KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:35 2014 Check: 00 .. Name: ENSP00000204679/1-305 Len: 370 Check: 5014 Weight: 1.00 Name: ENSBTAP00000018766/1-306 Len: 370 Check: 1115 Weight: 1.00 Name: bmy_01912T0/1-344 Len: 370 Check: 2753 Weight: 1.00 Name: ENSTTRP00000011364/1-267 Len: 370 Check: 953 Weight: 1.00 Name: BACU019890/1-251 Len: 370 Check: 1240 Weight: 1.00 // 1 50 ENSP00000204679/1-305 MAAGLARLLL LLGLSAGGPA PAGAAKMKVV EEPNAFGVNN PFLPQASRLQ ENSBTAP00000018766/1-306 MAARLAGLAV VLGFAARGPA PGGAAKMKVV EEPNTFGLNN PFLPQTSRLQ bmy_01912T0/1-344 ---------- ---------- ------MKVV EEPNTFGLNN PFLPHTSRLQ ENSTTRP00000011364/1-267 ---------- ---------- ---------- -------LNN PF-PQISR-Q BACU019890/1-251 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000204679/1-305 AKRDPSPVS- ---------- ---------- ---------- -----GPVHL ENSBTAP00000018766/1-306 PKRDPSPVS- ---------- ---------- ---------- -----GPAHL bmy_01912T0/1-344 PRRDPSPVSV LKFKPLDLFL NGPGSVGFCT PALRTALSGP CSPLPGPVHL ENSTTRP00000011364/1-267 ARRDPSPVS- ---------- ---------- ---------- -----GPVHL BACU019890/1-251 -----SPLS- ---------- ---------- ---------- -----GPVHL 101 150 ENSP00000204679/1-305 FRLSGKCFSL VESTYKYEFC PFHNVTQHEQ TFRWNAYSGI LGIWHEWEIA ENSBTAP00000018766/1-306 SRLSGKCFSL VESTYKYELC PFHNVTQHEQ TFRWNAYSGI LGIWHEWEIT bmy_01912T0/1-344 SRLSGKCFSL VESTYKYELC PFHNVTQHEQ TFRWNAYSGI LGIWHEWEIA ENSTTRP00000011364/1-267 SRLSGKCFSL VESTYKYELC PFHNVTQHEQ TFRWNAYSGI LGIWHEWEIA BACU019890/1-251 SRLSGKCFSL VESTYKYELC PFHNVTQHEQ TFRWNAYSGI LGIWHEWEIA 151 200 ENSP00000204679/1-305 NNTFTGMWMR DGDACRSRSR QSKVELACGK SNRLAHVSEP STCVYALTFE ENSBTAP00000018766/1-306 NNTFRGMWMR DGDACQSRSR QSKVELTCGK SNRLAHVSEP STCVYALTFE bmy_01912T0/1-344 NNTFRGMWMR DGDSCHSQSR QSKVELTCGK TNRLAHVSEP STCVYALTFE ENSTTRP00000011364/1-267 NNTFRGMWMR DGDSCHSRSR QSKVELTCGK TNRLAHVSEP STCVYALTFE BACU019890/1-251 NNTFRGMWMR DGDSCHSRSR QSKVELTCGK TNRLAHVSEP STCVYALTFE 201 250 ENSP00000204679/1-305 TPLVCHPHAL L--------- ---------- ---------V YPTLPEALQR ENSBTAP00000018766/1-306 TPLVCHPHSL L--------- ---------- ---------V YPTLPAALQQ bmy_01912T0/1-344 TPLVCHPHSL LGGRRGRRGV LGGVGGRGAQ LSLVSVGFSV YPALPMAMQQ ENSTTRP00000011364/1-267 TPLVCHPHSL L--------- ---------- ---------V YPALPTALQL BACU019890/1-251 TPLVCHPHSL L--------- ---------- ---------V YPALPMALQQ 251 300 ENSP00000204679/1-305 QWDQVEQDLA DELITPQGHE KLLRTLFEDA GYLKTPEENE PTQLEGGPDS ENSBTAP00000018766/1-306 RWDQLEQDLV DELITAQGYE KSLRAIFEDA GYLKTSEPNE AAQQEGGTKG bmy_01912T0/1-344 RWDRVEQDLA DELITSQGYE KSLRAIFEDA GYLKTPEQSE SVQQEGGAKG ENSTTRP00000011364/1-267 RWDRLEQDLA DELITSQGYE KSLRAIFEDA GYLKTPKQSE SVQQEGGAKG BACU019890/1-251 RWDRVEQDLA DELITSQGYE KSLRAIFEDA GYLKTPEQSE SVQQEGGAKG 301 350 ENSP00000204679/1-305 LGFETLENCR KAHKELSKEI KRLKGLLTQH GIPYTRPTET SNLEHLGHET ENSBTAP00000018766/1-306 LRFETLESCQ EAHKALSQEI KRLQGVLTQH GVPYGKPTET PSSEHWGPQV bmy_01912T0/1-344 LVFQTLESCN EAHKTLSKEM KRLKSILTQH GLPYVKPAET SSSEHLGPRA ENSTTRP00000011364/1-267 LVFQTLESCN EAHKALSKEM KRLTSILTQH GLPYVKPAET SSSEHLGPRT BACU019890/1-251 LVFQTLESCN EAHKALSKEM KRLKSILTQH SLPYMKPAET SSSEHLGPRT 351 400 ENSP00000204679/1-305 PRAKSPEQLR GDPGLRG-SL ENSBTAP00000018766/1-306 PTAGMAEPLR GDPGLRGDTL bmy_01912T0/1-344 PTDKTAELLR GDTGLRGNTL ENSTTRP00000011364/1-267 PTDKTAELLR GDPGLRGNTL BACU019890/1-251 PTDKTAELLR GDPGLRANTL