KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:05:39 2014 Check: 00 .. Name: ENSP00000367808/1-180 Len: 289 Check: 534 Weight: 1.00 Name: ENSBTAP00000018787/1-192 Len: 289 Check: 7101 Weight: 1.00 Name: bmy_10059T0/1-173 Len: 289 Check: 5805 Weight: 1.00 Name: ENSTTRP00000011361/1-274 Len: 289 Check: 1809 Weight: 1.00 // 1 50 ENSP00000367808/1-180 ---------- ---------- ---------- ---------- -----MEAAR ENSBTAP00000018787/1-192 ---------- ---------- ---------- ---------- -----MEATR bmy_10059T0/1-173 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011361/1-274 VSGPRALCCP TDPAMFPGQL FHPARLSGAC VREHCRLQAA LPSWHPQASR 51 100 ENSP00000367808/1-180 RPRLGLSRRR P--------- ---------- ---------- ---------- ENSBTAP00000018787/1-192 RSRLSLSRRR PP-------- ---------- ---------- ---------- bmy_10059T0/1-173 -----MGQKA PP-------- ---------- ---------- ---------- ENSTTRP00000011361/1-274 WPRQEAAQPL RPSWLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000367808/1-180 ---------R PAGGPSGGRP WFLLGGDERE RLWAELLRTV SPELILDHEV ENSBTAP00000018787/1-192 ------LGVR PRSNTAGSLP D----GGECA KLWTELLRTA SADLNVDGEL bmy_10059T0/1-173 --------ER SPSNPPGSPP D----GGECA RPWAELLRAA SADLNADGEP ENSTTRP00000011361/1-274 XXXXXXXXXX SPSKPPGSPP D----GGECA RPWAELLRAA CAELNVDGEP 151 200 ENSP00000367808/1-180 PSLPAFPGQE PRCGPE--PT EVFTVGPKTF SWTPFP---P DLWG-PGRSY ENSBTAP00000018787/1-192 PPLPAFPDQE PRRSPERPPP ETFTVGTETF FWTPFPAPSP GRGGNSGGSD bmy_10059T0/1-173 PPLPAFPGQE PRRSPERAPP ESFTVGTETF SWTPFP-PAP RRGGDPSHSD ENSTTRP00000011361/1-274 PPLPAFPGQE PRRSPERAPP ESFIVGTETF SWTPFP-PAP RRGGDPSDCD 201 250 ENSP00000367808/1-180 RLLHGAGGHL ESPARSLPQR PAPDPCRAPR VEQQP----- -----SVEGA ENSBTAP00000018787/1-192 LVLSAVRGRT G----SPQQY AAPELRGTPS AEEQPSEEQP SQRQSSVDGA bmy_10059T0/1-173 RVLREALGRT GSSAWSPQRH SAPEPRGTSS AEEQP----- -----SVEGS ENSTTRP00000011361/1-274 RVLREALGRT GSSAWSPQRH PAPEPRGTSS AEEQP----- -----SVEGL 251 300 ENSP00000367808/1-180 AALRSCPMCQ KEFAPRLTQL DVDSHLAQCL AESTEDVTW ENSBTAP00000018787/1-192 MTLQSCPMCQ VDFAPGLAQL DIDGHLAQCL ADSTDDIEW bmy_10059T0/1-173 PTLQSCPMCQ ADFAPRLTQL DVDSHLARCL AESTDDAVW ENSTTRP00000011361/1-274 PTLQSCPMCQ AVFAPRLTQL DIESHLAQCL AESTDDVVW