KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:29 2014 Check: 00 .. Name: bmy_20576T0/1-234 Len: 378 Check: 8228 Weight: 1.00 Name: ENSBTAP00000018746/1-339 Len: 378 Check: 3152 Weight: 1.00 Name: BACU005444/1-355 Len: 378 Check: 271 Weight: 1.00 Name: ENSP00000359890/1-354 Len: 378 Check: 363 Weight: 1.00 Name: ENSTTRP00000015967/1-353 Len: 378 Check: 8492 Weight: 1.00 // 1 50 bmy_20576T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018746/1-339 MTAFSIALVR DAKWLTLEVC REFQRGTCSR ADADCKFAHP PRICHVENGR BACU005444/1-355 MTAVNVALVR DTKWLTLEVC REFQRGNCSR ADADCKFAHP PRVCHVENGR ENSP00000359890/1-354 MTAVNVALIR DTKWLTLEVC REFQRGTCSR ADADCKFAHP PRVCHVENGR ENSTTRP00000015967/1-353 MTAVNVALVR DTKWLTLEVC REFQRGTCSR ADADCKFAHP PRVCHVENGR 51 100 bmy_20576T0/1-234 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018746/1-339 VVACFDSLKG RCARENCKYL HPPPHLKTQL EINGRNNLIQ QKSAAAMFAQ BACU005444/1-355 VMACFDSLKG RCARENCKYL HPPPHLKTQL EINGRNNLIQ QKTAAAMFAQ ENSP00000359890/1-354 VVACFDSLKG RCTRENCKYL HPPPHLKTQL EINGRNNLIQ QKTAAAMFAQ ENSTTRP00000015967/1-353 VMACFDSLKG RCARENCKYL HPPPHLKTQL EINGRNNLIQ QKTAAAMFAQ 101 150 bmy_20576T0/1-234 ---------- ---------- --------MA FNPYLP-HPG MGLVPAELLP ENSBTAP00000018746/1-339 HMQFMFQNAQ MPSVNSFPVN PAIAANPAMA YNPYLPHHPG MGLVPAELVQ BACU005444/1-355 QMQLMLQNAQ MSSHNSFPVT PSLAPNPAMA FNPYLP-HPG MGLVHAELLP ENSP00000359890/1-354 QMQLMLQNAQ MSSLGSFPMT PSIPANPPMA FNPYIP-HPG MGLVPAELVP ENSTTRP00000015967/1-353 QMQFMLQNGQ MPSLTSFPVT PSLAANPAMA FNPYLP-HPG MGLVPAELLP 151 200 bmy_20576T0/1-234 NAPVLISGNP PLPLPGPPGP KPMRSDKLEV CREFQRGNCT RGESDCRYAH ENSBTAP00000018746/1-339 NAPVLISGNP PLPLPGPVGP KPIRSDKLEV CREFQRGNCT RGENDCRYAH BACU005444/1-355 NAPVLISGNP PLPLPGPPGP KPMRTDKLEV CREFQRGNCT RGESDCRYAH ENSP00000359890/1-354 NTPVLIPGNP PLAMPGAVGP KLMRSDKLEV CREFQRGNCT RGENDCRYAH ENSTTRP00000015967/1-353 NAPVLISGNP PLPLPGAPGP KPMRSDKLEV CREFQRANCT RGENDCRYAH 201 250 bmy_20576T0/1-234 PTDVSMIDAS DNTVTICMDY IKGRCSREKC KYFHPPPHLQ AKLKAAHHQM ENSBTAP00000018746/1-339 PTDVSMIETS DNTVTICMDY IKGRCSREKC KYFHPPAHLQ AKLKAAHYQM BACU005444/1-355 PTDVSVIDAS DNTVTICMDY IKGRCSREKC KYFHPPPHLQ AKLRAAHHQM ENSP00000359890/1-354 PTDASMIEAS DNTVTICMDY IKGRCSREKC KYFHPPAHLQ ARLKAAHHQM ENSTTRP00000015967/1-353 PTDVSMIEAS DNTVTICMDY IKGRCSREKC KYFHPPAHLQ ARLKAAHHQM 251 300 bmy_20576T0/1-234 NHSAATAMAL QPGAFQLIPK RSALEKTSGA TPVFNPSVFH CQQALTNLQL ENSBTAP00000018746/1-339 NHSAATAMAL P--------- ---------N VPMPQPQ--- ---------- BACU005444/1-355 NHSAATAMAL QPGAFQLIPK RSALEKTSGA TPVFNPRVFL CQQALTNLQL ENSP00000359890/1-354 NHSAASAMAL QPGTLQLIPK RSALEKPNGA TPVFNPTVFH CQQALTNLQL ENSTTRP00000015967/1-353 NHSAATAMAL QPGALQLIPK RSALEKTNGA TPVFNPSVFH CQQALANLQL 301 350 bmy_20576T0/1-234 PQPAFIPAVE ILNNRVMEYQ NLSVRTSIWP FYIYSLPNDN SDMLDLESE- ENSBTAP00000018746/1-339 PQPQFIPTGP IL-------- CMAPASSVVP MMHSAAPTTM SAAPPPATSI BACU005444/1-355 PQPAFIPAGP IL-------- CMVPASSI-- ---GRFCTKI LNFLQSEKKC ENSP00000359890/1-354 PQPAFIPAGP IL-------- CMAPASNIVP MMHGATPTTV SAATTPATSV ENSTTRP00000015967/1-353 PQPAFIPA-P IL-------- CMVPASSIVP MMHGATPTTV SAATPPATSV 351 400 bmy_20576T0/1-234 --SKTGQGQR --------SR Y----NEC ENSBTAP00000018746/1-339 PFVATAPGNQ IPPLSVDELN NSMFVTQM BACU005444/1-355 -FSVVTMKET --------SN WMMWLDIF ENSP00000359890/1-354 PFAAPTTGNQ --------LK F------- ENSTTRP00000015967/1-353 PFAATATINQ --------LK F-------