KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:39 2014 Check: 00 .. Name: bmy_06472T0/1-513 Len: 693 Check: 5234 Weight: 1.00 Name: ENSP00000359423/1-603 Len: 693 Check: 4843 Weight: 1.00 Name: ENSBTAP00000018789/1-603 Len: 693 Check: 5244 Weight: 1.00 Name: BACU007746/1-308 Len: 693 Check: 217 Weight: 1.00 Name: ENSTTRP00000002083/1-603 Len: 693 Check: 5286 Weight: 1.00 // 1 50 bmy_06472T0/1-513 ---------- ---------- ---------- ---------- ---------- ENSP00000359423/1-603 MASASTSKYN SHSLENESIK RTSRDGVNRD LTEAVPRLPG ETLITDKEVI ENSBTAP00000018789/1-603 MASAPTSKYN SHSLENESIK RTSRDGVNRD VGETLPRLPG EIRITDKEVI BACU007746/1-308 --MAPFC--- ---------F QTSRDGVNRD IGEALPRLPG ETRITDKEVI ENSTTRP00000002083/1-603 MASAPTSKYN SHSLENESIK RTSRDGVNRD IGEALPRLPG ETRITDKEVI 51 100 bmy_06472T0/1-513 ---------- ---------- ---------- ---------- ---------- ENSP00000359423/1-603 YICPFNGPIK GRVYITNYRL YLRSLE---- ---------- ---------- ENSBTAP00000018789/1-603 YICPFNGPIK GRVYITNYRL YLRSLE---- ---------- ---------- BACU007746/1-308 YICPFNGPIK GRVYITNYRL YLRSLEMNGC EDDTRKGLLW YPAQMMYSEH ENSTTRP00000002083/1-603 YICPFNGPIK GRVYITNYRL YLRSLE---- ---------- ---------- 101 150 bmy_06472T0/1-513 ---------- ---------M IGIFIDATKI AGREN----- Y---ISMHSM ENSP00000359423/1-603 ---------- TDSSLILDVP LGVISRIEKM GGATSRGENS YGLDITCKDM ENSBTAP00000018789/1-603 ---------- TDSALILDVP LGVISRIEKM GGATSRGENS YGLDITCKDL BACU007746/1-308 SSRCYLGVTI SDSALILDVP LGVISRIEKM GGATSRGENS YGLDITCKDM ENSTTRP00000002083/1-603 ---------- TDSALILDVP LGVISRIEKM GGATSRGENS YGLDITCKDM 151 200 bmy_06472T0/1-513 HDI------- ----KEIMGI I--------- -LPIFAFLNE EKFDVDGWMV ENSP00000359423/1-603 RNLRFALKQE GHSRRDMFEI LTRYAFPLAH SLPLFAFLNE EKFNVDGWTV ENSBTAP00000018789/1-603 RNLRFALKQE GHSRRDMFEI LTRYAFPLAH SLPIFAFLNE EKFNVDGWTV BACU007746/1-308 RNLRFALKQE GHSRRDMFEI LTRYAFPLAH SLPIFAFLNE EKFDVDGWMV ENSTTRP00000002083/1-603 RNLRFALKQE GHSRRDMFEI LTRYAFPLAH SLPIFAFLNE EKFDVDGWMV 201 250 bmy_06472T0/1-513 YNPVEEYRRQ GLPNHHWRIT FINKCYELCD TYPALLVVPY RASDDDLRRV ENSP00000359423/1-603 YNPVEEYRRQ GLPNHHWRIT FINKCYELCD TYPALLVVPY RASDDDLRRV ENSBTAP00000018789/1-603 YNPVEEYRRQ GLPNHHWRIT FINKCYKLCD TYPALLVVPY RASDEDLRRV BACU007746/1-308 YNPVEEYRRQ GLPNHHWRIT FINKCYELCD TYPALLVVPY RASDDDLRRV ENSTTRP00000002083/1-603 YNPVEEYRRQ GLPNHHWRIT FINKCYELCD TYPALLVVPY RASDDDLRRV 251 300 bmy_06472T0/1-513 ATFRSRNRIP VLSWIHPENK TVIVRCSQPL VGMSGKRNKD DEKYLDVIRE ENSP00000359423/1-603 ATFRSRNRIP VLSWIHPENK TVIVRCSQPL VGMSGKRNKD DEKYLDVIRE ENSBTAP00000018789/1-603 ATFRSRNRIP VLSWIHPENK TVIVRCSQPL VGMSGKRNKE DERYLDVIRE BACU007746/1-308 ATFRSRNRLP VLSWIHPENK TVIVRCSQPL VGMSGKRNKD DEKYLDVIRE ENSTTRP00000002083/1-603 AAFRSRNRIP VLSWIHPENK TVIMRCSQPL VGMSGKRNKD DEKYLDVIRE 301 350 bmy_06472T0/1-513 TNRQINKLTI YDARPNVNAV ANKATGGGYE SDDAYHNAEL FFLDIHNIHV ENSP00000359423/1-603 TNKQISKLTI YDARPSVNAV ANKATGGGYE SDDAYHNAEL FFLDIHNIHV ENSBTAP00000018789/1-603 TNRQVNKLTI YDARPNVNAV ANKATGGGYE SDDVYHNAEL FFLDIHNIHV BACU007746/1-308 TNRQINKLTI YDARPNVNAV AK-------- ---------- ---------- ENSTTRP00000002083/1-603 TNRQINKLTI YDARPNVNAV ANKATGGGYE SDDAYHNAEL FFLDIHNIHV 351 400 bmy_06472T0/1-513 MRESLKKVKD IVYPNVEESH WLSSLESTHW LEHIKATTDS HVFLWQLVLT ENSP00000359423/1-603 MRESLKKVKD IVYPNVEESH WLSSLESTHW LEHIK----- ------LVLT ENSBTAP00000018789/1-603 MRESLKKVKD IVYPNVEESH WLSSLESTHW LEHIK----- ------LVLT BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 MRESLKKVKD IVYPNVEESH WLSSLESTHW LEHIK----- ------LVLT 401 450 bmy_06472T0/1-513 GAIQVADRVS SGKSSVVVHC SDGWDRTAQL TSLAMLMLDS YYRSIEGFEI ENSP00000359423/1-603 GAIQVADKVS SGKSSVLVHC SDGWDRTAQL TSLAMLMLDS FYRSIEGFEI ENSBTAP00000018789/1-603 GAIQVADRVS SGKSSVVVHC SDGWDRTAQL TSLAMLMLDS FYRSIEGFEI BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 GAIQVADRVS SGKSSVVVHC SDGWDRTAQL TSLAMLMLDS YYRSIEGFEI 451 500 bmy_06472T0/1-513 LVQKEWISFG HKFAS----- ---------- ---------- ------FPTA ENSP00000359423/1-603 LVQKEWISFG HKFASRIGHG DKNHTDADRS PIFLQFIDCV WQMSKQFPTA ENSBTAP00000018789/1-603 LVQKEWISFG HKFASRIGHG DKNHADADRS PIFLQFIDCV WQMSKQFPTA BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 LVQKEWISLX XXXXXRIGHG DKNHADADRS PIFLQFVDCV WQMSKQFPTA 501 550 bmy_06472T0/1-513 FEFNERFLIV ILDHLYSCRF GTFLYNCESA REKQKVTERT VSLWSLINSN ENSP00000359423/1-603 FEFNEQFLII ILDHLYSCRF GTFLFNCESA RERQKVTERT VSLWSLINSN ENSBTAP00000018789/1-603 FEFNERFLIT ILDHLYSCRF GTFLYNCESA REKQKVTERT VSLWSLINSN BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 FEFNERFLII ILDHLYSCRF GTFLYNCESA REKQKVTERT VSLWSLINSN 551 600 bmy_06472T0/1-513 KDKFKNPFYT KEINRVLYPV ASMRHLELWV NYYIRWNPRI K-QQPNPVEQ ENSP00000359423/1-603 KEKFKNPFYT KEINRVLYPV ASMRHLELWV NYYIRWNPRI KQQQPNPVEQ ENSBTAP00000018789/1-603 KDKFKNPFYT KEINRVLYPV ASMRHLELWV NYYIRWNPRI KQQQPNPVEQ BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 KDKFKNPFYT KEINRVLYPV ASMRHLELWV NYYIRWNPRI KQQQPNPVEQ 601 650 bmy_06472T0/1-513 RYMELLALRD EYIKRLEELQ LANSPKLSDP STSPSSPSQM MPHKYYVYNM ENSP00000359423/1-603 RYMELLALRD EYIKRLEELQ LANSAKLSDP PTSPSSPSQM MPHVQTHF-- ENSBTAP00000018789/1-603 RYMELLALRD EYIKRLDELQ LANSAKLSDP SASPSSPSQM MPHVQTHF-- BACU007746/1-308 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002083/1-603 RYMELLALRD EYIKRLEELQ LANSPKLSDP STSPSSPSQM MPHVQTHF-- 651 700 bmy_06472T0/1-513 YFVGLIGTTT FLTKGEKIYV CEMDLPRTAY ILNAISNAVL FDI ENSP00000359423/1-603 ---------- ---------- ---------- ---------- --- ENSBTAP00000018789/1-603 ---------- ---------- ---------- ---------- --- BACU007746/1-308 ---------- ---------- ---------- ---------- --- ENSTTRP00000002083/1-603 ---------- ---------- ---------- ---------- ---