KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:34 2014 Check: 00 .. Name: bmy_15474T0/1-581 Len: 987 Check: 828 Weight: 1.00 Name: ENSP00000425487/1-924 Len: 987 Check: 5479 Weight: 1.00 Name: BACU013544/1-939 Len: 987 Check: 390 Weight: 1.00 Name: ENSTTRP00000010679/1-919 Len: 987 Check: 8827 Weight: 1.00 Name: ENSBTAP00000018761/1-714 Len: 987 Check: 3394 Weight: 1.00 // 1 50 bmy_15474T0/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000425487/1-924 MEIKEEGASE EGQHFLPTAQ ANDPGDCQFT SIQKTPNEPQ LEFILACKDL BACU013544/1-939 MEIKEEGASE EGQNFLPTPQ ANDTGDFQFT SIQTTPDEPQ LEFILACKDL ENSTTRP00000010679/1-919 MEIKEEGASE EGQNFLPTLQ ANDTGEFQFT SIQKTPNEPQ LEXXXXCKDL ENSBTAP00000018761/1-714 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_15474T0/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000425487/1-924 VAPVRDRKLN TLVQISVIHP VEQSLTRYSS TEIVEGTRDP LFLTGVTFPS BACU013544/1-939 VAPVRDRKLN TLVQISVIHP AEQGLTRYSS TEIVEGTRDP LFLTGVTFPS ENSTTRP00000010679/1-919 VAPVRDRKLN TLVQISVIHP AEQGLTRYSS TEIVEGTRDP LFLTGVTFPS ENSBTAP00000018761/1-714 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_15474T0/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000425487/1-924 EYPIYEETKI KLTVYDVKDK SHDTVRTSVL PEHKDPPPEV GRSFLGYASF BACU013544/1-939 EYPIYEETKI KLTVYDVKDK SYDTVRTSVL PEHKDPPPEV GRSFLGYASF ENSTTRP00000010679/1-919 EYPIYEETKI KLTVYDVKDK SYDTVRTSVL PEHKDPPPEV GRSFLGYASF ENSBTAP00000018761/1-714 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_15474T0/1-581 ---------- ---------- --MVVFGNYS I--------- ---------- ENSP00000425487/1-924 KVGELLKSKE QLLVLSLRTS DGGKVVGTIE VSVVKMGEIE DGEADHITTD BACU013544/1-939 KVGDLLKSKE QVLTLSLRTS DGGKVVGTIQ VSVVKMGEIE DGEADHITTD ENSTTRP00000010679/1-919 KVGDLLKSKE QVLTLSLRTS DGGKVVGTIQ VSVVKMGEIE DGEADHITTD ENSBTAP00000018761/1-714 ---------- --------TS DGGKVVGTIE VSVVKMGEIE DGEADNITTD 201 250 bmy_15474T0/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000425487/1-924 VQGQKCALVC ECTAPESVSG KDNLPFLNSV LKNPVCKLYR FPTSDNKWMR BACU013544/1-939 VQGQKCALVC ECTAPESVSG KDNLPFLNAV LKNPVCKLYR FPTSDNKWMR ENSTTRP00000010679/1-919 VQGQKCALVC ECTAPETVSR KDNLPFLNA- LKNPVCKLYR FPTSDNKWMR ENSBTAP00000018761/1-714 VQGQKCALVC ECSAPESVSR KDNLPFLNAV LKNPVCKLYR FPTSDNKWMQ 251 300 bmy_15474T0/1-581 ---------- ---------- -----DLKRK EE-------- ---------- ENSP00000425487/1-924 IREQMSESIL SFHIPKELIS LHIKEDLCRN QEIKELGELS PHWDNLRKNV BACU013544/1-939 IREQMSESIL SFHIPKELIS LQIKEDLCRN QELKELGELS PHWDNLRKNV ENSTTRP00000010679/1-919 IREQMSESIL SFHIPKELIS LQIKEDLCRN QELKELGELS PHWDNLRKNV ENSBTAP00000018761/1-714 IREQMSESIL SFHIPKELIS LQIKEDLCRN QELKELGELS PHWDNLRKNV 301 350 bmy_15474T0/1-581 ---------- ---------- ---------- ---------- ---------- ENSP00000425487/1-924 LTHCDQMVNM YQDILTELSK ETGSSFKSSS SKGEKTLEFV PINLHLQRMQ BACU013544/1-939 LTHCDQMVNM YQDILTELSK ETGSSFKSSS SKGEKTLEFV PINLHLQRMH ENSTTRP00000010679/1-919 LTHCDQMVNM YQDILTELSK ETGSSFKSSS SKGEKTLEFV PINLHLQRMH ENSBTAP00000018761/1-714 LTHCDQMVNM YQDILTELSK ETGSSFKSSS SKGEKTLEFV PINLHLQRMH 351 400 bmy_15474T0/1-581 ---------- -------TPC AQQQNFKN-- ---------- ---STGYQFI ENSP00000425487/1-924 VHSPHLKDAL YDVITVGAPA AHFQGFKNGG LRKLLHRFET ERRNTGYQFI BACU013544/1-939 VHSPHLKDAL YDVITVGAPA AHFQGFKNGG LRKLLHRFET ERRNTGYQFI ENSTTRP00000010679/1-919 VHSPHLKDAL YDVITVGAPA AHFQGFKNGG LRKLLHRFET ERRNTGYQFI ENSBTAP00000018761/1-714 VHSPHLKDAL YDVITVGAPA AHFQGFKNGG LRKLLHRFEA ERRNTGYQFI 401 450 bmy_15474T0/1-581 YYSPENTAKA KEVLSNINQL QPLIATHADL LLNSASQHSP DSLKNSLKML ENSP00000425487/1-924 YYSPENTAKA KEVLSNINQL QPLIATHADL LLNSASQHSP DSLKNSLKML BACU013544/1-939 YYSPENTAKA KEVLSNINQL QPLIATHADL LLNSASQHSP DSLKNSLKML ENSTTRP00000010679/1-919 YYSPENTAKA KEVLSNINQL QPLIATHADL LLNSASQHSP DSLKNSLKML ENSBTAP00000018761/1-714 YYSPENTAKA KEVLSNINQL QPLIAAHADL LLNSASQHSP DSLKNSLKML 451 500 bmy_15474T0/1-581 SEKDITSIYF QKKLANMYSE RSSELSNKLK SEKSKPKTSS SKCNLPSMPE ENSP00000425487/1-924 SEK------- ---------- ---------- ---------- ---------- BACU013544/1-939 SEK------- ---------- ---------- ---------- ---------- ENSTTRP00000010679/1-919 SEK------- ---------- ---------- ---------- ---------- ENSBTAP00000018761/1-714 SEK------- ---------- ---------- ---------- ---------- 501 550 bmy_15474T0/1-581 QTELFVHAFK DQLVRSALLA LYTARPGGVL KKPPSPKNST EESSSQDPPP ENSP00000425487/1-924 -TELFVHAFK DQLVRSALLA LYTARPGGIL KKPPSPKSST EESSPQDQPP BACU013544/1-939 -TELFVHAFK DQLVRSALLA LYTARPGGVL KKPSSPKTST EESSSQDPPP ENSTTRP00000010679/1-919 -TELFVHAFK DQLVRSALLA LYTARPGGVL KKPPSPKNST EESSSQDPPP ENSBTAP00000018761/1-714 -TELFVHAFK DQLVRSALLA LYTARPGGVL KKPPSPQSGT EESISQDPPL 551 600 bmy_15474T0/1-581 PMRRQDSIPH HSDYDEEEWD RVWAHVGKSL NCIIAMVDKL IERDGSGEGD ENSP00000425487/1-924 VMRGQDSIPH HSDYDEEEWD RVWANVGKSL NCIIAMVDKL IERDGGSEGS BACU013544/1-939 PMRRQDSIPH HSDYDEEEWD RVWAHVGKSL NCIIAMVDKL IERDGSGEGD ENSTTRP00000010679/1-919 PMRRQDSIPH HSDYDEEEWD RVWAHVGKSL NCIIAMVDKL IERDGSGEGD ENSBTAP00000018761/1-714 PVRRQDSIPH HSDYDEEEWD RVWANVGKSL NCIIAMVDKL IERESGGEGS 601 650 bmy_15474T0/1-581 DGSGKDGEKG HSLGDSVITH PQEDWYEQLY PLILTLKDCM GEVVNRAKQS ENSP00000425487/1-924 GGN-NDGEKE PSLTDAIPSH PREDWYEQLY PLILTLKDCM GEVVNRAKQS BACU013544/1-939 DGSGKDGEKG HSLGDSVITH PQEDWYEQLY PLILTLKDCM GEVVNRAKQS ENSTTRP00000010679/1-919 DGSGKDGEKG HSLGDSVITH PQEDWYEQL- PLILT-KDCM GEVVNRAKQS ENSBTAP00000018761/1-714 STSSKDVEKD SSPVDSIITH PKEDWYEQLY PLILTLKDCM GEVVNRAKQS 651 700 bmy_15474T0/1-581 LTFVLLQELA YSLPQCLMLT LRRDVVFSQA LAGLVCGFII KLHTSLYDPG ENSP00000425487/1-924 LTFVLLQELA YSLPQCLMLT LRRDIVFSQA LAGLVCGFII KLQTSLYDPG BACU013544/1-939 LTFVLLQELA YSLPQCLMLT LRRDVVFSQA LAGLVCGFII KLHTSLYDPG ENSTTRP00000010679/1-919 -TFVLLQELA YSLPQCLMLT LRRDVVFSQA LAGLVCGFII KLHTSLYDPG ENSBTAP00000018761/1-714 LTFVLLQELA YSLPQCLMLT LRRDIVFSQA LAGLVCGFII KLHTSLYDPG 701 750 bmy_15474T0/1-581 FLEQLHTVGL IVQYEGLLST YSEEIGMLED MAVGISDLKK VAFKITEATS ENSP00000425487/1-924 FLQQLHTVGL IVQYEGLLST YSDEIGMLED MAVGISDLKK VAFKIIEAKS BACU013544/1-939 FLEQLHTVGL IVQYEGLLST YSEEIGMLED MAVGISDLKK VAFKITEATS ENSTTRP00000010679/1-919 FLEQLHTVGL IVQYEGLLST YSEEIGMLED MAVGISDLKK VAFKITEATS ENSBTAP00000018761/1-714 FLEQLHTVGL IVQYEGLLST YSEEIGMLED MAVGISDLKK VAFKIIEATS 751 800 bmy_15474T0/1-581 NDVLPVITGR REHYVVEVKL PGRMFESLPL QIKEGQLLHV YPVLFNVGIN ENSP00000425487/1-924 NDVLPVITGR REHYVVEVKL PARMFESLPL QIKEGQLLHV YPVLFNVGIN BACU013544/1-939 SDVLPVITGR REHYVVEVKL PGRMFESLPL QIKEGQLLHV YPVLFNVGIN ENSTTRP00000010679/1-919 NDVLPVITGR REHYVVEVKL PGRMFESLPL QIKEGQLLHV YPVLFNVGIN ENSBTAP00000018761/1-714 NDVLPVITGR REHYVVEVKV PARVFESLPL QIKEGQLLHV HPVLFNVGIN 801 850 bmy_15474T0/1-581 EQQTLAERFG DVSLQESINQ ENFELLKEYY TVFMEKMPPD YISHFQEQND ENSP00000425487/1-924 EQQTLAERFG DVSLQESINQ ENFELLQEYY KIFMEKMPPD YISHFQEQND BACU013544/1-939 EQQTLAERFG DVSLQESINQ ENFELLKEYY TVFMEKMPPD YISHFQEQND ENSTTRP00000010679/1-919 EQQTLAERFG DVSLQESINQ ENFELLKEYY TVFMEKMPPD YISHFQEQND ENSBTAP00000018761/1-714 EQQTLAERFG DVSLQESINQ ENFELLKEYY TVFMEKMPPD YISHFQEQND 851 900 bmy_15474T0/1-581 LKGLLENLHQ NIQAKKRKNV EIMWLAATL- ---------- -----EKSSH ENSP00000425487/1-924 LKALLENLLQ NIQSKKRKNV EIMWLAATIC RKLNGIRFTC CKSAKDRTSM BACU013544/1-939 LKGLLENLHQ NIQAKKRKNV EIMWLAATIC RKLNGIRFTC CKSAKDRTSM ENSTTRP00000010679/1-919 LKGLLENLQQ NIQAKKRKNV EIMWLAATIC R-LNGIRFTC CKSAKDRTSM ENSBTAP00000018761/1-714 LKGLLENLHQ NIQAKKRKNV EIMWLAATIC RKLNGIRFTC CKSAKDRTSM 901 950 bmy_15474T0/1-581 YFILSPISNI ----EVNKKH ------CRHR ---------- ----EGCRIE ENSP00000425487/1-924 SVTLEQCSIL RDEHQLHKDF FIRALDCMRR ---------- ----EGCRIE BACU013544/1-939 SVTLEQCSIL RDEHQLHKDF FIRALDCMRS RQTQGALNES DDPETGCLTD ENSTTRP00000010679/1-919 SVTLEQCS-L RDEHQLHKDF FIRALDCMRR ---------- ----EGCRIE ENSBTAP00000018761/1-714 SVTLEQCSIL RDEHQLHKDF FIRALDCMRR ---------- ---------- 951 1000 bmy_15474T0/1-581 NVLKNIKCRK YAFNMLQLMA FPKYYRPPEG TYGKADT ENSP00000425487/1-924 NVLKNIKCRK YAFNMLQLMA FPKYYRPPEG TYGKADT BACU013544/1-939 NKPTSRHFYP VALLLVSSHL LVVWLILSLA LLLAKYQ ENSTTRP00000010679/1-919 NVLKNIKCRK YAFNMLQLMA FPKYYRPPEG TYGKADT ENSBTAP00000018761/1-714 ---------- ---------- ---------- -------