KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:42 2014 Check: 00 .. Name: BACU013314/1-166 Len: 397 Check: 9810 Weight: 1.00 Name: ENSP00000296525/1-329 Len: 397 Check: 5101 Weight: 1.00 Name: ENSBTAP00000018799/1-329 Len: 397 Check: 7568 Weight: 1.00 Name: bmy_03964T0/1-263 Len: 397 Check: 6525 Weight: 1.00 Name: ENSTTRP00000014260/1-329 Len: 397 Check: 7922 Weight: 1.00 // 1 50 BACU013314/1-166 MAPAEYCQTN RRVRSTFTDS INILSWRHRY QLIFSFRRTS CPAASRTGAR ENSP00000296525/1-329 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018799/1-329 ---------- ---------- ---------- ---------- ---------- bmy_03964T0/1-263 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014260/1-329 ---------- ---------- ---------- ---------- ---------- 51 100 BACU013314/1-166 HIRDLDLTKG GSSRAWAAMS VVEESRPFAQ QLSNVYFTIL SLFCFKLFVK ENSP00000296525/1-329 ---------- --------MS VLEENRPFAQ QLSNVYFTIL SLFCFKLFVK ENSBTAP00000018799/1-329 ---------- --------MS MVEENRPFAQ QLSNVYFTIL SLFCFKLFVK bmy_03964T0/1-263 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014260/1-329 ---------- --------MS VVEESRPFAQ QLSNVYFTIL SLFCFKLFVK 101 150 BACU013314/1-166 ISLAILSHFY IVKGNRKEAA RIAAEFYGVT QGQ------- ---------- ENSP00000296525/1-329 ISLAILSHFY IVKGNRKEAA RIAAEFYGVT QGQGSWADRS PLHEAASQGR ENSBTAP00000018799/1-329 ISLAILSHFY IVKGNRKEAA RIAAEFYGVT QGRGSWADRS PLHEAASQGR bmy_03964T0/1-263 ---------- ---------- ---------- ----SWADRS PLHEAASQGR ENSTTRP00000014260/1-329 ISLAILSHFY IVKGNRKEAA RIAAEFYGVT QGQGSWADRS PLHEAASQGR 151 200 BACU013314/1-166 ---------- ---------- ---------- ---------- ---------- ENSP00000296525/1-329 LLALRTLLSQ GYNVNAVTLD HVTPLHEACL GDHVACARTL LEAGANVNAI ENSBTAP00000018799/1-329 LLALRTLLSQ GYNVNAVTID HVTPLHEACL GDHVACARTL LQAGANVNAI bmy_03964T0/1-263 LLALRTLLSQ GYNVNAVTID HVTPLHEACL GDHVACARTL LQAGANVNAI ENSTTRP00000014260/1-329 LLALRTLLSQ GYNVNAVTID HVTPLHEACL GDHVACARTL LQAGANVNAI 201 250 BACU013314/1-166 ---------- ---------- ---------- ---------- ---------- ENSP00000296525/1-329 TIDGVTPLFN ACSQGSPSCA ELLLEYGAKA QLESCLPSPT HEAASKGHHE ENSBTAP00000018799/1-329 TIDGVTPLFN ACSQGSTSCT ELLLEYGAKP QLESCLPSPT HEAASKGHHE bmy_03964T0/1-263 TIDGVTPLFN ACSQGSPSCT ELLLEYGAKP QLESCLPSPT HEAASKGHHE ENSTTRP00000014260/1-329 TIDGVTPLFN ACSQGSPSCT ELLLEYGAKP QQESCLPSPT HEAASKGHHE 251 300 BACU013314/1-166 ---------- ---------- ------ALSQ QRY------- ------KADH ENSP00000296525/1-329 CLDILISWGI DVDQEIPHLG TPLYVACMSQ QFHCIWKLLY AGADVQKGKY ENSBTAP00000018799/1-329 CLEILISWGV DVDQDIPHLG TPLYVACMSQ QFHCVRKLLY AGADVQKGKY bmy_03964T0/1-263 CLEILISWGI DVDQDIPHLG TPLYVASMSQ QFHCVRKLLY TGADVQKGKY ENSTTRP00000014260/1-329 CLEILISWGI DVDQDIPHLG TPLYVASMSQ QFHCIRKLLY AGADVQKGKY 301 350 BACU013314/1-166 W--------- -------LLR LEVPQEYQLR EGEAYRVS-- ---------- ENSP00000296525/1-329 WDTPLHAAAQ QSSTEIVNLL LEFGADINAK NTELLRPIDV ATSSSMVERI ENSBTAP00000018799/1-329 WDTPLHAAAQ QSCTEIVNLL LEFGADINAK NTDLLRPVDV ATSNSLVERL bmy_03964T0/1-263 WDTPLHAAAQ QSCIEIVNLL LEFGADINAK NTELLRPVDV ATSSSLVERL ENSTTRP00000014260/1-329 WDTPLHAAAQ QSCIEIINLL LEFGADVNAR NTELLRPVDV ATSSSLVERL 351 400 BACU013314/1-166 ---------- ---------- ---------- ---------- ------- ENSP00000296525/1-329 LLQHEATPSS LYQLCRLCIR SYIGKPRLHL IPQLQLPTLL KNFLQYR ENSBTAP00000018799/1-329 LLQHEATPSS LCQLCRLCIR NYIGRPRLHL IPQLQLPTLL QNFLQYR bmy_03964T0/1-263 LLQHEATPSS LCQLCRLCIR NYIGRPRLHL IPQLQLPTLL QNFLQYR ENSTTRP00000014260/1-329 LLQHEATPSS LCQLCRLCIR NYIGRPRLHL IPQLQLPTLL QNFLQYR