KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:22 2014 Check: 00 .. Name: bmy_07051T0/1-1043 Len: 1074 Check: 8782 Weight: 1.00 Name: ENSTTRP00000002030/1-811 Len: 1074 Check: 7658 Weight: 1.00 Name: ENSP00000410294/1-822 Len: 1074 Check: 9566 Weight: 1.00 Name: BACU004712/1-838 Len: 1074 Check: 8161 Weight: 1.00 Name: ENSBTAP00000018708/1-840 Len: 1074 Check: 1555 Weight: 1.00 // 1 50 bmy_07051T0/1-1043 ----MLTAFP PESELSGVCC VRSGVALTFS GSGPELGDCG IHKLGTLEVN ENSTTRP00000002030/1-811 ---------- ---------- --------LV ---------- VVTMAT-SLA ENSP00000410294/1-822 ---------- ---------M VSWGRFICLV ---------- VVTMATLSLA BACU004712/1-838 MGLTSTWRYG RGRGIGTVTM VSWGRFVGLV ---------- VVTMATLSLA ENSBTAP00000018708/1-840 MGLTSTWRYG RGQGIGTVTM VSWGRFLCLV ---------- VVTMATLSLA 51 100 bmy_07051T0/1-1043 F--FSRLDEV DTHPRGNSET NQTQKSREKG EEGTVEIGSC EERLPVKCPV ENSTTRP00000002030/1-811 RP-FNLVEDT TVEPEEPSTK YQISQP---- ---EVYVAAP RESLELRCLL ENSP00000410294/1-822 RPSFSLVEDT TLEPEEPPTK YQISQP---- ---EVYVAAP GESLEVRCLL BACU004712/1-838 RPSFNLVEDT TVEPEEPSTK YQISQP---- ---EVYVAAP RESLELRCLL ENSBTAP00000018708/1-840 RPSFNLVDDT TVEPEEPPTK YQISQP---- ---EVYVAAP RESLELRCLL 101 150 bmy_07051T0/1-1043 TLGFIDITSG WFGQPVNQSI KFPSRVQIGR CQRLRQQQKW LQGQQRLSQH ENSTTRP00000002030/1-811 RDAAM---IS W--------- -TKDGVHLGP NNRTVLIGEY LQIKGATPRD ENSP00000410294/1-822 KDAAV---IS W--------- -TKDGVHLGP NNRTVLIGEY LQIKGATPRD BACU004712/1-838 RDAAM---IS W--------- -TKDGVHLGP NNRTVLIGEY LQIKGASPRD ENSBTAP00000018708/1-840 RDAAM---IS W--------- -TKDGVHLGP NNRTVLIGEY LQIKGATPRD 151 200 bmy_07051T0/1-1043 LGSRAHRRLK ALLRAVHAHR GSVQMGLTST WRYGRGRGIG TVTMVSWGRF ENSTTRP00000002030/1-811 SG-------- --LYACTAAR NVD----SET VYF------- ---------- ENSP00000410294/1-822 SG-------- --LYACTASR TVD----SET WYF------- ---------- BACU004712/1-838 SG-------- --LYACTAAR NVD----SET VYF------- ---------- ENSBTAP00000018708/1-840 SG-------- --LYACTAAR NVD----SET VYF------- ---------- 201 250 bmy_07051T0/1-1043 VGLVVVTMAT LSLARPSFNL VEDTTVEPED AISSGDDEDD TDGSEDFVSE ENSTTRP00000002030/1-811 ---------- ---------- ----MVNVTD AISSGDDEDD TDGSEDFVSE ENSP00000410294/1-822 ---------- ---------- ----MVNVTD AISSGDDEDD TDGAEDFVSE BACU004712/1-838 ---------- ---------- ----MVNVTD AISSGDDEDD TDGSEDFVSE ENSBTAP00000018708/1-840 ---------- ---------- ----MVNVTD AISSGDDEDD ADGSEDFVSE 251 300 bmy_07051T0/1-1043 NSNSKRAPYW TNTEKMEKRL HAVPAANTVK FRCPAGGNPT PTMRWLKNGK ENSTTRP00000002030/1-811 NSNSKRAPYW TNTEKMEKRL HAVPAANTVK FRCPAGGNPT PTMRWLKNGK ENSP00000410294/1-822 NSNNKRAPYW TNTEKMEKRL HAVPAANTVK FRCPAGGNPM PTMRWLKNGK BACU004712/1-838 NSNSKRAPYW TNTEKMEKRL HAVPAANTVK FRCPAGGNPA PTMRWLKNGK ENSBTAP00000018708/1-840 NSNSKRAPYW TNTEKMEKRL HAVPAANTVK FRCPAGGNPT PTMRWLKNGK 301 350 bmy_07051T0/1-1043 EFKQEHRIGG YKVRNQHWSL IMESVVPSDK GNYTCVVEND YGSINHTYHL ENSTTRP00000002030/1-811 EFKQEHRIGG YKVRNQHWSL IMESVVPSDK GNYTCVVEND YGSINHTYHL ENSP00000410294/1-822 EFKQEHRIGG YKVRNQHWSL IMESVVPSDK GNYTCVVENE YGSINHTYHL BACU004712/1-838 EFKQEHRIGG YKVRNQHWSL IMESVVPSDK GNYTCVVEND YGSINHTYHL ENSBTAP00000018708/1-840 EFKQEHRIGG YKVRNQHWSL IMESVVPSDK GNYTCVVEND YGSINHTYHL 351 400 bmy_07051T0/1-1043 DVVGGHGRPV THDVVSSSLS FLNKYSFHKG XAPAVSFEVV SVLRRAVVLF ENSTTRP00000002030/1-811 DVV------- ---------- ---------- ---------- ---------- ENSP00000410294/1-822 DVV------- ---------- ---------- ---------- ---------- BACU004712/1-838 DVV------- ---------- ---------- ---------- ---------- ENSBTAP00000018708/1-840 DVV------- ---------- ---------- ---------- ---------- 401 450 bmy_07051T0/1-1043 QRSQPAGSRP FWLEFTVSLL DNTTYLFVSP PAPRPVLSLL PLPPLSPPER ENSTTRP00000002030/1-811 ---------- ---------- ---------- ---------- --------ER ENSP00000410294/1-822 ---------- ---------- ---------- ---------- --------ER BACU004712/1-838 ---------- ---------- ---------- ---------- --------ER ENSBTAP00000018708/1-840 ---------- ---------- ---------- ---------- --------ER 451 500 bmy_07051T0/1-1043 SPHRPILQAG LPANASAVVG GDVEFVCKVY SDAQPHIQWI KHVEKNGSKY ENSTTRP00000002030/1-811 SPHRPILQAG LPANASAVVG GDVEFVCKVY SDAQPHIQWI KHVEKNGSKY ENSP00000410294/1-822 SPHRPILQAG LPANASTVVG GDVEFVCKVY SDAQPHIQWI KHVEKNGSKY BACU004712/1-838 SPHRPILQAG LPANASAVVG GDVEFVCKVY SDAQPHIQWI KHVEKNGSKY ENSBTAP00000018708/1-840 SPHRPILQAG LPANASTVVG GDVEFVCKVY SDAQPHIQWI KHVEKNGSKY 501 550 bmy_07051T0/1-1043 GPDGLPYLKV LKAAGVNTTD KEIEVLYIRN VTFEDAGEYT CLA------- ENSTTRP00000002030/1-811 GPDGLPYLKV LKHSGINSSN AEVLALF--N VTEADAGEYI CKVSNYIGQA ENSP00000410294/1-822 GPDGLPYLKV LKHSGINSSN AEVLALF--N VTEADAGEYI CKVSNYIGQA BACU004712/1-838 GPDGLPYLKV LKAAGVNTTD KEIEVLYIRN VTFEDAGEYT CLAGNSIGIS ENSBTAP00000018708/1-840 GPDGLPYLKV LKAAGVNTTD KEIEVLYIRN VTFEDAGEYT CLAGNSIGIS 551 600 bmy_07051T0/1-1043 ---------- ---APVREKE ITASPEYLEI AIYCIGVFLI ACMVVGVIVC ENSTTRP00000002030/1-811 NQSAWLTVLP KQQAPVREKE ITASPEYLEI AIYCIGVFLI ACMVVGVIVC ENSP00000410294/1-822 NQSAWLTVLP KQQAPGREKE ITASPDYLEI AIYCIGVFLI ACMVVTVILC BACU004712/1-838 FHSAWLTVLP ---APVREKE ITASPEYLEI AIYCIGVFLI ACMVVGVIVC ENSBTAP00000018708/1-840 FHSAWLTVLP ---APVREKE IPASPDYLEI AIYCIGVFFI ACMVVTVILC 601 650 bmy_07051T0/1-1043 RMKNTTKKPD FSSQPAVHKL TKRIPLRRQ- -VSAESSSSM NSNTPLVRIT ENSTTRP00000002030/1-811 RMKNTTKKPD FSSQPAVHKL TKRIPLRRQV TVSAESSSSM NSNTPLVRIT ENSP00000410294/1-822 RMKNTTKKPD FSSQPAVHKL TKRIPLRRQV TVSAESSSSM NSNTPLVRIT BACU004712/1-838 RMKNTTKKPD FSSQPAVHKL TKRIPLRRQ- -VSAESSSSM NSNTPLVRIT ENSBTAP00000018708/1-840 RMRNTTKKPD FSSQPAVHKL TKRIPLRRQ- -VSAESSSSM NSNTPLVRIT 651 700 bmy_07051T0/1-1043 TRLSSTADTP MLAGVSEYEL PEDPKWEFPR DKLTLGKPLG EGCFGQVVMA ENSTTRP00000002030/1-811 TRLSSTADTP MLAGVSEYEL PEDPKWEFPR DKLTLGKPLG EGCFGQVVMA ENSP00000410294/1-822 TRLSSTADTP MLAGVSEYEL PEDPKWEFPR DKLTLGKPLG EGCFGQVVMA BACU004712/1-838 TRLSSTADTP MLAGVSEYEL PEDPKWEFPR DKLTLGKPLG EGCFGQVVMA ENSBTAP00000018708/1-840 TRLSSTADTP MLAGVSEYEL PEDPKWEFPR DKLTLGKPLG EGCFGQVVMA 701 750 bmy_07051T0/1-1043 EAVGIDKEKP KEAVTVAVKM LKDDATEKDL SDLVSEMEMM KMIGKHKNII ENSTTRP00000002030/1-811 EAVGIDKEKP KEAVTVAVKM LKXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000410294/1-822 EAVGIDKDKP KEAVTVAVKM LKDDATEKDL SDLVSEMEMM KMIGKHKNII BACU004712/1-838 EAVGIDKEKP KEAVTVAVKM LKDDATEKDL SDLVSEMEMM KMIGKHKNII ENSBTAP00000018708/1-840 EAVGIDKEKP KEAVTVAVKM LKDDATEKDL SDLVSEMEMM KMIGKHKNII 751 800 bmy_07051T0/1-1043 NLLGACTQD- -GPLYVIVEY ASKGNLREYL RARRPPGMEY SYDINRVPEE ENSTTRP00000002030/1-811 XXXXXXXXX- -XPLYVIVEY ASKGNLREYL RARRPPGMEY SYDITRVPEE ENSP00000410294/1-822 NLLGACTQD- -GPLYVIVEY ASKGNLREYL RARRPPGMEY SYDINRVPEE BACU004712/1-838 NLLGACTQD- -GPLYVIVEY ASKGNLREYL RVRRPPGMEY SYDINRVPEE ENSBTAP00000018708/1-840 NLLGACTQDA TGPLYVIVEY ASKGNLREYL RARRPPGMEY SYDINRVPEE 801 850 bmy_07051T0/1-1043 QMTFKDLVSC TYQLARGMEY LASQKCIHRD LAARNVLVTE NNVMKIADFG ENSTTRP00000002030/1-811 QMTFKDLVSC TYQLARGMEY LASQKCIHRD LAARNVLVTE NNVMKIADFG ENSP00000410294/1-822 QMTFKDLVSC TYQLARGMEY LASQKCIHRD LAARNVLVTE NNVMKIADFG BACU004712/1-838 QMTFKDLVSC TYQLARGMEY LASQKCIHRD LAARNVLVTE NNVMKIADFG ENSBTAP00000018708/1-840 QMAFKDLVSC TYQLARGMEY LASQKCIHRD LAARNVLVTE NNVMKIADFG 851 900 bmy_07051T0/1-1043 LARDINNIDY YKKTTNGRLP VKWMAPEALF DRVYTHQSDV WSFGVLMWEI ENSTTRP00000002030/1-811 LARDINNIDY YKKTTNGRLP VKWMAPEALF DRVYTHQSDV WSFGVLMWEI ENSP00000410294/1-822 LARDINNIDY YKKTTNGRLP VKWMAPEALF DRVYTHQSDV WSFGVLMWEI BACU004712/1-838 LARDINNIDY YKKTTNGRLP VKWMAPEALF DRVYTHQSDV WSFGVLMWEI ENSBTAP00000018708/1-840 LARDINNIDY YKKTTNGRLP VKWMAPEALF DRVYTHQSDV WSFGVLMWEI 901 950 bmy_07051T0/1-1043 FTLGGSPYPG IPVEELFKLL KEGHRMDKPA NCTNELYMMM RDCWHAVPSQ ENSTTRP00000002030/1-811 FTLGGSPYPG IPVEELFKLL KEGHRMDKPA NCTNELYMMM RDCWHAVPSQ ENSP00000410294/1-822 FTLGGSPYPG IPVEELFKLL KEGHRMDKPA NCTNELYMMM RDCWHAVPSQ BACU004712/1-838 FTLGGSPYPG IPVEELFKLL KEGHRMDKPA NCTNELYMMM RDCWHAVPSQ ENSBTAP00000018708/1-840 FTLGGSPYPG IPVEELFKLL KEGHRMDKPA NCTNELYMMM RDCWHAVPSQ 951 1000 bmy_07051T0/1-1043 RPTFKQLVED LDRILTLTTN ENYILRVLTH KTRDRGPH-P RLPLTVACGW ENSTTRP00000002030/1-811 RPTFKQLVED LDRILTLTTN EEYL--DLSQ PLEQYSPSYP DTRSSCSSG- ENSP00000410294/1-822 RPTFKQLVED LDRILTLTTN EEYL--DLSQ PLEQYSPSYP DTRSSCSSG- BACU004712/1-838 RPTFKQLVED LDRILTLTTN EEYL--DLSQ PLEQYSPSYP DTRSSCSSG- ENSBTAP00000018708/1-840 RPTFKQLVED LDRILTLTTN EEYL--DLSQ LLEQYSPSYP DTRSSCSSG- 1001 1050 bmy_07051T0/1-1043 WVQGANTWTS VSLLNSIHLV TLTQGVLALR EMILFSLRTP CLTNPAFLSI ENSTTRP00000002030/1-811 ---------- ---------- --DDSVFSPD PMPY----EP CLPQYPHRNG ENSP00000410294/1-822 ---------- ---------- --DDSVFSPD PMPY----EP CLPQYPHING BACU004712/1-838 ---------- ---------- --DDSVFSPD PMPY----EP CLPQYPHRNG ENSBTAP00000018708/1-840 ---------- ---------- --DDSVFSPD PMPY----EP CLPQYPHRNG 1051 1100 bmy_07051T0/1-1043 HIETAVLKHE WACPPSANRA APGT ENSTTRP00000002030/1-811 SVKT------ ---------- ---- ENSP00000410294/1-822 SVKT------ ---------- ---- BACU004712/1-838 SVKT------ ---------- ---- ENSBTAP00000018708/1-840 SVKT------ ---------- ----