KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:05:44 2014  Check: 00 ..

 Name: ENSBTAP00000018803/1-181  Len:    181  Check:  2467  Weight:  1.00
 Name: bmy_03962T0/1-135         Len:    181  Check:  9709  Weight:  1.00
 Name: ENSP00000427463/1-180     Len:    181  Check:  6660  Weight:  1.00
 Name: ENSTTRP00000014261/1-132  Len:    181  Check:  741  Weight:  1.00
 Name: BACU020278/1-132          Len:    181  Check:  996  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000018803/1-181  MNTVLSRANS LFAFSLSVMA ALTFGCFITT AFKDRSVPVR LHVSRIMLKN 
bmy_03962T0/1-135         MLLCLKDGET IIFISR---- ---------- ---------- --------KN 
ENSP00000427463/1-180     MNTVLSRANS LFAFSLSVMA ALTFGCFITT AFKDRSVPVR LHVSRIMLKN 
ENSTTRP00000014261/1-132  ---------- ---------- ---------- ---------- --------KN 
BACU020278/1-132          ---------- ---------- ---------- ---------- --------KN 


                          51                                                 100
ENSBTAP00000018803/1-181  VEDFTGPRER SDLGFITFDI TADIQNIFDW NVKQLFLYLS AEYSTKNNAL 
bmy_03962T0/1-135         VEDFTGPRER SDLGFITFDI TADI--LF-- --RKYFIALS L-------AL 
ENSP00000427463/1-180     VEDFTGPRER SDLGFITFDI TADLENIFDW NVKQLFLYLS AEYSTKNNAL 
ENSTTRP00000014261/1-132  VEDFTGPRER SDLGFITFDI TADLENIFDW NVKQLFLYLS AEYSTKNNAL 
BACU020278/1-132          VEDFTGPRER SDLGFITFDI TADIQNIFDW NVKQLFLYLS AEYSTKNNAL 


                          101                                                150
ENSBTAP00000018803/1-181  NQVVLWDKIV LRGDNPKLLL KDMKTKYFFF DDGNGLNFGK NFKLHFAWNY 
bmy_03962T0/1-135         NQVVLWDKIV LRGDNPKLLL KDMKTKYFFF DDGNGLKGNR NVTLTLSWNV 
ENSP00000427463/1-180     NQVVLWDKIV LRGDNPKLLL KDMKTKYFFF DDGNGLKGNR NVTLTLSWNV 
ENSTTRP00000014261/1-132  NQVVLWDKIV LRGDNPKLLL KDMKTKYFFF DDGNGLKGNR NVTLTLSWNV 
BACU020278/1-132          NQVVLWDKIV LRGDNPKLLL KDMKTKYFFF DDGNGLKGNR NVTLTLSWNV 


                          151                                                200
ENSBTAP00000018803/1-181  VPRRIAVLLG LHHGFIFTFF PHPLEFTLKA Y 
bmy_03962T0/1-135         VPNAGILPLV TGSGHVSVPF PDTYEIT-KS Y 
ENSP00000427463/1-180     VPNAGILPLV TGSGHVSVPF PDTYEIT-KS Y 
ENSTTRP00000014261/1-132  VPNAGILPLV TGSGHVSVPF PDTYEIT-KS Y 
BACU020278/1-132          VPNAGILPLV TGSGHVSVPF PDTYEIT-KS Y