KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:05:45 2014 Check: 00 .. Name: ENSP00000295622/1-536 Len: 693 Check: 2931 Weight: 1.00 Name: ENSBTAP00000018814/1-397 Len: 693 Check: 4959 Weight: 1.00 Name: ENSTTRP00000014625/1-457 Len: 693 Check: 2157 Weight: 1.00 Name: bmy_17391T0/1-497 Len: 693 Check: 6455 Weight: 1.00 Name: BACU009309/1-597 Len: 693 Check: 4358 Weight: 1.00 // 1 50 ENSP00000295622/1-536 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000018814/1-397 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014625/1-457 ---------- ---------- ---------- ---------- ---------- bmy_17391T0/1-497 SGRAPPLTSR HPPASARAPG RAGARRSKQS PRVLLSRALR RSPRLPGPAP BACU009309/1-597 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000295622/1-536 ---------- -----MEEPP QEALAEPLKH ESPAAPSSAG HTKGQEEDDQ ENSBTAP00000018814/1-397 ---------- ----KMEKPP EEAPTESSEI QRPAKTPDDR HTDGQ-EDSR ENSTTRP00000014625/1-457 ---------- -----MEKPP EEAPAKSSEN QSTAKSPNDS HTDSP-EDNR bmy_17391T0/1-497 PTASGNLDQS GTRQKMEEPP EGAPAESSEN QSTAKSPNDS HTDSQ-EDNR BACU009309/1-597 ---------- -----MEEPP EGASAESSEN QSTAKSPNDS HTDSQ-EDNR 101 150 ENSP00000295622/1-536 KNQAERKADN HTAHRIADQT ALRVPSQAES SIFSQATNGV AEQNGHSTPG ENSBTAP00000018814/1-397 QN-------- ---------- ---------- ---------- ---------- ENSTTRP00000014625/1-457 QNQDEVEADD QTDHGAADQA AQIVSALAEP NVVNQADHKA CESMGERTSD bmy_17391T0/1-497 QNQDEVEADD RTDHRAADQA AQIVSGLAEP NVVNQADHKA YESMGERTSD BACU009309/1-597 QNQDEVEADD RTDHRAAAQA AQIVSGLAEP NVVNQADHKA YESMGERTSD 151 200 ENSP00000295622/1-536 QAGRRASNPA -DVSDLRADD QVNQTPSEQT KGKASSQANN V-QHEQSDGQ ENSBTAP00000018814/1-397 ---------- ----HGRTSD QADQRMSEEM DSKASSQADG V-RSEHTDNQ ENSTTRP00000014625/1-457 RADLRASNHA HHVAHRRASD QVNRSMSEQM DDKASSQAGG VEESEQTDSQ bmy_17391T0/1-497 QADLRASNHA -NVADRRASD QVNRSMSEQM DSKASSQAGG V-ESEQTDSQ BACU009309/1-597 QADLRAPNRA -NVADRRASD QVNRSMSEQM DSTASSQAGG V-ESEQTDSQ 201 250 ENSP00000295622/1-536 VSGLTEERTA EQTERRLPTQ AERRTSG--- ---------- ---------- ENSBTAP00000018814/1-397 MSALPEQGTY EQTEQRT--- ---------- ---------- ---------- ENSTTRP00000014625/1-457 MSALPERGTS EQTEQRASEQ IDHRM----- ---------- ---------- bmy_17391T0/1-497 MSALPEQGTS EQTERRASEQ IDHRM----- ---------- ---------- BACU009309/1-597 MSALPEQGTS EQTERRASEQ IDHRMSSLAE RRASEEIGRK PSVPSLQRAS 251 300 ENSP00000295622/1-536 ---------- ---------- ---------- ---------- ---------Q ENSBTAP00000018814/1-397 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014625/1-457 ---------- ---------- ---------- ---------- ---------- bmy_17391T0/1-497 ---------- ---------- ---------- ---------- ---------- BACU009309/1-597 EQSDHRMSSL AERRASEEID RKPSVPSLQR ASEQSDHRTS SLAERRASEE 301 350 ENSP00000295622/1-536 IDGRLAMPSD QRGSRQTDHR MAGQSERRAS EQMDRRMSGE AERRTSEQIT ENSBTAP00000018814/1-397 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014625/1-457 ---------- ---------- ---------- ---------- ---------- bmy_17391T0/1-497 ---------- ---------- ---------- ---------- ---------- BACU009309/1-597 IDRKPSVPSL QRASEQSDHR TSSLAERRAS EEIDRKPSVP SLQRASEQSD 351 400 ENSP00000295622/1-536 HRLSKLSERR PSVQIDSGSS VPSDQSPSVQ IDSGSSVPSD QRPSVQIDRR ENSBTAP00000018814/1-397 ---SSLAERI ASEQFDQKPS VPSLQRAHGR SDHRMPRPGD QRTAQQIESR ENSTTRP00000014625/1-457 ---SSLAERR ASEEIDCKPS VPSLQRASEQ SDHRMSRPAD RRASQQIESR bmy_17391T0/1-497 ---SGLTERR ASEQIDRKPS LLSLQRASEQ SDHRMSCPAD QRTSQQIESR BACU009309/1-597 HRTSSLAERR ASEEIDREPS VPSLQRASEQ SDHRMSSPAD QRTSQQIESR 401 450 ENSP00000295622/1-536 MSGKVRRRSS EKTDYRLAGL ADPGTSEQTD LRLYGLVDHK TSVKTHHQVY ENSBTAP00000018814/1-397 LSGLIEKKTY EQIDQRSS-- ---------- ----DQVDHK RASKTHLKVH ENSTTRP00000014625/1-457 LSGLVEGKTS EQIDHRLS-- ---------- ----DQVDHR TSVKTHHEVY bmy_17391T0/1-497 LFGLVERKTS EQIDHRLS-- ---------- ----DQVDYR TSGKTHRKVY BACU009309/1-597 YSGLVERKTS EQIDHRLS-- ---------- ----DQVDHR TSVKTHRKVY 451 500 ENSP00000295622/1-536 GQATELAEHQ AIDQAHSNAD QPPVDNAHYT ESDQTDHLAD RQANH-KDQL ENSBTAP00000018814/1-397 DQTTKPAEHP ETDSDKAGG- ---------- ESDQTDDLLD EEDDYTEDNL ENSTTRP00000014625/1-457 DQATKPSEHQ AADPDKAGS- ---------- ESDQADDLVE EEDDYTEDNL bmy_17391T0/1-497 DQATKPAEQQ AADPDKAGS- ---------- ESDQVDDLVE KEDDYTEDNL BACU009309/1-597 DQATKPAEHQ AADPDKAGS- ---------- ESDQVDDLVE EEDDYTEDNM 501 550 ENSP00000295622/1-536 SYYETRGQSE DRIFPQLGNS KEDKEADYRV QPCKFEDSQV DLN-SKPSVE ENSBTAP00000018814/1-397 FDY--REQSN DEVFRQLGYG KEEEEDDFKV QPCKFEPSQT DASVSNTSIE ENSTTRP00000014625/1-457 FDYGACSRSD DRLFHQLGCS KEDKEADFRV QPCKFEPGQT DGSITKASLE bmy_17391T0/1-497 FDYGERSRSD DRLFDQLGYS KEDKEADFRV QPCKFEPGQT DGSISKASLE BACU009309/1-597 FDYVERSRSD DRLFDQLGYS KEDKEADFRV QPCKFEPGQT DGSISKASLE 551 600 ENSP00000295622/1-536 METQNATTIP PYNPVDARFT SNFQAKDQAL FPRLPSISSK LNYTSSQEKT ENSBTAP00000018814/1-397 SDTESVADLR VFMPFDN--- STFQTKEQAY SEKFPSISSK LDYIISREKP ENSTTRP00000014625/1-457 TETESVADLP AFIPFDHGLT STSQTKDQAY SPRFPSISSK LDYIISQEKT bmy_17391T0/1-497 TETESVADLQ AFIPFDHRLT STFQTKDRAY SQRFPSISSK LDYIVSQEKT BACU009309/1-597 TETESVADLQ GFIPFDHRST STFQTKDRAC SQRFPSISSK LDYIISQEKT 601 650 ENSP00000295622/1-536 QAIVTKSDEF SEIDQGKGYH IRNQTY-RRF PSIVYEDPYQ VSLQYMEKHH ENSBTAP00000018814/1-397 QPTEVEPDDF SSYQERRISD AYSQPYKRRF PPIVYEDPYQ VSLRYMEKHH ENSTTRP00000014625/1-457 QPVETKPVDI SEYQERRSFQ AYNQPYKKQL PPIVHEDPYQ VSLRYVEKHH bmy_17391T0/1-497 QPVETKPVDI SEYQERRSFQ AYNQPYKKWF PPIVYEDPYQ VSLRYMEKHH BACU009309/1-597 QPVKTKPVDI SEYQERRSFQ AYNQPSKKRL PPIVYEDPYQ ISLQYMEKHH 651 700 ENSP00000295622/1-536 ILQIFQQITE NLVYEKPEDP LNFMLCQV-- ---------- --- ENSBTAP00000018814/1-397 ILQIFQQITE NLVYEKPEDP LNFMLCQVWN FFIIKYSTHT SVQ ENSTTRP00000014625/1-457 IL-IFQQITE KLVYEKPEDP LSFMLCQVW- ---------- --- bmy_17391T0/1-497 ILQIF----- ---------- ---------- ---------- --- BACU009309/1-597 ILQIFQHITE NLVYEKPEDP LSFMLCQVWN RKKRTSLLFR SL-