KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:45 2014 Check: 00 .. Name: ENSP00000291547/1-436 Len: 507 Check: 9327 Weight: 1.00 Name: bmy_14092T0/1-469 Len: 507 Check: 2944 Weight: 1.00 Name: ENSBTAP00000018809/1-436 Len: 507 Check: 8604 Weight: 1.00 Name: ENSTTRP00000009416/1-436 Len: 507 Check: 9102 Weight: 1.00 Name: BACU004388/1-436 Len: 507 Check: 9040 Weight: 1.00 // 1 50 ENSP00000291547/1-436 -----MMATQ TLSI------ --------DS YQDGQQ---- ---------- bmy_14092T0/1-469 MLLCFCLPRH RLLLTQDDLM FYKELTHHDG YTDVEHRQLS RWATMITFRH ENSBTAP00000018809/1-436 -----MMATQ TLSI------ --------DS YPDGQQ---- ---------- ENSTTRP00000009416/1-436 -----MMATQ TLSI------ --------DS YQDGQQ---- ---------- BACU004388/1-436 -----MMAAQ TLSI------ --------DS YQDAQQ---- ---------- 51 100 ENSP00000291547/1-436 ---------- ---------- ---------- --------MQ VVTELKTEQD bmy_14092T0/1-469 SLLRVRLPPA GPCPDAGSPG QGWAQRGKGL ACNGSALPMQ VVTELKTEQD ENSBTAP00000018809/1-436 ---------- ---------- ---------- --------MQ VVTELKTEQD ENSTTRP00000009416/1-436 ---------- ---------- ---------- --------MQ VVTELKTEQD BACU004388/1-436 ---------- ---------- ---------- --------MQ VVTELKTEQD 101 150 ENSP00000291547/1-436 PNCSEPDAEG VSPPPVESQT PMDVDKQAIY RHPLFPLLAL LFEKCEQSTQ bmy_14092T0/1-469 PTCSEPDVEG VSPPPVGSQT PMDADKQAIY ---------- ---------- ENSBTAP00000018809/1-436 PNCSEPDVEG VSPPPVGSQT PMDADKQAIY RHPLFPLLAL LFEKCEQSTQ ENSTTRP00000009416/1-436 PTCSEPDVEG VSPPPVGSQT PMDADKQAIY RHPLFPLLAL LFEKCEQSTQ BACU004388/1-436 PTCSEPDVEG VSPPPVGSQT PMDADKQAIY RHPLFPLLAL LFEKCEQSTQ 151 200 ENSP00000291547/1-436 GSEGTTSASF DVDIENFVRK QEKEGKPFFC EDPETDNLMV KAIQVLRIHL bmy_14092T0/1-469 ---------- --------RK QEKEGKPFFC EDPETDNLMV KAIQVLRIHL ENSBTAP00000018809/1-436 GSEGTTSASF DVDIENFVRK QEKEGKPFFC EDPETDNLMV KAIQVLRIHL ENSTTRP00000009416/1-436 GSEGTTSASF DVDIESFVRR QEKEGKPFFC EDPETDNLMV KAIQVLRIHL BACU004388/1-436 GSEGTTSASF DVDIENFVRK QEKEGKPFFC EDPETDNLMV KAIQVLRIHL 201 250 ENSP00000291547/1-436 LELEKVNELC KDFCSRYIAC LKTKMNSETL LSGEPGSPYS PVQSQQIQSA bmy_14092T0/1-469 LELEKVNELC KDFCSRYIAC LKTKMNSETL LSGEPGSPYS PVQSQQIQSA ENSBTAP00000018809/1-436 LELEKVNELC KDFCSRYIAC LKTKMNSETL LSGEPGSPYS PVQSQQIQSA ENSTTRP00000009416/1-436 LELEKVNELC KDFCSRYIAC LKTKMNSETL LSGEPGSPYS PVQSQQVQSA BACU004388/1-436 LELEKVNELC KDFCSRYIAC LKTKMNSETL LSGEPGSPYS PVQSQQTQSA 251 300 ENSP00000291547/1-436 ITGTISPQGI VVPASALQQG NVAMATVAGG TVYQPVTVVT PQGQVVTQTL bmy_14092T0/1-469 ITGTLSPQGI VVPASALQQG NVTMATVAGG TVYQPVTVVT PQGQVVTQAL ENSBTAP00000018809/1-436 ITGTLSPQGI VVPASALQQG NVTMATVAGG TVYQPVTVVT PQGQVVTQAL ENSTTRP00000009416/1-436 ITGTLSPQGI VVPASALQQG SVTMATVAGG TVYQPVTVVT PQGQVVTQAL BACU004388/1-436 IAGTLSPQGI VVPAPALPQG SVTMATVAGG TVYQPVTVVT PQGQVVTQAL 301 350 ENSP00000291547/1-436 SPGTIRIQNS QLQLQLNQDL SILHQDDGSS KNKRGVLPKH ATNVMRSWLF bmy_14092T0/1-469 SPGTIRIQNS QLQLQLNQDL SILHQDDGSS KNKRGVLPKH ATSVMRSWLF ENSBTAP00000018809/1-436 SPGTIRIQNS QLQLQLNQDL SILHQDDGSS KNKRGVLPKH ATNVMRSWLF ENSTTRP00000009416/1-436 SPGTIRIQNS QLQLQLNQDL SILHQDDGSS KNKRGVLPKH ATNVMRSWLF BACU004388/1-436 SPGTIRIQNS QLQLQLNQDL SILHQDDGSS KNKRGVLPKH ATSVMRSWLF 351 400 ENSP00000291547/1-436 QHIGHPYPTE DEKKQIAAQT NLTLLQVNNW FINARRRILQ PMLDSSCSET bmy_14092T0/1-469 QHIGHPYPTE DEKKQIAAQT NLTLLQVNNW FINARRRILQ PMLDSSCSET ENSBTAP00000018809/1-436 QHIGHPYPTE DEKKQIAAQT NLTLLQVNNW FINARRRILQ PMLDSSCSET ENSTTRP00000009416/1-436 QHIGHPYPTE DEKKQIAAQT NLTLLQVNNW FINARRRILQ PMLDSSCSET BACU004388/1-436 QHIGHPYPTE DEKKQIAAQT NLTLLQVNNW FINARRRILQ PMLDSSCSET 401 450 ENSP00000291547/1-436 PKTKKKTAQN RPVQRFWPDS IASGVAQPPP SELTMSEGAV VTITTPVNMN bmy_14092T0/1-469 PKTKKKTAQN RPVQRFWPDS IASGAAQPAA SELTMSEGAV VTITAPVSMN ENSBTAP00000018809/1-436 PKTKKKTAQN RPVQRFWPDS IASGAAQPAA SELTVSEGAV VTITAPVSMN ENSTTRP00000009416/1-436 PKTKKKTAQN RPVQRFWPDS IASGAAQPAA SELTVSEGAV VTITAPVGMN BACU004388/1-436 PKTKKKTAQN RPVQRFWPDS IASGAAQPAA SELTVSEGAV VTITAPVSMN 451 500 ENSP00000291547/1-436 VDSLQSLSSD GATLAVQQVM MAGQSEDESV DSTEEDAGAL APAHISGLVL bmy_14092T0/1-469 VDSLQSLSSD GATLAVQQVM MAEQSEDDSV DSTGDGGAAL APGHLGGLVL ENSBTAP00000018809/1-436 VDSLQSLSSD GATLAVQQVM MAEQSEDDSV DSTGDGGAAL APGHLGGLVL ENSTTRP00000009416/1-436 VDSLQSLSSD GATLAVQQVM MAEQSEDDSV DSTGDGGAAL APGHLGGLVL BACU004388/1-436 VDSLQSLSSD GATLAVQQVM MAEQSEDDSV DSTGDGGAAL APSHLGGLVL 501 550 ENSP00000291547/1-436 ENSDSLQ bmy_14092T0/1-469 ENSDSLQ ENSBTAP00000018809/1-436 ENSDSLQ ENSTTRP00000009416/1-436 ENSDSLQ BACU004388/1-436 ENSDSLQ