KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:35 2014 Check: 00 .. Name: ENSTTRP00000002102/1-528 Len: 617 Check: 4354 Weight: 1.00 Name: ENSP00000221922/1-531 Len: 617 Check: 1481 Weight: 1.00 Name: ENSBTAP00000018765/1-527 Len: 617 Check: 5467 Weight: 1.00 Name: bmy_06600T0/1-608 Len: 617 Check: 9860 Weight: 1.00 Name: BACU018267/1-524 Len: 617 Check: 3939 Weight: 1.00 // 1 50 ENSTTRP00000002102/1-528 ---------- ---------- ---------- ---------- ---------- ENSP00000221922/1-531 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018765/1-527 ---------- ---------- ---------- ---------- ---------- bmy_06600T0/1-608 MTRFSAPLHV VRGGSDARGP GAADAEADGA GVADAAGSPG QEPRVLCPDS BACU018267/1-524 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000002102/1-528 --MSATLDLK SKEEKDAELD KRIEALRRKN EALIRRYQEI EEDRKKAELE ENSP00000221922/1-531 --MAATLDLK SKEEKDAELD KRIEALRRKN EALIRRYQEI EEDRKKAELE ENSBTAP00000018765/1-527 --MSAALDLK SKEEKDAELD KRIEALRRKN EALIRRYQEI EEDRKKAELE bmy_06600T0/1-608 AGKSATLDLK SKEEKDAELD KRIEALRRKN EALIRRYQEI EEDRKKAELE BACU018267/1-524 --QSATLDLK SKEEKDAELD KRIEALRRKN EALIRRYQEI EEDRKKAELE 101 150 ENSTTRP00000002102/1-528 GVAVTAPRKG RSVEKENVAM EMEKNLGPSR RSPVTPRPPG ASM-GRIPPQ ENSP00000221922/1-531 GVAVTAPRKG RSVEKENVAV ESEKNLGPSR RSPGTPRPPG ASKGGRTPPQ ENSBTAP00000018765/1-527 GVAVTGPRKS RSVEKENVAV --EKNLGPSR RSPGTPRPPG VSKGGRIPPQ bmy_06600T0/1-608 GVAVTAPRKG RSVEKENVAM EMEKNLGPSR RSAGTPRPPG ASKGGRIPPQ BACU018267/1-524 GVAVTAPRKG RSVEKENVAM EVEKNLGPSR RSPGTPRPPG ASKGGRIPPQ 151 200 ENSTTRP00000002102/1-528 HGGRAGMGRA GMGRASRSWE DSPGEQPR-G GAGGRGRRGR ARGSPHLSGT ENSP00000221922/1-531 QGGRAGMGR- ----ASRSWE GSPGEQPRGG GAGGRGRRGR GRGSPHLSGA ENSBTAP00000018765/1-527 HGGRAGMGR- ----TSRSWE DSPGEQPR-G GAGGRSRRGR GRGSPHLSGG bmy_06600T0/1-608 HGGRAGMGRA GMGQASRSWA DSPGEQPR-G GAGGRGRRGR GRGSPHLSGT BACU018267/1-524 HGGRAGMGR- ----ASRSWE DSPGEQPR-G GAGGRGRRGR GRGSPHLSGN 201 250 ENSTTRP00000002102/1-528 GDASAADRKS KEWEERRKQN IEKMNEEMEK IAEYERNQRE GVLEPNPVRN ENSP00000221922/1-531 GDTSISDRKS KEWEERRRQN IEKMNEEMEK IAEYERNQRE GVLEPNPVRN ENSBTAP00000018765/1-527 GDASTADRKS KEWEERRKQN IEKMNEEMEK IAEYERNQRE GVLEPNPVRN bmy_06600T0/1-608 GDASTADRKS KEWEERRKQN IEKMNEEMEK IAEYERNQRE GVLEPNPVRN BACU018267/1-524 GDASTADRKS KEWEERRKQN IEKMNEEMEK IAEYERNQRE GVLEPNPVRN 251 300 ENSTTRP00000002102/1-528 FLDDPRRRSG PLEEPERDRR EGSRRHGRNW GGPDFERVRC GLEQERQGRR ENSP00000221922/1-531 FLDDPRRRSG PLEESERDRR EESRRHGRNW GGPDFERVRC GLEHERQGRR ENSBTAP00000018765/1-527 FLDDPRRRSG PLEEPERDRR EGSRRHGRNW GGSDFERVRY GLEQERQGRR bmy_06600T0/1-608 FLDDPRRRSG PLEEPERDRR EGSRRHGRNW GGADFERVRC GLEQERQGRR BACU018267/1-524 FLDDPRRRSG PLEEPERDRR EGSRRHGRNW GGPDFERVRC GLEQDRQGRR 301 350 ENSTTRP00000002102/1-528 AGLGGAGDMT LSMTGRERSE YLRWKQEREK IDQERLQRHR KPTGQWRREW ENSP00000221922/1-531 AGLGSAGDMT LSMTGRERSE YLRWKQEREK IDQERLQRHR KPTGQWRREW ENSBTAP00000018765/1-527 AGLGGAGDMT LSMTGRERSE YLRWKQEREK IDQERLQRHR KPTGQWRREW bmy_06600T0/1-608 AGLGGAGDMT LSMTGRERSE YLRWKQEREK IDQERLQRHR KPTGQWRREW BACU018267/1-524 AGLGGAGDMT LSMTGRERSE YLRWKQEREK IDQERLQRHR KPTGQWRREW 351 400 ENSTTRP00000002102/1-528 DAEKTDGMFK DGPAVALEPS HRYDDQAWAR PPKPPTFREF LSQHKTEV-S ENSP00000221922/1-531 DAEKTDGMFK DGPVPAHEPS HRYDDQAWAR PPKPPTFGEF LSQHKAEASS ENSBTAP00000018765/1-527 DAEKTDGMFK DGPAVALEPS HRYDDQAWAR PPKPPTFREF LSQHKTEV-S bmy_06600T0/1-608 DAEKTDGMFK DGPAVALEPS HRYDDQAWAR PPKPPTFREF LSQHKTEV-S BACU018267/1-524 DAEKTDGMFK DGPAVALEPS HRYDDQAWAR PPKPPTFREF LSQHKTEV-S 401 450 ENSTTRP00000002102/1-528 RRKRKSGRPQ AKAAPRAYSD HDDRWETQE- AVSAAPEPTQ PSTPE----E ENSP00000221922/1-531 RRRRKSSRPQ AKAAPRAYSD HDDRWETKEG AASPAPETPQ PTSPETSPKE ENSBTAP00000018765/1-527 RRKKKSSRPQ PKAAPRAYSD HDDRWEMKE- AMSTAPEPPQ PALPK----E bmy_06600T0/1-608 RRKRKSGRPQ AKAAPRAYSD HDDRWETQE- AVSAASEPTQ PATPE----E BACU018267/1-524 RRKRKSSRPQ AKAAPRAYSD HDDRWETQE- AVSAAPEPTQ PATPE----E 451 500 ENSTTRP00000002102/1-528 APMQXXXXXX XXXXXXXXXX XX-------- -------XXX XXXXXXXXXX ENSP00000221922/1-531 TPMQPPEIPA PAHRPPEDEG EEN------- EGEEDEEWED ISED-EEEEE ENSBTAP00000018765/1-527 APTQLPETPA PAHRPPEDEG EEGE------ DEGEDEEWED VSEDEEEEEE bmy_06600T0/1-608 APTQPPESPA PAHRPPEDEG EEGEGGEGEG EDGEGEEWED MSED-AEEEE BACU018267/1-524 APTQV----- -GRRVISGQG EG-------- EDGEGEEWED MSED-AEEEE 501 550 ENSTTRP00000002102/1-528 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000221922/1-531 IEVEE---GD EEEPAQDHQA PEAAPT---- GIPCSEQAHG VPFSPEEPLL ENSBTAP00000018765/1-527 IEEEEEADDE EEEPAGDHQP QEAEPS---- GSPAREHGDK ETARPEEPLP bmy_06600T0/1-608 IEEEEEADEE GEEPARDHRP QEAEPSGSPT GSPTGERGDK EPARPEEPLP BACU018267/1-524 IEEEEEADEE GEEPARDHRP HEAEPSGSPT GSPTGERGDE EPARPEEPLP 551 600 ENSTTRP00000002102/1-528 XXXXXXXXXX XXXXXXXXXX XXXXXEEMEL NSPRTAHPAD ALSPGEAWPI ENSP00000221922/1-531 EPQAPGTPSS PFSPPSGHQP VSDWGEEVEL NSPRTTHLAG ALSPGEAWPF ENSBTAP00000018765/1-527 LPQAPATPSS PFSPPGGHQP VSDWGEEMEL NSPRTAHPAD AVSPGEAWPF bmy_06600T0/1-608 LPQAPATPSS PFSPTGGHQP VSDWGEEMEL NSPRTAHPAD ALSP-EADPE BACU018267/1-524 LPQAPATPSS PFSPTGGHQP VSDWGEEMEL NSPRTAHPAD ALSPGEAWPF 601 650 ENSTTRP00000002102/1-528 G--------- -----NA ENSP00000221922/1-531 E--------- -----SV ENSBTAP00000018765/1-527 E--------- -----NA bmy_06600T0/1-608 GQETAEITDF QRACPNS BACU018267/1-524 G--------- -----NA