KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:22 2014 Check: 00 .. Name: ENSBTAP00000018702/1-468 Len: 1007 Check: 8142 Weight: 1.00 Name: ENSTTRP00000002892/1-969 Len: 1007 Check: 290 Weight: 1.00 Name: ENSP00000398789/1-957 Len: 1007 Check: 5612 Weight: 1.00 Name: bmy_01838T0/1-841 Len: 1007 Check: 6814 Weight: 1.00 Name: BACU000467/1-941 Len: 1007 Check: 1165 Weight: 1.00 // 1 50 ENSBTAP00000018702/1-468 ----MLTETS LSIWGWGSLG IVLSLITFGP FVIFYLAFYI LCFVGGGFVV ENSTTRP00000002892/1-969 VNIFKITETS LSIWGWGSLG IVLSLITFGP FVIFYLAFYI LCFVGGGFVV ENSP00000398789/1-957 ----MLTEAS LSIWGWGSLG IVLFLITFGP FVIFYLTFYI LCFVGGGLVV bmy_01838T0/1-841 ---------- ---------- ---------- ---------- ---------- BACU000467/1-941 ---------- ----MSGNI- ---------- ---------- ---VPRGFVV 51 100 ENSBTAP00000018702/1-468 TLLFGKTNSE KYLEQCEHSF LPPTSTGIPK CLEEMKREAR TIKIDRRLTG ENSTTRP00000002892/1-969 TLLFGKTNSE KYLEQCEHSF LPPTSTGIPK CLEEMKREAR TIKIDRRLTG ENSP00000398789/1-957 TLLFGKTNSE KYLEQCEHSF LPPTSPGVPK CLEEMKREAR TIKIDRRLTG bmy_01838T0/1-841 ---------- ---------- ---------- ----MKREAR TIRIDRRLTG BACU000467/1-941 TLLFGKTNSE KYLEQCEHSF LPPTSTGIPK CLEEMKREAR TIKIDRRLTG 101 150 ENSBTAP00000018702/1-468 ANIIDEPLQQ VIQFSLRDYV QYWYYTLSDD ESFLLEIRQT LQNALIQFAT ENSTTRP00000002892/1-969 ANIIDEPLQQ VIQFSLRDYV QYWYYTLSDD ESFLLEI-QT LQNALIXXXX ENSP00000398789/1-957 ANIIDEPLQQ VIQFSLRDYV QYWYYTLSDD ESFLLEIRQT LQNALIQFAT bmy_01838T0/1-841 ANIIDEPLQQ VIQFSLRDYV QYWYYTLSDD ESFLLEIRQA LQNALVQFAT BACU000467/1-941 ANIIDEPLQQ VIQFSLRDYV QYWYYTLSDD ESFLLEIRQA LQNALIQFAT 151 200 ENSBTAP00000018702/1-468 RSKEIDWQPY FTTRLVDDFG THLRVFRKAQ QKITEKDDQV KGTAEDLVDT ENSTTRP00000002892/1-969 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000398789/1-957 RSKEIDWQPY FTTRIVDDFG THLRVFRKAQ QKITEKDDQV KGTAEDLVDT bmy_01838T0/1-841 RSKEIDWQPY FTTRIVDDFG THLRVFRKAQ QKITEKDDQV KGTAEDLVDT BACU000467/1-941 RSKEIDWQPY FTTRIVDDFG THLRVFRKAQ QKITEKDDQI KGTAEDLVDT 201 250 ENSBTAP00000018702/1-468 FFEVEVEMEK DVCRDLVCTS PKDEEGFLRD LCEVLLYLLL PPGDFQNKIM ENSTTRP00000002892/1-969 XXXXXXXXXX XXXXXXXXXX XXXXXXFLRD LCEVLLYLLL PPGDFQNKIM ENSP00000398789/1-957 FFEVEVEMEK EVCRDLVCTS PKDEEGFLRD LCEVLLYLLL PPGDFQNKIM bmy_01838T0/1-841 FFEVEVEMEK DVCRDLVCTS PKDEEGFLFN LT-------- ---------- BACU000467/1-941 FFEVEVEMEK DVCRDLVCTS PKDEEGFLRD LCEVLLYLLL PPGDFQNKIM 251 300 ENSBTAP00000018702/1-468 RYFVREILAR GVLLPLINQL SDPDYINQYI IWMVLDMICL YEKMFNSLEK ENSTTRP00000002892/1-969 RYFVREILAR GILLPLINQL SDPDYINQYI IWMIRDSNCN YEAFMNIIKL ENSP00000398789/1-957 RYFVREILAR GILLPLINQL SDPDYINQYV IWMIRDSNCN YEAFMNIIKL bmy_01838T0/1-841 -FLRT----- ---------- ---------- ---IRDSNCN YEAFMNIIKL BACU000467/1-941 RYFVR----- ---------- ---------- ---IRDSNCN YEAFMNIIKL 301 350 ENSBTAP00000018702/1-468 TLMLGKREGR RRRGQQRMRW LDGI-TDSMD MNNNINQLSK LFHSQREDAG ENSTTRP00000002892/1-969 SDNIGELEAV RDKAAEELQY LRSLDTAGDD INTIKNQINS LLFVKKVCDS ENSP00000398789/1-957 SDNIGELEAV RDKAAEELQY LRSLDTAGDD INTIKNQINS LLFVKKVCDS bmy_01838T0/1-841 SDNIGELEAV RDKAAEELQY LRSLDTAGDD INTIKNQINS LLFVKKVCDS BACU000467/1-941 SDNIGELEAV RDKAAEELQY LRSLDTAGDD INTIKNQINS LLFVKKVCDS 351 400 ENSBTAP00000018702/1-468 RVDSLNSEPE INTVKLAANF GKLCTVPLDS ILVDNVALQF FMDYMQQTGG ENSTTRP00000002892/1-969 RIQRLQSGKE INTVKLAANF GKLCTVPLDS ILVDNVALQF FMDYMQQTGG ENSP00000398789/1-957 RIQRLQSGKE INTVKLAANF GKLCTVPLDS ILVDNVALQF FMDYMQQTGG bmy_01838T0/1-841 RIQRLQSGKE INTVKLAANF GKLCTVPLDS ILVDNVALQF FMDYMQQTGG BACU000467/1-941 RIQRLQSGKE INTVKLAANF GKLCTVPLDS ILVDNVALQF FMDYMQQTGG 401 450 ENSBTAP00000018702/1-468 QAHLFFWMTV EGYRVTAQQQ LEVLSSRQKD GKHQTNQTKG LLRAAAVGIY ENSTTRP00000002892/1-969 QAHLFFWMTV EGYRVTAQQQ LEVLSSRQKD GRHQTNQTKG LLRAAAVGIY ENSP00000398789/1-957 QAHLFFWMTV EGYRVTAQQQ LEVLLSRQRD GKHQTNQTKG LLRAAAVGIY bmy_01838T0/1-841 QAHLFFWMTV EGYRVTAQQQ LEVLSSRQKD GKHQTNQTKG LLRAAAVGIY BACU000467/1-941 QAHLFFWMTV EGYRVTAQQQ LEALSGRQKD GKHQTNQTKG LLRAAAVGIY 451 500 ENSBTAP00000018702/1-468 EQYLSE---- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 EQYLSE---- ---------- ---------- ---------- -KASPRVTVD ENSP00000398789/1-957 EQYLSE---- ---------- ---------- ---------- -KASPRVTVD bmy_01838T0/1-841 EQYLSE---- ---------- ---------- ---------- -KASPRVTVD BACU000467/1-941 EQYLSEKASP RVTVDDYLVA KLADTLNHED PTPEIFDDIQ RKASPRVTVD 501 550 ENSBTAP00000018702/1-468 ---------- ---------- ----KVRIY- ---------- ---------- ENSTTRP00000002892/1-969 DYLVAKLADT LNHEDPTPEI FDDIQRKVYE LMLRDERFYP SFRQNALYVR ENSP00000398789/1-957 DYLVAKLADT LNHEDPTPEI FDDIQRKVYE LMLRDERFYP SFRQNALYVR bmy_01838T0/1-841 DYLVAKLADT LNHEDPTPEI FDDIQRKVYE LMLRDERFYP SFRQNALYVR BACU000467/1-941 DYLVAKLADT LNHEDPTPEI FDDIQRKVYE LMLRDERFYP SFRQNALYVR 551 600 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 MLAELDMLKD PSFRGSDDGD GESFNGSPTG SINLSLDDLS NVSSDDSVQL ENSP00000398789/1-957 MLAELDMLKD PSFRGSDDGD GESFNGSPTG SINLSLDDLS NVSSDDSVQL bmy_01838T0/1-841 MLAELDMLKD PSFRGSDDGD GESFNGSPTG SINLSLDDLS NVSSDDSVQL BACU000467/1-941 MLAELDMLKD PSFRGSDDGD GESFNGSPTG SINLSLDDLS NVSSDDSVQL 601 650 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 HAYISDTVYA DYDPYAVAGV CNDHGKTYAL YAITVHRRSL NSEEMWKTYR ENSP00000398789/1-957 HAYISDT--- --------GV CNDHGKTYAL YAITVHRRNL NSEEMWKTYR bmy_01838T0/1-841 HAYISDTVYA DYDPYAVAGV CNDHGKTYAL YAITVHRRSL NNEEMWKTYR BACU000467/1-941 HAYISDTVYA DYDPYAVAGV CNDHGKTYAL YAITVHRRSL NSEEMWKTYR 651 700 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 RYSDFHDFHM RITEQFENLS SILKLPGKKT FNNMDRDFLE KRKKDLNAYL ENSP00000398789/1-957 RYSDFHDFHM RITEQFESLS SILKLPGKKT FNNMDRDFLE KRKKDLNAYL bmy_01838T0/1-841 RYSDFHDFHM RITEQFENLS SILKLPGKKT FNNMDRDFLE KRKKDLNAYL BACU000467/1-941 RYSDFHDFHM RITEQFENLS SILKLPGKKT FNNMDRDFLE KRKKDLNAYL 701 750 ENSBTAP00000018702/1-468 ---------- ---------F DLFE------ ---------D TF-------- ENSTTRP00000002892/1-969 QLLLTPEMMK ASPALAHYVY DFLE-KAYSK GKG-FARXMD TFVNPLRNSM ENSP00000398789/1-957 QLLLAPEMMK ASPALAHYVY DFLENKAYSK GKGDFARKMD TFVNPLRNSM bmy_01838T0/1-841 QLLLTPEMMK ASPALAHYVY DFLENKAYSK GKGDFARKMD TFVNPLRNSM BACU000467/1-941 QLLLTPEMMK ASPALAHYVY DFLENKAYSK GKGDFARKMD TFVNPLRNSM 751 800 ENSBTAP00000018702/1-468 ---------- ---------- ---------- --------SF LL-------- ENSTTRP00000002892/1-969 RNVSNAVKSL PDSFAEGMTK MSDNMGKMSE RLGQDIRQSF FKVPPLIPKT ENSP00000398789/1-957 RNVSNAVKSL PDSLAEGMTK MSDNMGKMSE RLGQDIKQSF FKVPPLIPKT bmy_01838T0/1-841 RNVSNAVKSL PDSLAEGMTK MSDNMGKMSE RLGQDIRQSF FKVPPLIPKT BACU000467/1-941 RNVSNAVKSL PDSLAEGMTK MSDNMGKMSE RLGQDIRQSF FKVPPLIPKT 801 850 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 DSDPEHCRVS AQLDDTVDDN IPLRVMLLLM DEVFDLKERN QWLRRNIKNL ENSP00000398789/1-957 DSDPEHRRVS AQLDDNVDDN IPLRVMLLLM DEVFDLKERN QWLRRNIKNL bmy_01838T0/1-841 DSDPEHCRVS AQLDDTVDDN IPLRVMLLLM DEVFDLKERN QWLRRNIKNL BACU000467/1-941 DSDPEHCRVS AQLDDTVDDN IPLRVMLLLM DEVFDLKERN QWLRRNIKNL 851 900 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 LQQLIRATYG DTINRKIVDH VDWMTSPEQV ADLVKRFRDA FWPNGILAET ENSP00000398789/1-957 LQQLIRATYG DTINRKIVDH VDWMTSPEQV ADSVKRFRDA FWPNGILAEA bmy_01838T0/1-841 LQQLIRATYG DTINRKIVDH VDWMTSPEQV ADLVKRFRDA FWPNGILAET BACU000467/1-941 LQQLIRATYG DTINRKIVDH VDWMTSPEQV ADLVKRFRDA FWPNGILAET 901 950 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 VPCRDKAIRM RTRVAGKTKL LSIMPDELKH IIGAETTRKG ILRVFEMFQH ENSP00000398789/1-957 VPCRDKSIRM RTRVAGKTKL LAIMPDELKH IIGAETTRKG ILRVFEMFQH bmy_01838T0/1-841 VPCRDKAIRM RTRVAGKTKL LSIMPDELKH IIGAETTRKG ILRVFEMFQH BACU000467/1-941 VPCRDKAIRM RTRVAGKTKL LSIMPDELKH IIGAETTRKG ILRVFEMFQH 951 1000 ENSBTAP00000018702/1-468 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002892/1-969 NQLNRRMVYV FLEGFLESLF PQYKFRELFN RLHSRSKQMQ KYKQKLHTTQ ENSP00000398789/1-957 NQLNRRMVYV FLEGFLETLF PQYKFRELFN KLHSRSKQMQ KYKQKLQTTQ bmy_01838T0/1-841 NQLNRRMVYV FLEGFLETLF PQYKFRELFN RLHSRSKQMQ KYKQKLQTTQ BACU000467/1-941 NQLNRRMVYV FLEGFLETLF PQYKFRELFN RLHSRSKQMQ KYKQKLQTTQ 1001 1050 ENSBTAP00000018702/1-468 ------- ENSTTRP00000002892/1-969 APSLQKR ENSP00000398789/1-957 APSLQKR bmy_01838T0/1-841 APSLQKR BACU000467/1-941 APSLQKR