQW RPAQATGVVV EQNPLLGFGA IAVAVLCSGF AGVYFEKVLK ENSP00000358565/1-337 LCAGVTLVQW KPAQATKVVV EQNPLLGFGA IAIAVLCSGF AGVYFEKVLK ENSBTAP00000018680/1-337 LCGGVILVQW KPAQATKVVV EQNPLLGFGA IAVAVLCSGF AGVYFEKVLK bmy_17871T0/1-249 LCGGVVLVQW RPAQATGVVV EQNPLLGFGA IAVAVLCSGF AGVYFEKVLK BACU016923/1-306 LCGGVVLVQW RPAQATGVVV EQNPLLGFGA IAVAVLCSGF AGVYFEKVLK 201 250 ENSTTRP00000008470/1-337 SSDTSLWVRN IQMYLSGIVV TLVGVYLSDG AEIKEKGFFY GYTYYVWLVI ENSP00000358565/1-337 SSDTSLWVRN IQMYLSGIIV TLAGVYLSDG AEIKEKGFFY GYTYYVWFVI ENSBTAP00000018680/1-337 SSDTSLWVRN IQMYLSGIVV TLVGVYLSDG AEIKEKGFFF GYTYYVWFVI bmy_17871T0/1-249 SSDTSLWVRN IQMYLSGIVV TLVGVYLSDG AEIKEKGFFY GYTYYVWLVI BACU016923/1-306 SSDTSLWVRN IQMYLSGIVV TLVGVYLSDG AEIKEKGFFY GYTYYVWLVI 251 300 ENSTTRP00000008470/1-337 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXLTFA ENSP00000358565/1-337 FLASVGGLYT SVVVKYTDNI MKGFSAAAAI VLSTIASVML FGLQITLTFA ENSBTAP00000018680/1-337 FLASVGGLYT SVVVKYTDNI MKGFSAAAAI VLSTIASVML FGLQITLTFA bmy_17871T0/1-249 FLASVGGLYT SVVVKYTDNI MKGFSAAAAI VLSTIASVML FGLQITLTFA BACU016923/1-306 FLASVGGLYT SVVVKYTDNI MKGFSAAAAI VLSTIASVML FGLQITLTFA 301 350 ENSTTRP00000008470/1-337 LGTLLVCVSI YLYGLPRQDT TSIQQGEPTS KERVSGV ENSP00000358565/1-337 LGTLLVCVSI YLYGLPRQDT TSIQQGETAS KERVIGV ENSBTAP00000018680/1-337 LGTLLVCVSI YLYGLPRQDT TSIQQGETDS KQRVIGV bmy_17871T0/1-249 LGTLLVCVSI YLYGLPRQDT TSIQQGEPTS KERVGGV BACU016923/1-306 LGTLLVCVSI YLYGLPRQDT TSIQQGEPTS KERVGGV