KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:36 2014 Check: 00 .. Name: bmy_08738T0/1-554 Len: 603 Check: 9442 Weight: 1.00 Name: BACU006611/1-534 Len: 603 Check: 8879 Weight: 1.00 Name: ENSTTRP00000009410/1-567 Len: 603 Check: 9888 Weight: 1.00 Name: ENSP00000369695/1-568 Len: 603 Check: 6010 Weight: 1.00 Name: ENSBTAP00000018772/1-567 Len: 603 Check: 78 Weight: 1.00 // 1 50 bmy_08738T0/1-554 ---------- ---------- ---------- ---MFRK--- --------EE BACU006611/1-534 ---------- ---------- ---------- --MVFVRGPE HSNIQHFVEK ENSTTRP00000009410/1-567 MASSCAVQVK LELGHRAQVR KKPTVEGFTH DWMVFVRGPE HSNIQHFVEK ENSP00000369695/1-568 MASSCAVQVK LELGHRAQVR KKPTVEGFTH DWMVFVRGPE HSNIQHFVEK ENSBTAP00000018772/1-567 MASSCAVQVK LELGHRAQVR KKPTVEGFTH DWMVFVRGPE HSNIQHFVEK 51 100 bmy_08738T0/1-554 VAF---TSVR EENPVCKDPP YKVEESGYAG FILPIEVYFK NKVHNETYFS BACU006611/1-534 VVFHLHESFP RPKRVCKDPP YKVEESGYAG FILPIEVYFK NK-------- ENSTTRP00000009410/1-567 VVFHLHESFP RPKRVCKDPP YKVEESGYAG FILPIEVYFK NK-------- ENSP00000369695/1-568 VVFHLHESFP RPKRVCKDPP YKVEESGYAG FILPIEVYFK NK-------- ENSBTAP00000018772/1-567 VVFHLHESFP RPKRVCKDPP YKVEESGYAG FILPIEVYFK NK-------- 101 150 bmy_08738T0/1-554 VCNMKKWYTP NCRDVDQLLE EPKKVRFDYD LFLHLEGHPP VNHLRCEKLT BACU006611/1-534 ---------- ---------E EPKKVRFDYD LFLHLEGHPP VNHLRCEKLT ENSTTRP00000009410/1-567 ---------- ---------E EPKKVRFDYD LFLHLEGHPP VNHLRCEKLT ENSP00000369695/1-568 ---------- ---------E EPRKVRFDYD LFLHLEGHPP VNHLRCEKLT ENSBTAP00000018772/1-567 ---------- ---------E EPKKVRFDYD LFLHLEGHPP VNHLRCEKLT 151 200 bmy_08738T0/1-554 FNNPTEEFRR KLLKAGGDPN RSTHPSSSSS SSSCSSSSSS SSSSSSSSSS BACU006611/1-534 FNNPTEEFRR KLLKAGGDPN RSTHPSSSSS SSSCSSSSSS SSSSSSSSSS ENSTTRP00000009410/1-567 FNNPTEEFRR KLLKAGGDPN RSIHPSGSSS SSSCSSSSSS SSSSSSSSSS ENSP00000369695/1-568 FNNPTEDFRR KLLKAGGDPN RSIHTSSSSS SSSSSSSSSS SSSSSSSSSS ENSBTAP00000018772/1-567 FNNPTEEFRR KLLKAGGDPN RSIHTSSSSS SSSCSSSSSS SSSSSSSSSS 201 250 bmy_08738T0/1-554 SSSSSSSSSS SSSSSS--SF SKPHKLTKEH KEKPSKDSRE HKSAFKEPSR BACU006611/1-534 SSSSSSSSSS SSSSSSS-SF SKPHKLTKEH KEKPSKDSRE HKSAFKEPSR ENSTTRP00000009410/1-567 SSSSSSSSSS SSSSSS--SF SKPHKLTKEH KEKPSKDSRE HKSAFKEPSR ENSP00000369695/1-568 SSSSSSSSSS SSSSSSSTSF SKPHKLMKEH KEKPSKDSRE HKSAFKEPSR ENSBTAP00000018772/1-567 SSSSSSSSSS SSSSSSSTSF SKPHKLMKEH KEKPSKDSRE HKSAFKEPSR 251 300 bmy_08738T0/1-554 DHNKSSKESS KKPKENKPLK EEKIVPKMAF KEPKPMSKEP KPDSNLLTIT BACU006611/1-534 DHNKSSKESS KKPKENKPLK EEKIVPKMAF KEPKPMSKEP KPDSNLLTIT ENSTTRP00000009410/1-567 DHNKSSKESS KKPKENKPLK EEKIVPKMAF KEPKPMSKEP KPDSNLLTIT ENSP00000369695/1-568 DHNKSSKESS KKPKENKPLK EEKIVPKMAF KEPKPMSKEP KPDSNLLTIT ENSBTAP00000018772/1-567 DHNKSSKESS KKPKENKPLK EEKIVPKMAF KEPKPMSKEP KPDSNLLTIT 301 350 bmy_08738T0/1-554 SGQQEKKPPS KRPPISDSEE LSAKKRKKSS SEALFKSFSN APPLILTCSA BACU006611/1-534 SGQQEKKPPS KRPPVSDSEE LSAKKRKKSS SEALFKSFSN APPLILTCSA ENSTTRP00000009410/1-567 SGQQDKKAPS KRPPIADSEE LSAKKRKKSS SEALFKSFSN APPLILTCSA ENSP00000369695/1-568 SG-QDKKAPS KRPPISDSEE LSAKKRKKSS SEALFKSFSS APPLILTCSA ENSBTAP00000018772/1-567 SGQQDKKAPS KRPPISDSEE LSAKKRKKSS SEALFKSFSS APPLILTCSA 351 400 bmy_08738T0/1-554 DKKQIKDKSH GKMGKVKIES ETSEKKKSTL PPFDDIVDPN DSDVEENMSS BACU006611/1-534 DKKQIKDKSH GKMGKVKIES ETSEKKKSTL PPFDDIVDPN DSDVEENMSS ENSTTRP00000009410/1-567 DKKQIKDKSH GKMGKVKIES ETSEKKKSTL PPFDDIVDPN DSDVEENMSS ENSP00000369695/1-568 DKKQIKDKSH VKMGKVKIES ETSEKKKSTL PPFDDIVDPN DSDVEENISS ENSBTAP00000018772/1-567 DKKQIKDKSH VKMGKVKIES ETSEKKKSTL PPFDDIVDPN DSDVEENMSS 401 450 bmy_08738T0/1-554 KSDSEQPSPA SSSSSSSSSF TPSQTRQQGP LRSIMKDLHS DDNEEESDEA BACU006611/1-534 KSDSEQPSPA --SSSSSSSS TPSQTRQQGP LRSIMKDLHS DDNEEESDEA ENSTTRP00000009410/1-567 KSDSEQPSPA SSSSSSSSSF TPSQTRQQGP LRSIMKDLHS DDNEEESDEA ENSP00000369695/1-568 KSDSEQPSPA SSSSSSSSSF TPSQTRQQGP LRSIMKDLHS DDNEEESDEV ENSBTAP00000018772/1-567 KSDSEQPSPA --SSSSSSSF TPSQTRQQGP LRSIMKDLHS DDNEEESDEA 451 500 bmy_08738T0/1-554 EDNDNDSEME RPVNRGGSRS RRVSLSDGSD SESSSASSPL HHEPPPPLLK BACU006611/1-534 EDNDNDSEME RPVNRGGSRS RRVSLSDGSD SESSSASSPL HHEPPPPLLK ENSTTRP00000009410/1-567 EDNDNDSEME RPVNRGGSRS RRVSLSDGSD SESSSASSPL HHEPPPPLLK ENSP00000369695/1-568 EDNDNDSEME RPVNRGGSRS RRVSLSDGSD SESSSASSPL HHEPPPPLLK ENSBTAP00000018772/1-567 EDNDNDSEME RPVNRGGSRS RRVSLSDGSD SESSSASSPL HHEPPPPLLK 501 550 bmy_08738T0/1-554 TNNNQILEVK SPIKQSKSDK QIKNGECDKV GVQSITAYLD ELVELHRRLM BACU006611/1-534 TNNNQILEVK SPIKQSKSDK QIKNGECDKA -------YLD ELVELHRRLM ENSTTRP00000009410/1-567 TNNNQILEVK SPIKQSKSDK QIKNGECDKA -------YLD ELVELHRRLM ENSP00000369695/1-568 TNNNQILEVK SPIKQSKSDK QIKNGECDKA -------YLD ELVELHRRLM ENSBTAP00000018772/1-567 TNNNQILEVK SPIKQSKSDK QIKNGECDKA -------YLD ELVELHRRLM 551 600 bmy_08738T0/1-554 TLRERHILQQ IVNLIEETGH FHITNTTFDF DLCSLDKTTV RKLQSYLETS BACU006611/1-534 TLRERHILQQ IVNLIEETGH FHITNTTFDF DLCSLDKTTV RKLQSYLETS ENSTTRP00000009410/1-567 TLRERHILQQ IVNLIEETGH FHITNTTFDF DLCSLDKTTV RKLQSYLETS ENSP00000369695/1-568 TLRERHILQQ IVNLIEETGH FHITNTTFDF DLCSLDKTTV RKLQSYLETS ENSBTAP00000018772/1-567 TLRERHILQQ IVNLIEETGH FHITNTTFDF DLCSLDKTTV RKLQSYLETS 601 650 bmy_08738T0/1-554 GTS BACU006611/1-534 GTS ENSTTRP00000009410/1-567 GTS ENSP00000369695/1-568 GTS ENSBTAP00000018772/1-567 GTS