KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:31 2014 Check: 00 .. Name: BACU016647/1-123 Len: 640 Check: 2513 Weight: 1.00 Name: ENSP00000300976/1-615 Len: 640 Check: 7378 Weight: 1.00 Name: ENSBTAP00000018754/1-608 Len: 640 Check: 3510 Weight: 1.00 Name: bmy_02639T0/1-587 Len: 640 Check: 5066 Weight: 1.00 Name: ENSTTRP00000009956/1-613 Len: 640 Check: 253 Weight: 1.00 // 1 50 BACU016647/1-123 MQGVEWTGFG DQSEVASPVS SPRDIHSFDV KPVLDDVTAL GPHFPDCVPD ENSP00000300976/1-615 MAESGGSSGG AGGGGAFGAG P--------- ---------- GPERPN---- ENSBTAP00000018754/1-608 WVESRWLHGR SAAC------ ---------- ---------- PPLLPH---- bmy_02639T0/1-587 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009956/1-613 MAASGGSGGA GGGGLRAGP- ---------- ---------- GPERPN---- 51 100 BACU016647/1-123 EGSMADKNGA LKCTFSAPGH STSLLQGLAA LRAQGQLLDV VLTINRETFH ENSP00000300976/1-615 --STADKNGA LKCTFSAPSH STSLLQGLAT LRAQGQLLDV VLTINREAFP ENSBTAP00000018754/1-608 --SMADKNGA LKCTFSAPGH STSLLQGLAA LRAQGQLLDV VLTVNRETFH bmy_02639T0/1-587 ---MADKNGA LKCTFSAPGH STSLLQGLAA LRAQGQLLDV VLTINRETFH ENSTTRP00000009956/1-613 --SMADKNGA LKCTFSAPGH STSLLQGLAA LRAQGQLLDV VLTINQETFH 101 150 BACU016647/1-123 AHKVVLAACS DYFR------ ---------- ---------- ---------- ENSP00000300976/1-615 AHKVVLAACS DYFRAMFTGG MREASQDVIE LKGVSARGLR HIIDFAYSAE ENSBTAP00000018754/1-608 AHKVVLAACS DYFRAMFTGG MREASQDVIE LKGVSARGLR HIIDFAYSAE bmy_02639T0/1-587 AHKVVLAACS DYFRAMFTGG MRETSQDVIE LKGVSARGLR HIIDFAYSAE ENSTTRP00000009956/1-613 AHKVVLAACS DYFRAMFTGG MRETSQDVIE LKGVSARGLQ HIIDFAYSAE 151 200 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 VTLDLDCVQD VLGAAVFLQM LPVVELCEEF LKAAMSVETC LNIGQMATTF ENSBTAP00000018754/1-608 VTLDLDCVQD VLGAAVFLQM LPVVELCEEF LKAAMSVETC LHIGHMATTF bmy_02639T0/1-587 VTLDLDCVQD VLGAAVFLQM LPVVELCEEF LKAAMSVETC LNIGHMATTF ENSTTRP00000009956/1-613 VTLDLDCVQD VLGAAVFLQM LPVVELCEEF LKAAMSVETC LNIGHMATTF 201 250 BACU016647/1-123 ---------- ---------- ---------- ---------- NRLSAA---- ENSP00000300976/1-615 SLASLRESVD AFTFRHFLQI AEEEDFLRLP LERLVFFLQS NRLQSCAEID ENSBTAP00000018754/1-608 SLASLKESVD AFTFRHFLQI AEEEDFLHLP LERLVFFLQS NRLQSCAEID bmy_02639T0/1-587 SLASLKESVD TFTFRHFLQI AEEEDFLHLP LERLVFFLKS NRLQSCAEID ENSTTRP00000009956/1-613 SLASLKESVD TFTFRHFLQI AEEEDFLHLP LERLVFFLKS NRLQSCAEID 251 300 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 LFRAAVRWLQ HDPARRPRAS HVLCHIRFPL MQSSELVDSV QTLDIMVEDV ENSBTAP00000018754/1-608 LFRAAVRWLQ HDPARRLRAS HVLCHIRFPL MRSSDLVDSV QTLDIMVEDV bmy_02639T0/1-587 LFRVAVRWLQ HDPARRLRAS HVLCHIRFPL MRSSDLVDSV QTLDIMVEDV ENSTTRP00000009956/1-613 LFRVAVRWLQ HDPARRLRAS HVLCHIRFPL MRSSDLVDSV QTLDIMVEDV 301 350 BACU016647/1-123 LCK------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 LCRQYLLEAF NYQVLPFRQH EMQSPRTAVR SDVPSLVTFG GTPYTDSDRS ENSBTAP00000018754/1-608 LCRQYLLEAF SYQVLPFRQH EMQSSRTAVR SDVPSLVAFG GTPYTDSDRS bmy_02639T0/1-587 LCRQYLLEAF NYQVLPFRQH EMQSPRTAVR SDVPSLVAFG GTPYTDSDRS ENSTTRP00000009956/1-613 LCRQYLLEAF NYQVLPFRQH EMQSPRTAVR SDVPSLVAFG GTPYTDSDRS 351 400 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 VSSKVYQLPE PGARHFRELT EMEVGCSHTC VAVLDNFVYV AGGQHLQYRS ENSBTAP00000018754/1-608 VSSKVYQLPE PGARHFRELT EMEVGCSHTC VAVLDNFVYV AGGQHLQYRS bmy_02639T0/1-587 VSSKVYQLPE PGARHFRELT EMEVGCSHTC VAVLDNFVYV AGGQHLQYRS ENSTTRP00000009956/1-613 VSSKVYQLPE PGSRHFRELT EMEVGCSHTC VAVLDNFVYV AGGQHLQYRS 401 450 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 GEGAVDACYR YDPHLNRWLR LQAMQESRIQ FQLNVLCGMV YATGGRNRAG ENSBTAP00000018754/1-608 GEGAVDACYR YDPHLNRWLR LQAMQESRIQ FQLNVLCGMV YATGGRNRAG bmy_02639T0/1-587 GEGAVDSCYR YDPHLNRWLR LQAMQESRIQ FQLNVLCGMV YATGGRNRAG ENSTTRP00000009956/1-613 GEGAVDSCYR YDPHLNRWLR LQAMQESRIQ FQLNVLCGMV YATGGRNRAG 451 500 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 SLASVERYCP RRNEWGYACS LKRRTWGHAG AASGGRLYIS GGYGISVEDK ENSBTAP00000018754/1-608 SLASVERYCP RRNEWGYACS LKRRTWGHAG ASVGGRLYIS GGYGISVEDK bmy_02639T0/1-587 SLASVERYCP RRNEWGYACS LKRRTWGHAG ASSGGRLYIS GGYGISVEDK ENSTTRP00000009956/1-613 SLASVERYCP RRNEWGYACS LKRRTWGHAG ASSGGRLYIS GGYGISVEDK 501 550 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 KALHCYDPVA DQWEFKAPMS EPRVLHAMVG AGGRIYALGG RMDHVDRCFD ENSBTAP00000018754/1-608 KALHCYDPEA DQWEFKAPMS EPRVLHAMVG AGGRIYALGG RMDHVDRCFD bmy_02639T0/1-587 KALHCYDPET DQWEFKAPMS EPRVLHAMVG AGGRIYALGG RMDHVDRCFD ENSTTRP00000009956/1-613 KALHCYDPEA DQWEFKAPMS EPRVLHAMVG AGGRIYALGG RMDHVDRCFD 551 600 BACU016647/1-123 ---------- ---------- ---------- ---------- ---------- ENSP00000300976/1-615 VLAVEYYVPE TDQWTSVSPM RAGQSEAGCC LLERKIYIVG GYNWRLNNVT ENSBTAP00000018754/1-608 VLAVEYYVPE TDQWTSVTPM RAGQSEAGCC LLDRKIYIVG GYNWRLNNVT bmy_02639T0/1-587 VLAVEYYVPE TDQWTSVSPM RAGQSEAGCC LLDRKIYIVG GYNWRLNNVT ENSTTRP00000009956/1-613 VLAVEYYVPE TDQWTSVSPM RAGQSEAGCC LLDRKIYIVG GYNWRLNNVT 601 650 BACU016647/1-123 ---------- ---------- ---------- ---------- ENSP00000300976/1-615 GIVQVYNTDT DEWERDLHFP ESFAGIACAP VLLPRAGTRR ENSBTAP00000018754/1-608 GLVQVYNTET DEWERDLHFP ESFAGIACAP VLLPRAGPRR bmy_02639T0/1-587 GIVQVYNTET DEWERDLHFP ESFAGIACAP VLLPRARTRR ENSTTRP00000009956/1-613 GIVQVYNTET DEWERDLHFP ESFAGIACAP VLLPRARTRR