KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:34 2014 Check: 00 .. Name: ENSP00000328023/1-638 Len: 639 Check: 7012 Weight: 1.00 Name: ENSBTAP00000018762/1-598 Len: 639 Check: 3202 Weight: 1.00 Name: ENSTTRP00000001467/1-639 Len: 639 Check: 5260 Weight: 1.00 Name: bmy_08497T0/1-639 Len: 639 Check: 5318 Weight: 1.00 Name: BACU010187/1-625 Len: 639 Check: 6374 Weight: 1.00 // 1 50 ENSP00000328023/1-638 MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE ENSBTAP00000018762/1-598 MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE ENSTTRP00000001467/1-639 MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE bmy_08497T0/1-639 MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE BACU010187/1-625 MLDFFTIFSK GGLVLWCFQG VSDSCTGPVN ALIRSVLLQE RGGNNSFTHE 51 100 ENSP00000328023/1-638 ALTLKYKLDN QFELVFVVGF QKILTLTYVD KLIDDVHRLF RDKYRTEIQQ ENSBTAP00000018762/1-598 ALTLKYKLDN QFELVFVVGF QKILTLTYVD KLIDDVHRLF RDKYRTEIQQ ENSTTRP00000001467/1-639 ALTLKYKLDN QFELVFVVGF QKILTLTYVD KLIDDVHRLF RDKYRTEIQQ bmy_08497T0/1-639 ALTLKYKLDN QFELVFVVGF QKILTLTYVD KLIDDVHRLF RDKYRTEIQQ BACU010187/1-625 ALTLKYKLDN QFELVFV--- ---------- -LIDDVHRLF RDKYRTEIQQ 101 150 ENSP00000328023/1-638 QSALSLLNGT FDFQNDFLRL LREAEESSKI RAPTTMKKFE DSEKAKKPVR ENSBTAP00000018762/1-598 QSALSLLNGT FDFQNDFLRL LREAEESSKI RAPTTMKKFE DSEKAKKPVR ENSTTRP00000001467/1-639 QSALSLLNGT FDFQNDFLRL LREAEESSKV RAPTTMKKFE DSEKAKKPVR bmy_08497T0/1-639 QSALSLLNGT FDFQNDFLRL LREAEESSKV RAPTTMKKFE DSEKAKKPVR BACU010187/1-625 QSALSLLNGT FDFQNDFLRL LREAEESSKV RAPTTMKKFE DSEKAKKPVR 151 200 ENSP00000328023/1-638 SMIETRGEKP KEKAKNSKK- KGAKKEGSDG PLATSKPVPA EKSGLPVGPE ENSBTAP00000018762/1-598 SMIETRGEKP KEKAKNNKKN KGAKKEGSDG PLATSKAAPA EKSGLPVGPE ENSTTRP00000001467/1-639 SMIETRGEKP KEKAKNSKKN KGAKKEGSDG PLATSKAVPA EKSGLPVGPE bmy_08497T0/1-639 SMIETRGEKP KEKAKNSKKN KGAKKEGSDG PLATSKAVPA EKSGLPVGPE BACU010187/1-625 SMIETRGEKP KEKAKNSKKN KGAKKEGSDG PLATSKAVPA EKSGLPVGPE 201 250 ENSP00000328023/1-638 NGVELSKEEL IRRKREEFIQ KHGRGMEKSN KSTKSDAPKE KGKKAPRVWE ENSBTAP00000018762/1-598 NGEELSKEEQ IRRKREEFIQ KHGRGMEKSS KSSKSDAPKE KGKKAPRVWA ENSTTRP00000001467/1-639 NGIELSKEEL IRRKREEFIQ KHGRGMEKSS KSSKSDAPKE KGKKAPRVWA bmy_08497T0/1-639 NGIELSKEEL IRRKREEFIQ KHGRGMEKSS KSSKSDAPKE KGKKAPRVWX BACU010187/1-625 NGIELSKEEL IRRKREEFIQ KHGRGMEKSS KSSKSDAPKE KGKKAPRVWA 251 300 ENSP00000328023/1-638 LGGCANKEVL DYSTPTTNGT PEAALSEDIN LIRGTGSGGQ LQDLDCSSSD ENSBTAP00000018762/1-598 LGGSANKEVL DYSTPTTNGA PEAAPPEDIN LIRGTGPGRQ LQDLDCSSSD ENSTTRP00000001467/1-639 LGGSVNKEVL DYSAPTANGA PEGAPPEDIN LIRGTGSGRQ LQDLDCSSSD bmy_08497T0/1-639 LGGSANKEAL DYSAPTANGA PEGPPPEDIS LIRGTGSGRQ LQDLDCSSSD BACU010187/1-625 LGGSANKEAL DYSAPTANGA PEGAPPEDIN LIRGTGSGRQ LQDLDCSSSD 301 350 ENSP00000328023/1-638 DEGAAQNSTK PSATKGTLGG MFGMLKGLVG SKSLSREDME SVLDKMRDHL ENSBTAP00000018762/1-598 DEGAAQNSTK PSATKGTLGG MFGMLKGLVG SKSLTREDME SVLDKMRDHL ENSTTRP00000001467/1-639 DEGAAQNSTK PSATKGTLGG MFGMLKGLVG SKSLSREDME SVLDKMRDHL bmy_08497T0/1-639 DEGAAQNSTK PSATKGTLGG MFGMLKGLVG SKSLSREDME SVLDKMRDHL BACU010187/1-625 DEGAAQNSTK PSAAKGTLGG MFGMLKGLVG SKSLSREDME SVLDKMRDHL 351 400 ENSP00000328023/1-638 IAKNVAADIA VQLCESVANK LEGKVMGTFS TVTSTVKQAL QESLVQILQP ENSBTAP00000018762/1-598 IAKNVAADIA VQLCESVANK LEGKVMGTFS TVTSTVKQAL QESLVQILQP ENSTTRP00000001467/1-639 IAKNVAADIA VQLCESVANK LEGKVMGTFS TVTSTVKLAL QESLVQILQP bmy_08497T0/1-639 IAKNVAADIA VQLCESVANK LEGKVMGTFS TVTSTVKLAL QESLVQILQP BACU010187/1-625 IAKNVAADIA VQLCDSVANK LEGKVMGTFS TVTSTVKLAL QESLVQILQP 401 450 ENSP00000328023/1-638 QRRVDMLRDI MDAQRRQRPY VVTFCGVNGV GKSTNLAKIS FWLLENGFSV ENSBTAP00000018762/1-598 QRRVDMLRDI MDAQRHQRPY VVTFCGVNGV GKSTNLAKIS FWLLENGFSV ENSTTRP00000001467/1-639 QRRVDMLRDI MDAQRHQRPY VVTFCGVNGV GKSTNLAKIS FWLLENGFSV bmy_08497T0/1-639 QRRVDMLRDI MDAQRHQRPY VVTFCGVNGV GKSTNLAKIS FWLLENGFSV BACU010187/1-625 QRRVDMLRDI MDAQRHQRPY VVTFCGVNGV GKSTNLAKIS FWLLENGFSV 451 500 ENSP00000328023/1-638 LIAACDTFRA GAVEQLRTHT RRLSALHPPE KHGGRTMVQL FEKGYGKDAA ENSBTAP00000018762/1-598 LIAACDTFRA GAVEQLRTHT RRLSALHPPE KHGGRTMVQL FEKGYGKDAA ENSTTRP00000001467/1-639 LIAACDTFRA GAVEQLRTHT RRLRALHPPE NHGGRAMVQL FEKGYGKDAA bmy_08497T0/1-639 LIAACDTFRA GAVEQLRTHT RRLHALHPPE NHGGRAMVQL FEKGYGKDAA BACU010187/1-625 LIAACDTFRA GAVEQLRTHT RRLHALHPPE NHGGRAMVQL FEKGYGKDAA 501 550 ENSP00000328023/1-638 GIAMEAIAFA RNQGFDVVLV DTAGRMQDNA PLMTALAKLI TVNTPDLVLF ENSBTAP00000018762/1-598 GIAMEAIAFA RNQGFDVVLV DTAGRMQDNA PLMTALAKLI TVNTPDLVLF ENSTTRP00000001467/1-639 GIAMEAIAFA RNQGFDVVLV DTAGRMQDNA PLMTALAKLI TVNTPDLVLF bmy_08497T0/1-639 GIAMEAIAFA RNQGFDVVLV DTAGRMQDNA PLMTALAKLI TVNTPDLVLF BACU010187/1-625 GIAMEAIAFA RNQGFDVVLV DTAGRMQDNA PLMTALAKLI TVNTPDLVLF 551 600 ENSP00000328023/1-638 VGEALVGNEA VDQLVKFNRA LADHSMAQTP RLIDGIVLTK FDTIDDKVGA ENSBTAP00000018762/1-598 VGEALVGNEA VDQLVKFNRA LADHSMAQTP RLIDGIVLTK FDTIDDKV-- ENSTTRP00000001467/1-639 VGEALVGNEA VDQLVKFNRA LADHSMAQTP RLIDGIVLTK FDTIDDKVGA bmy_08497T0/1-639 VGEALVGNEA VDQLVKFNRA LADHSMAQTP RLIDGIVLTK FDTIDDKVGA BACU010187/1-625 VGEALVGNEA VDQLVKFNRA LADHSMAQTP RLIDGIVLTK FDTIDDKVGA 601 650 ENSP00000328023/1-638 AISMTYITSK PIVFVGTGQT YCDLRSLNAK AVVAALMKA ENSBTAP00000018762/1-598 ---------- ---------- ---------- --------- ENSTTRP00000001467/1-639 AISMTYITSK PIVFVGTGQT YCDLRSLNAK AVVAALMKA bmy_08497T0/1-639 AISMTYITSK PIVFVGTGQT YCDLRSLNAK AVVAALMKA BACU010187/1-625 AISMTYITSK PIVFVGTGQT YCDLRSLNAK AVVAALMKA